Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_O19
(593 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 243 7e-65
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 200 9e-52
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 198 2e-51
01_01_0682 - 5244805-5244919,5246468-5246613,5246813-5246994,524... 195 2e-50
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 194 6e-50
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 191 3e-49
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 184 4e-47
08_01_0397 - 3509186-3510291,3510322-3512335 181 4e-46
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 165 2e-41
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 165 2e-41
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 163 9e-41
07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194... 155 3e-38
12_02_1076 - 25862671-25863159,25863290-25863451,25863614-258638... 154 4e-38
06_03_1255 + 28780181-28781172,28782065-28782932 148 4e-36
03_05_0865 - 28365430-28367640 146 1e-35
07_01_0322 - 2258067-2258519,2258620-2258781,2258896-2259159,225... 137 5e-33
03_06_0531 + 34552206-34552598,34552665-34552735,34553363-345533... 132 2e-31
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 127 6e-30
09_05_0008 + 20042390-20042845,20043323-20043457,20043539-200436... 125 2e-29
03_06_0344 - 33276366-33276548,33277044-33277169,33277254-332773... 118 4e-27
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 117 8e-27
03_05_0619 - 26180980-26181105,26181329-26181417,26181518-261816... 112 2e-25
01_01_0447 - 3327727-3328144,3328438-3328688,3328820-3328909,332... 112 2e-25
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 111 3e-25
06_03_0337 + 19678152-19678484,19678616-19678801,19679232-196794... 111 5e-25
07_03_1566 + 27766336-27766393,27766480-27766609,27766728-277667... 110 7e-25
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 109 2e-24
05_01_0079 + 531617-531734,531987-532059,532152-532261,532400-53... 109 2e-24
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 107 7e-24
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 106 1e-23
07_03_1392 - 26238885-26239007,26239137-26239235,26239636-262397... 105 2e-23
01_05_0722 + 24598426-24598649,24599113-24599219,24599319-245993... 105 3e-23
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 104 5e-23
06_03_0287 - 19168685-19168735,19168847-19168884,19169517-191697... 102 2e-22
01_01_0602 - 4484972-4485450,4485949-4485997,4486108-4486237,448... 102 2e-22
02_05_1293 - 35520733-35520963,35521696-35521878,35522040-355222... 99 2e-21
01_05_0721 + 24594815-24594834,24595207-24595313,24595417-245954... 98 4e-21
02_01_0355 + 2558792-2558862,2558993-2559099,2559185-2559615,256... 91 8e-19
03_05_0052 - 20293197-20293310,20293938-20294024,20294133-202942... 89 2e-18
01_06_0020 + 25630728-25631023,25631308-25631548,25631629-256317... 89 2e-18
06_03_1284 - 28988287-28988922,28989335-28989765,28989850-289899... 89 3e-18
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 86 2e-17
02_05_0064 - 25529630-25531440,25531663-25531673,25533113-255331... 79 2e-15
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 79 3e-15
03_02_0189 - 6253659-6255380 79 3e-15
01_05_0295 + 20537147-20537291,20539111-20539283,20539365-205395... 78 5e-15
01_05_0296 + 20567259-20567386,20568895-20569123,20569205-205694... 78 6e-15
07_03_0601 - 19872780-19873099,19873148-19873151,19874196-198743... 76 2e-14
01_07_0333 - 42813789-42814073,42814229-42814315,42815083-428151... 71 5e-13
02_01_0381 - 2764331-2764342,2768966-2769907 69 4e-12
02_02_0099 + 6768115-6768285,6769950-6770034,6770501-6770628,677... 63 2e-10
02_05_1067 - 33858215-33858321,33858422-33858527,33859014-338592... 58 4e-09
03_05_0997 + 29565311-29565664,29566134-29566298,29566572-295666... 56 2e-08
03_01_0399 + 3097878-3098141,3098254-3098547,3098659-3098886,309... 52 5e-07
10_08_0429 + 17845303-17845431,17845508-17845684,17845782-178458... 46 2e-05
03_01_0059 + 484305-484617,484919-485406,485608-486092,486185-48... 45 5e-05
09_03_0167 + 12965030-12965356,12966100-12966387,12966704-129668... 42 5e-04
09_02_0405 - 8597807-8598045,8599218-8599284,8599571-8599636,859... 39 0.003
03_05_0155 - 21307001-21307239,21308217-21308320,21308564-213087... 39 0.003
12_01_0308 + 2318010-2318708,2318802-2318890,2319006-2319105,231... 38 0.006
02_01_0091 + 646299-649082 37 0.011
11_08_0102 - 28354880-28355056,28355159-28355376,28355634-283557... 33 0.17
08_01_0117 + 941334-941339,941720-941906,942444-942565,942648-94... 29 2.1
11_05_0063 - 18756289-18756390,18756769-18756954,18757053-187572... 29 2.8
05_05_0174 - 22960732-22960815,22960907-22961419,22961576-229620... 29 3.7
05_04_0355 - 20577189-20577275,20578001-20578129,20578252-205783... 29 3.7
06_01_0449 - 3176135-3176329,3176531-3177289,3177420-3177905,317... 28 6.5
06_02_0042 - 10901321-10901486,10903417-10903517,10903696-109038... 27 8.5
05_07_0003 + 26981956-26982190,26982258-26982318,26982739-269828... 27 8.5
04_04_0861 + 28836544-28836609,28838191-28838264,28838551-288386... 27 8.5
04_03_1025 + 21803807-21805249 27 8.5
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 243 bits (595), Expect = 7e-65
Identities = 113/175 (64%), Positives = 139/175 (79%), Gaps = 3/175 (1%)
Frame = +2
Query: 8 VQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 187
+Q+Q WP+A+ G++++G+AQTGSGKTL+Y+LP +VH+ QP + +GDGPI L+LAPTREL
Sbjct: 182 IQSQGWPMALKGRDMIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQGDGPIVLILAPTREL 241
Query: 188 AQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 367
A QIQQ + +FG+ S R+TC++GGAPK Q RDL RGVEIVIATPGRLID LE G TNL
Sbjct: 242 AVQIQQESGKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEGGHTNL 301
Query: 368 QRCTYLVLDEADRMLDMGFEPQIRKIIDQ---IRPDRQTLMWSGNMAKRSKETCR 523
