Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_P04
         (535 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...   236   3e-64
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   6.4  
DQ370035-1|ABD18596.1|   93|Anopheles gambiae defensin protein.        23   6.4  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   6.4  

>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score =  236 bits (578), Expect = 3e-64
 Identities = 108/166 (65%), Positives = 124/166 (74%)
 Frame = +1

Query: 37  MGAYRYIQELYRKKLSDVMRFLLRIRVWQYRQLTRMHRAPRPTMPDKARRLGYRAKQGYV 216
           MGAYRY+QELYRKK SDVMR+LLR+R WQYRQ+TR HRAPRP  P + RRLGY+AK G+ 
Sbjct: 1   MGAYRYVQELYRKKQSDVMRYLLRVRAWQYRQMTRFHRAPRPWRPTRLRRLGYKAKTGFS 60

Query: 217 IFRIXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXNSYW 396
           IFRI               TYGKPKSHGVNQLKP R LQS+AEE            NSYW
Sbjct: 61  IFRIRVRCGGRKRPVHKGCTYGKPKSHGVNQLKPYRCLQSVAEERVGGRLGGLRVLNSYW 120

Query: 397 VAQDSSYKYFEVILIDPSHNAIRRDPKITWIVNAVHKHREMRGLTS 534
           VAQD+++KYFEVI++DP +NAIRRDP + WI NAVHKHRE+RGLTS
Sbjct: 121 VAQDAAHKYFEVIMVDPPNNAIRRDPNVNWICNAVHKHRELRGLTS 166


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 206 CLARYPSLLALSGIVGLGARCIRVNW 129
           C +RYPS+        L A CIRV++
Sbjct: 82  CSSRYPSVALNMNQPTLEALCIRVSF 107


>DQ370035-1|ABD18596.1|   93|Anopheles gambiae defensin protein.
          Length = 93

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +2

Query: 329 CSLLLRSVLVAGVVVYACLIHTG*HRTLHTNTLKLF 436
           C ++++S + A V+   C I          +T KLF
Sbjct: 10  CIIIMKSFIAAAVIALICAIAVSGTTVTLQSTCKLF 45


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 24  QTRQDGRVQIYTGVV*EKVERC 89
           Q   +GR Q   GV  EK +RC
Sbjct: 408 QCNAEGRCQCKPGVTGEKCDRC 429


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 569,897
Number of Sequences: 2352
Number of extensions: 10742
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49474503
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)