Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_P04
         (535 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094841-1|AAM11194.1|  204|Drosophila melanogaster RE01373p pro...   252   2e-67
AF030251-1|AAB84223.1|  204|Drosophila melanogaster ribosomal L1...   252   2e-67
BT010007-1|AAQ22476.1| 1425|Drosophila melanogaster RE28166p pro...    28   9.2  
AF184230-1|AAD55741.1|  655|Drosophila melanogaster BcDNA.LD2812...    28   9.2  
AE014298-2834|AAF48949.1|  655|Drosophila melanogaster CG8062-PA...    28   9.2  

>AY094841-1|AAM11194.1|  204|Drosophila melanogaster RE01373p
           protein.
          Length = 204

 Score =  252 bits (617), Expect = 2e-67
 Identities = 118/166 (71%), Positives = 129/166 (77%)
 Frame = +1

Query: 37  MGAYRYIQELYRKKLSDVMRFLLRIRVWQYRQLTRMHRAPRPTMPDKARRLGYRAKQGYV 216
           MGAYRY+QELYRKK SDVMR+LLRIRVWQYRQLT++HR+PRPT PDKARRLGYRAKQG+V
Sbjct: 1   MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGFV 60

Query: 217 IFRIXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXNSYW 396
           I+RI               TYGKPKSHGVNQLKP R LQSIAEE            NSYW
Sbjct: 61  IYRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYW 120

Query: 397 VAQDSSYKYFEVILIDPSHNAIRRDPKITWIVNAVHKHREMRGLTS 534
           +AQD+SYKYFEVILID  H+AIRRDPKI WI   VHKHRE+RGLTS
Sbjct: 121 IAQDASYKYFEVILIDTHHSAIRRDPKINWICKHVHKHRELRGLTS 166


>AF030251-1|AAB84223.1|  204|Drosophila melanogaster ribosomal L15
           (YL10) protein homologueprotein.
          Length = 204

 Score =  252 bits (617), Expect = 2e-67
 Identities = 118/166 (71%), Positives = 129/166 (77%)
 Frame = +1

Query: 37  MGAYRYIQELYRKKLSDVMRFLLRIRVWQYRQLTRMHRAPRPTMPDKARRLGYRAKQGYV 216
           MGAYRY+QELYRKK SDVMR+LLRIRVWQYRQLT++HR+PRPT PDKARRLGYRAKQG+V
Sbjct: 1   MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGFV 60

Query: 217 IFRIXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXNSYW 396
           I+RI               TYGKPKSHGVNQLKP R LQSIAEE            NSYW
Sbjct: 61  IYRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYW 120

Query: 397 VAQDSSYKYFEVILIDPSHNAIRRDPKITWIVNAVHKHREMRGLTS 534
           +AQD+SYKYFEVILID  H+AIRRDPKI WI   VHKHRE+RGLTS
Sbjct: 121 IAQDASYKYFEVILIDTHHSAIRRDPKINWICKHVHKHRELRGLTS 166


>BT010007-1|AAQ22476.1| 1425|Drosophila melanogaster RE28166p protein.
          Length = 1425

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +1

Query: 55   IQELYRKKLSDVMRFLLRIRVWQYRQLTRMHRAPRPTMPD 174
            ++E+ R+   +    L RIR   Y  ++R H+ P P +PD
Sbjct: 919  VREIIREMRENQTPELERIRRQAYTPVSRKHQRPAPGIPD 958


>AF184230-1|AAD55741.1|  655|Drosophila melanogaster BcDNA.LD28120
           protein.
          Length = 655

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -2

Query: 339 NRLQVASGFQLVDTMALGFAVGSSLG 262
           NRL  ASG QL+      FA+G  LG
Sbjct: 585 NRLPAASGLQLIFNTIFSFAMGPILG 610


>AE014298-2834|AAF48949.1|  655|Drosophila melanogaster CG8062-PA
           protein.
          Length = 655

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -2

Query: 339 NRLQVASGFQLVDTMALGFAVGSSLG 262
           NRL  ASG QL+      FA+G  LG
Sbjct: 585 NRLPAASGLQLIFNTIFSFAMGPILG 610


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,941,619
Number of Sequences: 53049
Number of extensions: 482648
Number of successful extensions: 1170
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1170
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2012211456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)