+R TYLVLDEADRMLDMGFEPQIRKI+ Q IRPDRQTL WS + + R
Sbjct: 302 RRVTYLVLDEADRMLDMGFEPQIRKIVAQAWLIRPDRQTLYWSATWPREVESLAR 356
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 489 ATWPKEVRKLAEDYLGDYVQITIGSLQLSANHNI 590
ATWP+EV LA +L + ++ IGS L ANH+I
Sbjct: 345 ATWPREVESLARQFLQNPYKVIIGSPDLKANHSI 378
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 200 bits (487), Expect = 9e-52
Identities = 96/174 (55%), Positives = 124/174 (71%)
Frame = +2
Query: 8 VQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 187
+QAQ WPIA+ +++V VA+TGSGKTL Y++P + + R DGP LVL+PTREL
Sbjct: 206 IQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSR-DGPTVLVLSPTREL 264
Query: 188 AQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 367
A QIQ A +FG SS + + C++GGAPK Q RDLERG +IV+ATPGRL D LE +L
Sbjct: 265 ATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRVSL 324
Query: 368 QRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSGNMAKRSKETCRGL 529
+ +YLVLDEADRMLDMGFEPQIRKI+ Q++P RQTLM++ K ++ L
Sbjct: 325 HQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKEVRKIASDL 378
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/35 (60%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +3
Query: 489 ATWPKEVRKLAEDYLGDYVQITIGSL-QLSANHNI 590
ATWPKEVRK+A D L + VQ+ IG+ QL AN +I
Sbjct: 365 ATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSI 399
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 198 bits (484), Expect = 2e-51
Identities = 97/174 (55%), Positives = 125/174 (71%)
Frame = +2
Query: 8 VQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 187
+QAQ WPIA+ +++V +A+TGSGKTL Y+LP +HI R GP LVLAPTREL
Sbjct: 176 IQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGFMHIKRLQNNPRS-GPTVLVLAPTREL 234
Query: 188 AQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 367
A QI + A +FG SS + +TC++GGAPK Q RDL+RGV++V+ATPGRL D LE +L
Sbjct: 235 ATQILEEAVKFGRSSRISSTCLYGGAPKGPQLRDLDRGVDVVVATPGRLNDILEMRRISL 294
Query: 368 QRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSGNMAKRSKETCRGL 529
++ +YLVLDEADRMLDMGFEPQIRKI+ +I P RQTLM++ K + L
Sbjct: 295 KQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRRQTLMYTATWPKEVRRIAEDL 348
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/35 (62%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Frame = +3
Query: 489 ATWPKEVRKLAEDYLGDYVQITIGSL-QLSANHNI 590
ATWPKEVR++AED L VQ+TIGS+ +L AN I
Sbjct: 335 ATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAI 369
>01_01_0682 -
5244805-5244919,5246468-5246613,5246813-5246994,
5247069-5247295,5247382-5247467,5247564-5247656,
5247964-5248118,5248407-5248490,5248589-5248768,
5249587-5249828,5249927-5249982
Length = 521
Score = 195 bits (476), Expect = 2e-50
Identities = 102/172 (59%), Positives = 122/172 (70%)
Frame = +2
Query: 8 VQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 187
+Q+Q WP+A+ G++L+G+A+TGSGKTLAY+LPAIVH+N QP + GDGPI LVLAPTREL
Sbjct: 117 IQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTREL 176
Query: 188 AQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 367
A QIQQ A++FG VEIVIATPGRLID +E TNL
Sbjct: 177 AVQIQQEATKFG--------------------------VEIVIATPGRLIDMIESHHTNL 210
Query: 368 QRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSGNMAKRSKETCR 523
+R TYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQTL WS K ++ R
Sbjct: 211 RRVTYLVLDEADRMLDMGFEPQIKKIVSQIRPDRQTLYWSATWPKEVEQLAR 262
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +3
Query: 489 ATWPKEVRKLAEDYLGDYVQITIGSLQLSANHNI 590
ATWPKEV +LA ++L D ++ IGS +L ANH I
Sbjct: 251 ATWPKEVEQLARNFLFDPYKVIIGSEELKANHAI 284
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 194 bits (472), Expect = 6e-50
Identities = 92/172 (53%), Positives = 122/172 (70%)
Frame = +2
Query: 8 VQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 187
+Q Q PI +SG++++G+A+TGSGKT A++LP IVHI +QP + + +GPI +V APTREL
Sbjct: 245 IQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVVCAPTREL 304
Query: 188 AQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 367
A QI A +F +R V+GG K +Q ++L+ G EIVIATPGRLID L+ +
Sbjct: 305 AHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCEIVIATPGRLIDLLKMKALKM 364
Query: 368 QRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSGNMAKRSKETCR 523
R TYLVLDEADRM D+GFEPQIR I+ QIRPDRQTL++S M + + R
Sbjct: 365 FRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPYKVERLAR 416
>11_06_0767 + 27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 191 bits (466), Expect = 3e-49
Identities = 94/168 (55%), Positives = 122/168 (72%), Gaps = 3/168 (1%)
Frame = +2
Query: 8 VQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHIN---NQPPIRRGDGPIALVLAPT 178
+QAQ WP+A+ +++V +A+TGSGKTL Y++PA +H+ N P + GP LVLAPT
Sbjct: 630 IQAQTWPVALQNRDIVAIAKTGSGKTLGYLIPAFIHLRRYQNNPML----GPTVLVLAPT 685
Query: 179 RELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT 358
RELA QIQ A +FG SS V TC++GG K Q R+LERG +IV+ATPGRL D LE
Sbjct: 686 RELASQIQDEAVKFGRSSRVSCTCLYGGTSKGLQLRELERGADIVVATPGRLNDILEMRK 745
Query: 359 TNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSGNMAK 502
+L + ++LVLDEADRMLDMGFEPQIRKI+D+I +RQTLM++ K
Sbjct: 746 ISLHQVSFLVLDEADRMLDMGFEPQIRKIVDEIPRNRQTLMYTATWPK 793
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/35 (60%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +3
Query: 489 ATWPKEVRKLAEDYLGDYVQITIGSL-QLSANHNI 590
ATWPKEV K+A D L D VQ+ IGS+ +L AN +I
Sbjct: 789 ATWPKEVTKIAGDLLKDPVQVNIGSIDELVANKSI 823
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 184 bits (449), Expect = 4e-47
Identities = 86/163 (52%), Positives = 118/163 (72%), Gaps = 3/163 (1%)
Frame = +2
Query: 8 VQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 187
+QAQ PI MSG++ +G+A+TGSGKTLA++LP + H+ +QPP+ GDGPI L++APTREL
