Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_P01
         (475 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC030781-1|AAH30781.1|  900|Homo sapiens chromosome 1 open readi...    31   2.7  
AL356273-3|CAI22095.1|  900|Homo sapiens chromosome 1 open readi...    31   2.7  
AL136133-3|CAI17940.1|  900|Homo sapiens chromosome 1 open readi...    31   2.7  
AK000128-1|BAA90960.1|  261|Homo sapiens protein ( Homo sapiens ...    31   2.7  
AF288392-1|AAG60612.1|  900|Homo sapiens C1orf26 protein.              31   2.7  

>BC030781-1|AAH30781.1|  900|Homo sapiens chromosome 1 open reading
           frame 26 protein.
          Length = 900

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 22/52 (42%), Positives = 25/52 (48%)
 Frame = +3

Query: 90  FISINIERFTFITVVRKRAPNNSSFENLVKRKQHLFDLKKKSCQSIL*FSSS 245
           F  +N    TF  V  K  PN+S  EN V +KQ    LK    Q I  FSSS
Sbjct: 695 FAQVNNLLQTFAEVKTKLKPNSS--ENTVTKKQEGTSLKNSHNQEITVFSSS 744


>AL356273-3|CAI22095.1|  900|Homo sapiens chromosome 1 open reading
           frame 26 protein.
          Length = 900

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 22/52 (42%), Positives = 25/52 (48%)
 Frame = +3

Query: 90  FISINIERFTFITVVRKRAPNNSSFENLVKRKQHLFDLKKKSCQSIL*FSSS 245
           F  +N    TF  V  K  PN+S  EN V +KQ    LK    Q I  FSSS
Sbjct: 695 FAQVNNLLQTFAEVKTKLKPNSS--ENTVTKKQEGTSLKNSHNQEITVFSSS 744


>AL136133-3|CAI17940.1|  900|Homo sapiens chromosome 1 open reading
           frame 26 protein.
          Length = 900

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 22/52 (42%), Positives = 25/52 (48%)
 Frame = +3

Query: 90  FISINIERFTFITVVRKRAPNNSSFENLVKRKQHLFDLKKKSCQSIL*FSSS 245
           F  +N    TF  V  K  PN+S  EN V +KQ    LK    Q I  FSSS
Sbjct: 695 FAQVNNLLQTFAEVKTKLKPNSS--ENTVTKKQEGTSLKNSHNQEITVFSSS 744


>AK000128-1|BAA90960.1|  261|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20121 fis, clone COL05942. ).
          Length = 261

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 22/52 (42%), Positives = 25/52 (48%)
 Frame = +3

Query: 90  FISINIERFTFITVVRKRAPNNSSFENLVKRKQHLFDLKKKSCQSIL*FSSS 245
           F  +N    TF  V  K  PN+S  EN V +KQ    LK    Q I  FSSS
Sbjct: 56  FAQVNNLLQTFAEVKTKLKPNSS--ENTVTKKQEGTSLKNSHNQEITVFSSS 105


>AF288392-1|AAG60612.1|  900|Homo sapiens C1orf26 protein.
          Length = 900

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 22/52 (42%), Positives = 25/52 (48%)
 Frame = +3

Query: 90  FISINIERFTFITVVRKRAPNNSSFENLVKRKQHLFDLKKKSCQSIL*FSSS 245
           F  +N    TF  V  K  PN+S  EN V +KQ    LK    Q I  FSSS
Sbjct: 695 FAQVNNLLQTFAEVKTKLKPNSS--ENTVTKKQEGTSLKNSHNQEITVFSSS 744


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,646,502
Number of Sequences: 237096
Number of extensions: 1031752
Number of successful extensions: 1600
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1600
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4156838854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)