Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_O23
         (287 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U20285-1|AAC50906.2|  500|Homo sapiens Gps1 protein.                   30   1.6  
BT009834-1|AAP88836.1|  475|Homo sapiens G protein pathway suppr...    30   1.6  
BC064503-1|AAH64503.1|  527|Homo sapiens G protein pathway suppr...    30   1.6  
BC000155-1|AAH00155.3|  491|Homo sapiens G protein pathway suppr...    30   1.6  
AY045575-1|AAK92217.1| 4624|Homo sapiens axonemal dynein heavy c...    29   3.6  

>U20285-1|AAC50906.2|  500|Homo sapiens Gps1 protein.
          Length = 500

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +1

Query: 229 YLVENPTLDLETYAGS 276
           Y+VENP+LDLE YA S
Sbjct: 48  YVVENPSLDLEQYAAS 63


>BT009834-1|AAP88836.1|  475|Homo sapiens G protein pathway
           suppressor 1 protein.
          Length = 475

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +1

Query: 229 YLVENPTLDLETYAGS 276
           Y+VENP+LDLE YA S
Sbjct: 19  YVVENPSLDLEQYAAS 34


>BC064503-1|AAH64503.1|  527|Homo sapiens G protein pathway
           suppressor 1 protein.
          Length = 527

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +1

Query: 229 YLVENPTLDLETYAGS 276
           Y+VENP+LDLE YA S
Sbjct: 75  YVVENPSLDLEQYAAS 90


>BC000155-1|AAH00155.3|  491|Homo sapiens G protein pathway
           suppressor 1 protein.
          Length = 491

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +1

Query: 229 YLVENPTLDLETYAGS 276
           Y+VENP+LDLE YA S
Sbjct: 35  YVVENPSLDLEQYAAS 50


>AY045575-1|AAK92217.1| 4624|Homo sapiens axonemal dynein heavy chain
            DNAH5 protein.
          Length = 4624

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +3

Query: 102  QWNPIIFTYIKFQRRKMFEMNAAEPMQVDVPLEDNENNET 221
            QW+  + +  K Q RKM  + + E    DV + +NE  +T
Sbjct: 1050 QWSSELLSKKKIQERKMAALQSNEDSDSDVEMGENELQDT 1089


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,262,496
Number of Sequences: 237096
Number of extensions: 646908
Number of successful extensions: 1293
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1293
length of database: 76,859,062
effective HSP length: 72
effective length of database: 59,788,150
effective search space used: 1375127450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)