Sbjct: 311 IQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHVKDQPPVVPGDGPIGLIMAPTREL 370
Query: 188 AQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL--EKG-T 358
QI +F S + ++GG+ +Q +L+RG EIV+ TPGR+ID L G
Sbjct: 371 VVQIHSDIKKFAKSLGINCVAIYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSSGKI 430
Query: 359 TNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWS 487
TNL+R T+LV+DEADRM DMGFEPQI +I+ RPDRQT+++S
Sbjct: 431 TNLRRVTFLVMDEADRMFDMGFEPQITRIVQNTRPDRQTVLFS 473
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 181 bits (440), Expect = 4e-46
Identities = 84/169 (49%), Positives = 119/169 (70%), Gaps = 3/169 (1%)
Frame = +2
Query: 8 VQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 187
+QAQ PI MSG++ +G+A+TGSGKTLA++LP + H+ +QP + GDGPI L++APTREL
Sbjct: 450 IQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHVKDQPAVVPGDGPIGLIMAPTREL 509
Query: 188 AQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL--EKG-T 358
QI +F + + ++GG+ +Q +L+RG EIV+ TPGR+ID L G
Sbjct: 510 VVQIHSDIKKFSKALGINCVAIYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSSGKI 569
Query: 359 TNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSGNMAKR 505
TNL+R T+LV+DEADRM DMGFEPQI +I+ RPDRQT+++S ++
Sbjct: 570 TNLRRVTFLVMDEADRMFDMGFEPQITRIVQNTRPDRQTVLFSATFPRQ 618
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 165 bits (402), Expect = 2e-41
Identities = 86/168 (51%), Positives = 117/168 (69%), Gaps = 9/168 (5%)
Frame = +2
Query: 26 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHI--NNQPPIRRGDG---PIALVLAPTRELA 190
PI+++G++L+ AQTGSGKT A+ P I I + PP RG P+AL+L+PTREL+
Sbjct: 355 PISIAGRDLMACAQTGSGKTAAFCFPIISGIMRSRPPPRSRGSRTAYPLALILSPTRELS 414
Query: 191 QQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQ 370
QI + A +F + V+ +GGAP +Q R+LERGVEI++ATPGRL+D LE+ +LQ
Sbjct: 415 VQIHEEARKFAYQTGVKVVVAYGGAPITQQLRELERGVEILVATPGRLMDLLERARVSLQ 474
Query: 371 RCTYLVLDEADRMLDMGFEPQIRKIIDQI----RPDRQTLMWSGNMAK 502
YL LDEADRMLDMGFEPQIRKI++Q+ R +RQT+++S K
Sbjct: 475 MIKYLALDEADRMLDMGFEPQIRKIVEQMDMPPRGERQTMLFSATFPK 522
Score = 35.1 bits (77), Expect = 0.043
Identities = 12/31 (38%), Positives = 23/31 (74%)
Frame = +3
Query: 489 ATWPKEVRKLAEDYLGDYVQITIGSLQLSAN 581
AT+PKE++++A D+L DY+ + +G + S +
Sbjct: 518 ATFPKEIQRMASDFLADYIFLAVGRVGSSTD 548
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 165 bits (401), Expect = 2e-41
Identities = 88/168 (52%), Positives = 119/168 (70%), Gaps = 9/168 (5%)
Frame = +2
Query: 26 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHI-NNQPPIR-RGDG---PIALVLAPTRELA 190
PI+++G++L+ AQTGSGKT A+ P I I +++PP R RG P+AL+L+PTREL+
Sbjct: 269 PISIAGRDLMACAQTGSGKTAAFCFPIISGIMSSRPPQRPRGSRTAYPLALILSPTRELS 328
Query: 191 QQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQ 370
QI + A +F + VR +GGAP +Q R+LERGVEI++ATPGRL+D LE+ +LQ
Sbjct: 329 VQIHEEARKFAYQTGVRVVVAYGGAPIHQQLRELERGVEILVATPGRLMDLLERARVSLQ 388
Query: 371 RCTYLVLDEADRMLDMGFEPQIRKIIDQI----RPDRQTLMWSGNMAK 502
YL LDEADRMLDMGFEPQIRKI++Q+ R RQT+++S K
Sbjct: 389 MVKYLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPK 436
Score = 35.1 bits (77), Expect = 0.043
Identities = 12/31 (38%), Positives = 23/31 (74%)
Frame = +3
Query: 489 ATWPKEVRKLAEDYLGDYVQITIGSLQLSAN 581
AT+PKE++++A D+L DY+ + +G + S +
Sbjct: 432 ATFPKEIQRMASDFLADYIFLAVGRVGSSTD 462
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 163 bits (396), Expect = 9e-41
Identities = 84/170 (49%), Positives = 115/170 (67%), Gaps = 11/170 (6%)
Frame = +2
Query: 26 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG-------PIALVLAPTRE 184
PI+++G++L+ AQTGSGKT A+ P I I PP +R P+AL+L+PTRE
Sbjct: 187 PISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGPPAQRPQRGGMRTACPLALILSPTRE 246
Query: 185 LAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTN 364
L+ QI + A +F + VR +GGAP +Q RDLERGV+I++ATPGRL+D LE+ +
Sbjct: 247 LSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATPGRLVDLLERARVS 306
Query: 365 LQRCTYLVLDEADRMLDMGFEPQIRKIIDQI-RPD---RQTLMWSGNMAK 502
LQ YL LDEADRMLDMGFEPQ+R+I++Q+ P RQT+++S K
Sbjct: 307 LQSIRYLALDEADRMLDMGFEPQVRRIVEQMDMPPPGARQTMLFSATFPK 356
Score = 32.3 bits (70), Expect = 0.30
Identities = 11/31 (35%), Positives = 23/31 (74%)
Frame = +3
Query: 489 ATWPKEVRKLAEDYLGDYVQITIGSLQLSAN 581
AT+PKE++++A D+L +Y+ + +G + S +
Sbjct: 352 ATFPKEIQRMASDFLENYIFLAVGRVGSSTD 382
>07_02_0023 -
11918735-11918827,11919139-11919231,11919320-11919484,
11920234-11920327,11921012-11921136,11921228-11921313,
11921786-11921864,11923777-11923857,11924153-11924260,
11924870-11924994,11925110-11925530
Length = 489
Score = 155 bits (375), Expect = 3e-38
Identities = 76/163 (46%), Positives = 108/163 (66%), Gaps = 3/163 (1%)
Frame = +2
Query: 8 VQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINN---QPPIRRGDGPIALVLAPT 178
+QA WP + G++ +G+A TGSGKT+A+ +PA++H+ + ++G P LVL+PT
Sbjct: 118 IQAYAWPYLLDGRDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKGV-PRVLVLSPT 176
Query: 179 RELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT 358
RELAQQI V E G + + C++GG K Q L+ GV+IVI TPGR+ D +E G
Sbjct: 177 RELAQQIADVLCEAGAPCGISSVCLYGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGI 236
Query: 359 TNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWS 487
L +++VLDEADRMLDMGFEP++R I+ Q RQT+M+S
Sbjct: 237 CRLNDVSFVVLDEADRMLDMGFEPEVRAILSQTASVRQTVMFS 279
Score = 36.3 bits (80), Expect = 0.018
Identities = 14/36 (38%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +3
Query: 489 ATWPKEVRKLAEDYLG-DYVQITIGSLQLSANHNIL 593
ATWP V +LA++++ + +++ IGS L+ANH+++
Sbjct: 280 ATWPPAVHQLAQEFMDPNPIKVVIGSEDLAANHDVM 315
>12_02_1076 -
25862671-25863159,25863290-25863451,25863614-25863838,
25863939-25864037,25864584-25864992,25865094-25865221,
25865955-25866329
Length = 628
Score = 154 bits (374), Expect = 4e-38
Identities = 76/156 (48%), Positives = 108/156 (69%), Gaps = 1/156 (0%)
Frame = +2
Query: 32 AMSGKNLVGVAQTGSGKTLAYILPAI-VHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 208
AM GK++VG A+TG+GKTLA+ +P + I + G P+A+VLAPTRELA+Q+++
Sbjct: 132 AMQGKDMVGRAKTGTGKTLAFGIPILDAIIRHNEKNSPGKFPLAIVLAPTRELAKQVER- 190
Query: 209 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 388
EF +SS V CV+GG P +Q R L GV++VI TPGR+ID L++G NL ++V
Sbjct: 191 --EFSDSSNVETICVYGGTPISQQIRQLNYGVDVVIGTPGRVIDLLKRGALNLSEVRFVV 248
Query: 389 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSGNM 496
LDEAD+ML +GF+ + I+D++ P RQTLM+S M
Sbjct: 249 LDEADQMLSVGFDEDVETILDRVPPKRQTLMFSATM 284
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 148 bits (358), Expect = 4e-36
Identities = 75/175 (42%), Positives = 109/175 (62%), Gaps = 9/175 (5%)
Frame = +2
Query: 8 VQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPT 178
+Q Q P+A+SG++++G+A TGSGKTL ++LP I+ + PI G+GP L++ P+
Sbjct: 199 IQVQGLPVALSGRDMIGIAFTGSGKTLVFVLPLIMAALQEEILMPIVPGEGPFGLIVCPS 258
Query: 179 RELAQQIQQVASEF----GNSSY--VRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 340
RELA+Q +V F + Y +R GG R Q +++GV IV+ATPGRL D
Sbjct: 259 RELARQTHEVIEMFLAPLMEAGYPEIRPLLCIGGVDMRTQMEVVKKGVHIVVATPGRLKD 318
Query: 341 FLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSGNMAKR 505
L K NL C YL LDEADR++D+GFE IR++ D + RQTL++S M ++
Sbjct: 319 LLSKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEK 373
>03_05_0865 - 28365430-28367640
Length = 736
Score = 146 bits (354), Expect = 1e-35
Identities = 67/145 (46%), Positives = 99/145 (68%), Gaps = 3/145 (2%)
Frame = +2
Query: 26 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQ 196
P+ + ++++G+A+TGSGKT A++LP + +I PPI +GP A+V+APTRELAQQ
Sbjct: 347 PLGLQQRDVIGIAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPYAVVMAPTRELAQQ 406
Query: 197 IQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRC 376
I++ +F ++ + GG EQ + +G E+VIATPGRL+D LE+ L +C
Sbjct: 407 IEEETVKFATYLGIKVVSIVGGQSIEEQGFKIRQGCEVVIATPGRLLDCLERRYAVLNQC 466
Query: 377 TYLVLDEADRMLDMGFEPQIRKIID 451
Y+VLDEADRM+DMGFEPQ+ ++D
Sbjct: 467 NYVVLDEADRMIDMGFEPQVVGVLD 491
>07_01_0322 -
2258067-2258519,2258620-2258781,2258896-2259159,
2259196-2259294,2259723-2260131,2260223-2260350,
2261115-2261181,2262766-2262838,2262911-2263130
Length = 624
Score = 137 bits (332), Expect = 5e-33
Identities = 66/156 (42%), Positives = 105/156 (67%), Gaps = 1/156 (0%)
Frame = +2
Query: 32 AMSGKNLVGVAQTGSGKTLAYILPAIVHI-NNQPPIRRGDGPIALVLAPTRELAQQIQQV 208
AM GK+++G A+TG+GKTLA+ +P + I + G P+A++LAPTRELA+Q+++
Sbjct: 127 AMQGKDMIGRARTGTGKTLAFGIPIMDRILRHNEKNGSGRNPLAIILAPTRELARQVEK- 185
Query: 209 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 388
EF S+ + + CV+GG P Q R L GV++V+ TPGR+ID L +G NL ++V
Sbjct: 186 --EFKESAPLDSLCVYGGVPISHQMRALNYGVDVVVGTPGRIIDLLRRGVLNLSEIQFVV 243
Query: 389 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSGNM 496
LDEAD+ML +GF+ + I++ + +RQ++++S M
Sbjct: 244 LDEADQMLAVGFDEDVEVIMENLPQNRQSMLFSATM 279
>03_06_0531 +
34552206-34552598,34552665-34552735,34553363-34553369,
34553603-34553736,34553834-34554245,34554655-34554753,
34555059-34555283,34555652-34556029,34556412-34556555,
34556832-34556927,34557228-34557547,34557965-34558040
Length = 784
Score = 132 bits (319), Expect = 2e-31
Identities = 68/167 (40%), Positives = 104/167 (62%), Gaps = 3/167 (1%)
Frame = +2
Query: 32 AMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPP---IRRGDGPIALVLAPTRELAQQIQ 202
A+ G++L+ A+TG+GKTLA+ +P I + + +RRG P LVLAPTRELA+Q++
Sbjct: 164 ALDGRDLIARAKTGTGKTLAFGIPMIKQLMEEDDGRSVRRGRIPRVLVLAPTRELAKQVE 223
Query: 203 QVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 382
+ E ++ + CV+GG Q L RGV++V+ TPGR+ID + G+ L Y
Sbjct: 224 KEIKE--SAPKLSTVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVKY 281
Query: 383 LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSGNMAKRSKETCR 523
LVLDEAD+ML +GFE + I+ Q+ +RQ++++S M K+ R
Sbjct: 282 LVLDEADQMLAVGFEEDVETILQQLPAERQSMLFSATMPGWVKKLSR 328
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 127 bits (307), Expect = 6e-30
Identities = 84/222 (37%), Positives = 116/222 (52%), Gaps = 36/222 (16%)
Frame = +2
Query: 8 VQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIV-----------HINNQPPIRRGDGP 154
VQ PIA++G++L+ AQTGSGKT A+ LP + H R P
Sbjct: 110 VQRYSMPIALAGRDLMACAQTGSGKTAAFCLPVVSGLVAAGGSGIGHRERSSFNRAAAKP 169
Query: 155 IALVLAPTRELAQQ-------------------------IQQVASEFGNSSYVRNTCVFG 259
ALVLAPTRELA Q I + A +F + +R +G
Sbjct: 170 RALVLAPTRELAAQSFDNVIFIDTVNQNFSLFCYEELDNINEEAKKFSFQTGLRVVVAYG 229
Query: 260 GAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 439
G P Q RDLERG +I++ATPGRL+D +E+ +L+ YLV+DEADRMLDMGFEPQIR
Sbjct: 230 GTPMYNQLRDLERGADILVATPGRLVDMVERSKVSLEAIKYLVMDEADRMLDMGFEPQIR 289
Query: 440 KIIDQIRPDRQTLMWSGNMAKRSKETCRGLFRRLCPNYYWIT 565
KI++++ R+++ + + + L NY +IT
Sbjct: 290 KIVERMNMPRKSVRQTMLFSATFPPEIQRLASDFLSNYIFIT 331
Score = 34.3 bits (75), Expect = 0.074
Identities = 13/31 (41%), Positives = 23/31 (74%)
Frame = +3
Query: 489 ATWPKEVRKLAEDYLGDYVQITIGSLQLSAN 581
AT+P E+++LA D+L +Y+ IT+G + S +
Sbjct: 310 ATFPPEIQRLASDFLSNYIFITVGRVGSSTD 340
>09_05_0008 +
20042390-20042845,20043323-20043457,20043539-20043679,
20043771-20043882,20044084-20044154,20044251-20044405,
20044484-20044595,20044932-20045033,20045116-20045176,
20045251-20045422,20045512-20045608,20045692-20045786,
20045881-20046014,20046208-20046422
Length = 685
Score = 125 bits (302), Expect = 2e-29
Identities = 70/176 (39%), Positives = 106/176 (60%), Gaps = 7/176 (3%)
Frame = +2
Query: 8 VQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINN--QPPIRRGD---GPIALVLA 172
+QA + + + G +LVG A+TG GKTLA++LP + + N RR D P LVL
Sbjct: 130 IQATTFDLVLDGHDLVGRARTGQGKTLAFVLPILESLVNGTHKASRRTDYGRPPTVLVLL 189
Query: 173 PTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEK 352
PTRELA+Q+ + +G + + CV+GG+ R Q + +GV+IV+ TPGR+ DF+EK
Sbjct: 190 PTRELAKQVHTDFAFYGATFGLSACCVYGGSDYRSQEMAIRKGVDIVVGTPGRVKDFVEK 249
Query: 353 GTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIR--PDRQTLMWSGNMAKRSKE 514
GT N + + VLDEAD ML+MGF + I+ ++ QTL++S + + K+
Sbjct: 250 GTLNFRSLKFRVLDEADEMLNMGFVDDVELILGKVEDVTKVQTLLFSATIPEWVKK 305
>03_06_0344 -
33276366-33276548,33277044-33277169,33277254-33277322,
33277401-33277505,33277595-33277633,33277717-33278016,
33278093-33278182,33278271-33278312,33278433-33278516,
33278762-33278947,33279218-33279403,33279663-33280025
Length = 590
Score = 118 bits (284), Expect = 4e-27
Identities = 66/180 (36%), Positives = 112/180 (62%), Gaps = 2/180 (1%)
Frame = +2
Query: 5 EVQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRE 184
++QA+ P ++GK+++G A+TGSGKTLA+++PAI +++ + R +G +V+ PTRE
Sbjct: 121 QIQARSIPHLLNGKDVMGAAKTGSGKTLAFLIPAIEMLHHAHFMPR-NGTGVVVVCPTRE 179
Query: 185 LAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLE--KGT 358
LA Q VA E + GG +R +A L +GV +++ATPGRL+D L+ KG
Sbjct: 180 LAIQTHNVAKELMKYHSQTLGYIIGGNGRRGEADQLAKGVNLLVATPGRLLDHLQNTKGF 239
Query: 359 TNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSGNMAKRSKETCRGLFRR 538
+R L++DEADR+L+ FE +++I ++ +RQT+++S ++ KE + F +
Sbjct: 240 I-YRRLKCLIIDEADRLLEQNFEEDMKQIFKRLPLNRQTVLFSATQTEQVKEFAKLSFEK 298
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 117 bits (281), Expect = 8e-27
Identities = 63/165 (38%), Positives = 95/165 (57%), Gaps = 2/165 (1%)
Frame = +2
Query: 8 VQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD--GPIALVLAPTR 181
VQ Q P ++ ++L+ A TGSGKT ++++P I H ++ R D GP+A+VLAPTR
Sbjct: 208 VQMQVIPSSICNRSLLVSADTGSGKTASFLVPIIAHCSHVRSERCTDKQGPLAIVLAPTR 267
Query: 182 ELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTT 361
EL Q+++ A G + V GG P +Q +E G+E+++ TPGRLID L K
Sbjct: 268 ELCLQVEEQAKVLGKGLPFKTALVVGGDPLAQQIYRIENGIELIVGTPGRLIDLLMKHNV 327
Query: 362 NLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSGNM 496
+L + VLDE D +L+ GF Q+ +I Q Q +M+S +
Sbjct: 328 DLNKVDVFVLDEVDCLLERGFRDQVMQIF-QALSHPQVMMFSATV 371
>03_05_0619 -
26180980-26181105,26181329-26181417,26181518-26181629,
26181711-26181848,26182004-26182150,26182458-26182532,
26182627-26182668,26183033-26183152,26183806-26183880,
26184051-26184113,26184690-26184759,26184877-26185006,
26185097-26185328
Length = 472
Score = 112 bits (270), Expect = 2e-25
Identities = 66/177 (37%), Positives = 103/177 (58%), Gaps = 1/177 (0%)
Frame = +2
Query: 8 VQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 187
+QA+ P A+ G++L+G+ QTGSGKT A+ LP I + Q + A VL+PTREL
Sbjct: 67 IQAEAIPHALEGRDLIGLGQTGSGKTGAFALPIIQALLKQD---KPQALFACVLSPTREL 123
Query: 188 AQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL-EKGTTN 364
A QI Q G++ + T + GG + +QA L + IV+ TPGRL+D L + +
Sbjct: 124 AFQIGQQFEALGSAIGLSCTVLVGGVDRVQQAVSLAKRPHIVVGTPGRLLDHLTDTKGFS 183
Query: 365 LQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSGNMAKRSKETCRGLFR 535
L + YLVLDEAD++L++ F+ + I++ I +R+T ++S M + + R R
Sbjct: 184 LNKLKYLVLDEADKLLNVEFQKALDDILNVIPKERRTFLFSATMTNKVSKLQRACLR 240
>01_01_0447 -
3327727-3328144,3328438-3328688,3328820-3328909,
3329061-3329159,3329240-3329353,3329450-3329555,
3329661-3329740,3329913-3330173,3330271-3330507,
3330635-3330922
Length = 647
Score = 112 bits (269), Expect = 2e-25
Identities = 63/179 (35%), Positives = 102/179 (56%), Gaps = 3/179 (1%)
Frame = +2
Query: 8 VQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 187
VQA P+ +S K++ A TGSGKTLA+++P + + +P + + ++++PTREL
Sbjct: 49 VQAAAIPLLLSHKDVAVDAATGSGKTLAFVVPVVEILRRRPSPPKPHEVLGIIISPTREL 108
Query: 188 AQQIQQVASE-FGNSSYVRNTCVFGGAPKREQARDL-ERGVEIVIATPGRLIDFLEK-GT 358
+ QI VA F V + + GG + + + L E G I++ TPG+L D +E+ T
Sbjct: 109 SSQIYNVAQPFFATLKGVSSMLLVGGFDIKAELKKLEEEGANILVGTPGKLFDVMERLDT 168
Query: 359 TNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSGNMAKRSKETCRGLFR 535
N + L+LDEADR+LD+GF+ QI II ++ R+T ++S + KE + R
Sbjct: 169 LNYKNLEILILDEADRLLDLGFQKQITSIISKLPKLRRTGLFSATQTEAVKELAKAGLR 227
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 111 bits (268), Expect = 3e-25
Identities = 61/170 (35%), Positives = 98/170 (57%), Gaps = 1/170 (0%)
Frame = +2
Query: 8 VQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 187
+QA P+A++G+++ G A TGSGKT A+ LP + + +P +R L+L PTREL
Sbjct: 220 IQAACIPLALTGRDICGSAITGSGKTAAFSLPVLERLLFRP--KRVPAIRVLILTPTREL 277
Query: 188 AQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG-TTN 364
A Q+ + + + +R + GG + Q L +IV+ATPGR+ID L +
Sbjct: 278 AAQVHSMIEKLAQFTDIRCCLIVGGLSTKVQEVALRSMPDIVVATPGRIIDHLRNSLSVG 337
Query: 365 LQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSGNMAKRSKE 514
L+ L+LDEADR+L++GF +I+++I RQT+++S M + E
Sbjct: 338 LEDLAILILDEADRLLELGFSAEIQELIRMCPRRRQTMLFSATMTEEINE 387
>06_03_0337 +
19678152-19678484,19678616-19678801,19679232-19679417,
19680840-19680926,19681045-19681086,19681164-19681253,
19681399-19681503,19681797-19681835,19681914-19682018,
19682463-19682531,19682587-19682736,19683156-19683335
Length = 523
Score = 111 bits (266), Expect = 5e-25
Identities = 67/181 (37%), Positives = 104/181 (57%), Gaps = 5/181 (2%)
Frame = +2
Query: 5 EVQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAI---VHINNQPPIRRGDGPIALVLAP 175
E+QA+ P M G +++ A+TGSGKTLA+++PAI + P R G G +VL P
Sbjct: 111 EIQARSIPPLMLGSDVMASAKTGSGKTLAFLIPAIELLCRLRFSP--RNGTG--VIVLCP 166
Query: 176 TRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG 355
TRELA Q VA E V GG R +A L +G+ +++ATPGRL+D ++K
Sbjct: 167 TRELAIQTHNVAKELMRYHSQTLGYVIGGIDLRGEAEQLAKGINVLVATPGRLLDHMQKT 226
Query: 356 TTNLQRC-TYLVLDEADRMLDMGFEPQIRKIIDQI-RPDRQTLMWSGNMAKRSKETCRGL 529
+ C L++DEADR+L+ FE Q+++I + R RQT+++S ++ ++ +
Sbjct: 227 KSFKYECLKCLIIDEADRILEQNFEEQMKQIFKLLPRQGRQTVLFSATQTEKVEDFAKLT 286
Query: 530 F 532
F
Sbjct: 287 F 287
>07_03_1566 +
27766336-27766393,27766480-27766609,27766728-27766797,
27767134-27767196,27767741-27767815,27768035-27768154,
27768508-27768549,27768651-27768725,27768909-27769055,
27769165-27769302,27769448-27769562,27769658-27769746,
27770062-27770184
Length = 414
Score = 110 bits (265), Expect = 7e-25
Identities = 66/180 (36%), Positives = 103/180 (57%), Gaps = 4/180 (2%)
Frame = +2
Query: 8 VQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP--IALVLAPTR 181
+QA+ P A+ G++++GV QTGSGKT A+ LP I Q + P A VLAPTR
Sbjct: 9 IQAEVIPFALQGRDVIGVGQTGSGKTAAFALPII-----QALLEHEHRPCFFACVLAPTR 63
Query: 182 ELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL--EKG 355
ELA QI + G++ ++ + + GG P+ Q L + +V+ TPGRL+D L KG
Sbjct: 64 ELAIQIAKQFEALGSAISLQCSVLIGGIPRTSQTISLAKRPHVVVGTPGRLLDHLTNTKG 123
Query: 356 TTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSGNMAKRSKETCRGLFR 535
+ + YLVLDEAD +L + F+ + I++ I +R+T ++S M ++ K+ R +
Sbjct: 124 -FSFNKLKYLVLDEADDLLKVDFQKAVDDILNVIPKERRTFLFSATMTEKVKKLRRACLK 182
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 109 bits (262), Expect = 2e-24
Identities = 57/169 (33%), Positives = 96/169 (56%)
Frame = +2
Query: 8 VQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 187
+Q + PIA++G +++ A+ G+GKT A+ +PA+ I+ + ++L PTREL
Sbjct: 150 IQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDKNAIQ-----VVILVPTREL 204
Query: 188 AQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 367
A Q QV E G ++ GG ++ L + V +++ TPGR++D +KG L
Sbjct: 205 ALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIVRLYQPVHLLVGTPGRILDLTKKGVCVL 264
Query: 368 QRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSGNMAKRSKE 514
+ C+ LV+DEAD++L F+P I+++I + +RQ LM+S KE
Sbjct: 265 KNCSMLVMDEADKLLSPEFQPSIQELIRYLPSNRQILMFSATFPVTVKE 313
>05_01_0079 +
531617-531734,531987-532059,532152-532261,532400-532543,
532628-532736,532836-533182,533260-533333,533478-533782,
534168-534294,534385-534414,534589-534837
Length = 561
Score = 109 bits (261), Expect = 2e-24
Identities = 59/154 (38%), Positives = 97/154 (62%), Gaps = 4/154 (2%)
Frame = +2
Query: 8 VQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI--NNQPPIRRGDGPIALVLAPTR 181
+QAQ P+AMSG++++ A TG+GKTLAY+ P IVH+ +P + R DG ALVL PTR
Sbjct: 50 IQAQAIPVAMSGQHMLVKAATGTGKTLAYLAP-IVHLLQMREPRVERTDGTFALVLVPTR 108
Query: 182 ELAQQIQQVASEFGNS-SYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT 358
EL Q+ +A + + ++ + GG + ++ L +G+ I+IATPGRL+D L+ +
Sbjct: 109 ELCLQVYGIAQQLVHRFHWLVPGYIMGGENRAKEKARLRKGISILIATPGRLLDHLQHTS 168
Query: 359 TNL-QRCTYLVLDEADRMLDMGFEPQIRKIIDQI 457
+ + ++V DEAD +L++GF + I++ +
Sbjct: 169 SFVYPNMRWIVFDEADSILELGFGKALEDILEHL 202
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 107 bits (257), Expect = 7e-24
Identities = 55/169 (32%), Positives = 95/169 (56%)
Frame = +2
Query: 8 VQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 187
+Q + PIA++G +++ A+ G+GKT A+ +PA+ I+ + + ++L PTREL
Sbjct: 160 IQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQEKNAIQ-----VVILVPTREL 214
Query: 188 AQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 367
A Q QV E G ++ GG ++ L + V +++ TPGR++D +KG L
Sbjct: 215 ALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIIRLYQPVHLLVGTPGRILDLTKKGICIL 274
Query: 368 QRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSGNMAKRSKE 514
+ C+ L++DEAD++L F+P + ++I + RQ LM+S KE
Sbjct: 275 KDCSMLIMDEADKLLSPEFQPSVEQLIRYLPASRQILMFSATFPVTVKE 323
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 106 bits (255), Expect = 1e-23
Identities = 56/164 (34%), Positives = 94/164 (57%), Gaps = 1/164 (0%)
Frame = +2
Query: 8 VQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 187
+Q + P+ ++G ++ +A+TGSGKT A+++P I + G G AL+L+PTR+L
Sbjct: 52 IQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQRLRRHDA---GAGIRALILSPTRDL 108
Query: 188 AQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL-EKGTTN 364
A Q + A + G + ++ + + GG Q +L +I+IATPGRL+ L E N
Sbjct: 109 ATQTLKFAQQLGKFTDLKISLIVGGDSMESQFEELAENPDIIIATPGRLVHHLAEVEDLN 168
Query: 365 LQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSGNM 496
L+ Y+V DEAD + +G Q+ I+ ++ RQTL++S +
Sbjct: 169 LRTVEYVVFDEADSLFSLGLIQQLHDILHKLSDTRQTLLFSATL 212
>07_03_1392 -
26238885-26239007,26239137-26239235,26239636-26239720,
26239825-26240028,26240360-26240682,26241904-26242575
Length = 501
Score = 105 bits (253), Expect = 2e-23
Identities = 64/167 (38%), Positives = 92/167 (55%), Gaps = 3/167 (1%)
Frame = +2
Query: 8 VQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 187
VQ + P A+ G++++G+A+TGSGKT A+ LP I+H + P G AL LAPTREL
Sbjct: 103 VQRRCIPRALEGRDVLGIAETGSGKTAAFALP-ILHRLGEDPY----GVAALALAPTREL 157
Query: 188 AQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG---T 358
A Q+ + G +R GG QA+ L R +V+ATPGR+ +
Sbjct: 158 AAQLAEQFRALGAPLGLRCLAAIGGFDSLGQAKGLARRPHVVVATPGRIATLINDDPDLA 217
Query: 359 TNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSGNMA 499
R +LVLDEADR+LD+ FE +R I + RQT ++S ++
Sbjct: 218 KVFARTKFLVLDEADRVLDINFEEDLRVIFGSLPKKRQTFLFSATIS 264
>01_05_0722 +
24598426-24598649,24599113-24599219,24599319-24599374,
24599469-24599675,24599757-24599963,24600037-24600123,
24600167-24600208,24600209-24600304,24600406-24600621,
24600693-24600875,24601014-24601241
Length = 550
Score = 105 bits (252), Expect = 3e-23
Identities = 69/177 (38%), Positives = 104/177 (58%), Gaps = 7/177 (3%)
Frame = +2
Query: 5 EVQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRE 184
+VQ PI + G++++ A+TG+GKT+A++LPAI ++ P R LV+ PTRE
Sbjct: 99 QVQEATLPIILQGEDVLAKAKTGTGKTVAFLLPAIELLSTLP---RSPSINLLVICPTRE 155
Query: 185 LAQQIQQVASEFGNSSYVRNT---CVFGGAPKREQARDLERG-VEIVIATPGRLIDFLEK 352
LA Q+ A + Y R+ V GG ++ R ++ +I++ATPGRL D LE
Sbjct: 156 LANQVAAEARKL--LKYHRSLGVQVVIGGTKLPQEQRSMQSNPCQILVATPGRLKDHLEN 213
Query: 353 --GTTN-LQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSGNMAKRSKE 514
G +N ++ LVLDEADR+LDMGF I KII I +RQTL++S + + ++
Sbjct: 214 TPGFSNRIKGVKVLVLDEADRLLDMGFRRDIEKIIAFIPKERQTLLFSATVPEEVRQ 270
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 104 bits (250), Expect = 5e-23
Identities = 56/169 (33%), Positives = 95/169 (56%)
Frame = +2
Query: 8 VQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 187
+Q + PIA++G +++ A+ G+GKT A+ +PA+ I+ + + ++L PTREL
Sbjct: 173 IQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDPEKNAIQ-----VVILVPTREL 227
Query: 188 AQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 367
A Q QV E G ++ GG ++ L + V +++ TPGR++D KG L
Sbjct: 228 ALQTSQVCKELGKYLNIQVMVSTGGTSLKDDIMRLYQPVHLLVGTPGRILDLTRKGICVL 287
Query: 368 QRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSGNMAKRSKE 514
+ C+ LV+DEAD++L F+P I ++I + +RQ LM+S K+
Sbjct: 288 KDCSMLVMDEADKLLAPEFQPSIEQLIHFLPANRQLLMFSATFPVTVKD 336
>06_03_0287 - 19168685-19168735,19168847-19168884,19169517-19169727,
19171461-19171643,19171879-19172028,19172161-19172256,
19172378-19172464,19172535-19172741,19172823-19173047,
19173150-19173261,19173397-19173453,19175522-19176882
Length = 925
Score = 102 bits (244), Expect = 2e-22
Identities = 65/174 (37%), Positives = 97/174 (55%), Gaps = 8/174 (4%)
Frame = +2
Query: 41 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIR--RGDGPIALVLA-PTRELAQQIQQVA 211
GK+++ A+TG+GKT+A++LPAI ++ PPI + PI++V+ PTRELA Q A
Sbjct: 492 GKDVLAKAKTGTGKTVAFLLPAIEVVSKLPPIDCDKKRPPISVVVVCPTRELADQAAAEA 551
Query: 212 SEFGN-SSYVRNTCVFGGAPKR-EQARDLERGVEIVIATPGRLIDFLEKG---TTNLQRC 376
++ + V GG EQ R +I++ATPGRL D +E T L
Sbjct: 552 NKLLKFHPSIGVQLVIGGTRMALEQKRMHTNPCQILVATPGRLKDHMENTPGFATRLMGV 611
Query: 377 TYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSGNMAKRSKETCRGLFRR 538
L+LDEADR+LDMGF I +I+ + RQTL++S + ++ C +R
Sbjct: 612 KVLILDEADRLLDMGFRTDIERIVAALPKQRQTLLFSATVPDEVRQVCHIAMKR 665
>01_01_0602 -
4484972-4485450,4485949-4485997,4486108-4486237,
4486636-4486778,4486819-4486877,4487167-4487200,
4487489-4487629,4487719-4487907,4488027-4488122,
4488163-4488225,4488588-4489097
Length = 630
Score = 102 bits (244), Expect = 2e-22
Identities = 66/177 (37%), Positives = 95/177 (53%), Gaps = 25/177 (14%)
Frame = +2
Query: 5 EVQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAI----------VHINNQPP-----IR 139
E+Q P ++G ++V + TGSGKTLAY+LP + + INN P +R
Sbjct: 135 EIQCVGVPAVLAGTSVVLGSHTGSGKTLAYLLPLVQIEIENTYRLLPINNGVPANQKLLR 194
Query: 140 RGDG----------PIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARD 289
R + P A+VL PTREL +Q+ +VA + + R+T V GG+ R Q
Sbjct: 195 RDEAMLGMSMKPRRPRAVVLCPTRELTEQVFRVAKSISHHARFRSTMVSGGSRIRPQEDS 254
Query: 290 LERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIR 460
L V++V+ TPGR++D ++ G YLVLDEAD M D GF P IRK + ++
Sbjct: 255 LNMPVDMVVGTPGRILDHIKDGNMVYGDIKYLVLDEADTMFDQGFGPDIRKFLAPLK 311
>02_05_1293 -
35520733-35520963,35521696-35521878,35522040-35522255,
35522936-35523022,35523125-35523331,35523426-35523650,
35523743-35523798,35524009-35524115,35524443-35525470
Length = 779
Score = 99.1 bits (236), Expect = 2e-21
Identities = 65/185 (35%), Positives = 101/185 (54%), Gaps = 8/185 (4%)
Frame = +2
Query: 8 VQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD--GPI-ALVLAPT 178
VQ P+ + GK+++ A+TG+GK+ A++LPAI + N PI +L+L PT
Sbjct: 368 VQETALPMCLEGKDVLVKAKTGTGKSAAFLLPAIESVLNAMKSHTNHRVSPIFSLILCPT 427
Query: 179 RELAQQIQQVASEFGNSSY-VRNTCVFGGAPKREQARDLERG-VEIVIATPGRLIDFLEK 352
RELA Q+ A+ + + GG + R LE +I++ATPGRL+D +E
Sbjct: 428 RELAIQLTAEANVLLKYHQGIGVQSLIGGTRFKLDQRRLESDPCQILVATPGRLLDHIEN 487
Query: 353 GTT---NLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSGNMAKRSKETCR 523
++ L LVLDEAD +LD+GF I KI+D + RQTL++S + K + +
Sbjct: 488 KSSFSVRLMGLKLLVLDEADHLLDLGFRTDIEKIVDSLPRQRQTLLFSATIPKEVRRVSQ 547
Query: 524 GLFRR 538
+ +R
Sbjct: 548 LVLKR 552
>01_05_0721 +
24594815-24594834,24595207-24595313,24595417-24595472,
24595562-24595810,24595871-24596077,24596157-24596243,
24596331-24596426,24596500-24596715,24596908-24597090,
24597222-24597449
Length = 482
Score = 98.3 bits (234), Expect = 4e-21
Identities = 67/188 (35%), Positives = 104/188 (55%), Gaps = 18/188 (9%)
Frame = +2
Query: 5 EVQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD---GPIALVLAP 175
+VQ P+ + GK+++ A+TG+GKT+A++LPAI ++ P RR LV+ P
Sbjct: 31 QVQEATLPVILQGKDVLAKAKTGTGKTVAFLLPAIEVLSALPNSRRDQLRPSINLLVMCP 90
Query: 176 TRELAQQIQQVASEFGNSSYVRNT---CVFGGAPKREQARDLERGV---------EIVIA 319
TRELA Q+ A + Y R+ V GG ++ R ++ +I++A
Sbjct: 91 TRELAIQVAVEAKKL--LKYHRSLGVQVVIGGTRLTQEQRSMQANPCQVVPMNYRQILVA 148
Query: 320 TPGRLIDFLEKG---TTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSG 490
TPGRL D +E +T L+ LVLDEADR+LDMGF I +II + +RQTL++S
Sbjct: 149 TPGRLKDHVENTPGFSTRLKGVKVLVLDEADRLLDMGFRRDIERIIASVPKERQTLLFSA 208
Query: 491 NMAKRSKE 514
+ + ++
Sbjct: 209 TVPEEVRQ 216
>02_01_0355 +
2558792-2558862,2558993-2559099,2559185-2559615,
2560100-2560735
Length = 414
Score = 90.6 bits (215), Expect = 8e-19
Identities = 57/161 (35%), Positives = 82/161 (50%)
Frame = +2
Query: 41 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 220
G +++ AQ+G+GKT + + ++ + +LVLAPTRELAQQI++V
Sbjct: 78 GLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQ-----SLVLAPTRELAQQIEKVMRAL 132
Query: 221 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 400
G+ V+ GG RE R L GV +V+ TPGR+ D L + + VLDEA
Sbjct: 133 GDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEA 192
Query: 401 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSGNMAKRSKETCR 523
D ML GF+ QI I + P Q ++S M + E R
Sbjct: 193 DEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITR 233
>03_05_0052 -
20293197-20293310,20293938-20294024,20294133-20294270,
20295009-20295128,20295236-20295343,20296053-20296133,
20296216-20296456,20297010-20297305
Length = 394
Score = 89.4 bits (212), Expect = 2e-18
Identities = 52/154 (33%), Positives = 82/154 (53%)
Frame = +2
Query: 35 MSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAS 214
+SG++++ AQ+G+GKT L ++ +R AL+L+PTRELA Q ++V
Sbjct: 66 ISGRDVIAQAQSGTGKTSMISLSVCQIVDTA--VREVQ---ALILSPTRELAAQTERVML 120
Query: 215 EFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 394
G+ ++ GG E R LE GV +V TPGR+ D +++ T + L+LD
Sbjct: 121 AIGDYINIQVHACIGGKSIGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLILD 180
Query: 395 EADRMLDMGFEPQIRKIIDQIRPDRQTLMWSGNM 496
EAD ML GF+ QI + + P+ Q + S +
Sbjct: 181 EADEMLGRGFKDQIYDVYRYLPPELQVCLISATL 214
>01_06_0020 +
25630728-25631023,25631308-25631548,25631629-25631709,
25632109-25632216,25632329-25632448,25632806-25632943,
25633064-25633150,25633802-25633915
Length = 394
Score = 89.4 bits (212), Expect = 2e-18
Identities = 52/154 (33%), Positives = 82/154 (53%)
Frame = +2
Query: 35 MSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAS 214
+SG++++ AQ+G+GKT L ++ +R AL+L+PTRELA Q ++V
Sbjct: 66 ISGRDVIAQAQSGTGKTSMISLSVCQIVDTA--VREVQ---ALILSPTRELAAQTERVML 120
Query: 215 EFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 394
G+ ++ GG E R LE GV +V TPGR+ D +++ T + L+LD
Sbjct: 121 AIGDFINIQVHACIGGKSIGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLILD 180
Query: 395 EADRMLDMGFEPQIRKIIDQIRPDRQTLMWSGNM 496
EAD ML GF+ QI + + P+ Q + S +
Sbjct: 181 EADEMLGRGFKDQIYDVYRYLPPELQVCLISATL 214
>06_03_1284 -
28988287-28988922,28989335-28989765,28989850-28989956,
28990066-28990136
Length = 414
Score = 88.6 bits (210), Expect = 3e-18
Identities = 57/161 (35%), Positives = 81/161 (50%)
Frame = +2
Query: 41 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 220
G +++ AQ+G+GKT + + ++ + ALVLAPTRELAQQI++V
Sbjct: 78 GLDVIQQAQSGTGKTATFCSGILQQLDYAVVECQ-----ALVLAPTRELAQQIEKVMRAL 132
Query: 221 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 400
G+ V+ GG RE R L GV +V+ TPGR+ D L + + VLDEA
Sbjct: 133 GDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEA 192
Query: 401 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSGNMAKRSKETCR 523
D ML GF+ QI I + Q ++S M + E R
Sbjct: 193 DEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITR 233
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 85.8 bits (203), Expect = 2e-17
Identities = 56/160 (35%), Positives = 87/160 (54%), Gaps = 18/160 (11%)
Frame = +2
Query: 32 AMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPP----IRRGD----------GPI-ALV 166
A GK+++G A+TGSGKTLA+ LP + + + + R D P+ AL+
Sbjct: 177 AHQGKDVIGAAETGSGKTLAFGLPILQRLLEEQEKAMRLSREDESTQDENSRESPLRALI 236
Query: 167 LAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL 346
L PTRELA+Q+ E ++ + GG +Q R L+R EIV+ TPGRL + +
Sbjct: 237 LTPTRELAKQVCDHLKEAAKFLRIQVVPIVGGLSMEKQERLLKRKPEIVVGTPGRLWELM 296
Query: 347 EKGTTN---LQRCTYLVLDEADRMLDMGFEPQIRKIIDQI 457
G + L ++ VLDEADRM++ G +++ II+ +
Sbjct: 297 STGNQHLIKLHSLSFFVLDEADRMIERGHFHELQSIIEML 336
>02_05_0064 - 25529630-25531440,25531663-25531673,25533113-25533198,
25533412-25534259,25535385-25535736
Length = 1035
Score = 79.4 bits (187), Expect = 2e-15
Identities = 51/159 (32%), Positives = 81/159 (50%), Gaps = 8/159 (5%)
Frame = +2
Query: 5 EVQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHIN------NQPPIRRGDGPIALV 166
EVQ+ PI + V + TGSGKTLAY+LP + I Q + G A++
Sbjct: 618 EVQSAAIPIISQKHDAVIQSYTGSGKTLAYLLPILSEIGPLKRPTEQDSSDKRSGVEAVI 677
Query: 167 LAPTRELAQQI-QQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEI-VIATPGRLID 340
+AP+REL QI ++V G + + GGA + Q L++ I V+ TPGR+ +
Sbjct: 678 VAPSRELGMQIVREVEKILGPNDKRLVQQLVGGANRSRQEEALKKNKPIIVVGTPGRISE 737
Query: 341 FLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQI 457
G + C +LVLDE D++L + + +I++ +
Sbjct: 738 ISAAGKLHTHSCRFLVLDEVDQLLSFNYREDMHRILEHV 776
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 79.0 bits (186), Expect = 3e-15
Identities = 49/147 (33%), Positives = 79/147 (53%)
Frame = +2
Query: 8 VQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 187
+Q Q PI +SG+ A TGSGKTLA++ P ++ I +P + +G A++L PTREL
Sbjct: 172 IQRQAIPILLSGRECFACAPTGSGKTLAFLFPILMKI--KPGSK--EGVKAVILCPTREL 227
Query: 188 AQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 367
A Q + + + K +D+ +I+I+TP RL ++K +L
Sbjct: 228 AAQTTRECKKLAKGRKFYIKLMTKDLSKSGNFKDMH--CDILISTPLRLDHAVQKRDLDL 285
Query: 368 QRCTYLVLDEADRMLDMGFEPQIRKII 448
R YLVLDE+D++ ++GF I ++
Sbjct: 286 SRVEYLVLDESDKLFELGFVEVIDSVV 312
>03_02_0189 - 6253659-6255380
Length = 573
Score = 79.0 bits (186), Expect = 3e-15
Identities = 52/159 (32%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Frame = +2
Query: 5 EVQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHIN--NQPPIRRGD----GPIALV 166
EVQ+ PI + V + TGSGKTLAY+LP + I +P + G G A++
Sbjct: 156 EVQSAAIPIISQKHDAVIQSYTGSGKTLAYLLPILSEIGPLKRPTEQDGSDKRSGVEAVI 215
Query: 167 LAPTRELAQQI-QQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVE-IVIATPGRLID 340
+AP+REL QI ++V G + + GGA + Q L++ IV+ TPGR+ +
Sbjct: 216 VAPSRELGMQIVREVEKILGPNDKRLVQQLVGGANRSRQEEALKKNKPLIVVGTPGRISE 275
Query: 341 FLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQI 457
G + C +LVLDE D++L + + +I++ +
Sbjct: 276 ISAGGKLHTHGCRFLVLDEVDQLLSFNYREDMHRILEHV 314
>01_05_0295 +
20537147-20537291,20539111-20539283,20539365-20539596,
20539743-20539861,20540480-20540536,20540615-20540799,
20542252-20542396,20542463-20542546,20542634-20542697,
20542799-20542809
Length = 404
Score = 78.2 bits (184), Expect = 5e-15
Identities = 52/176 (29%), Positives = 90/176 (51%), Gaps = 3/176 (1%)
Frame = +2
Query: 5 EVQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRE 184
+VQ + P A+ G +++ A++G GKT ++L ++ I+ P+ G ALVL TRE
Sbjct: 48 KVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQID---PVAGQVG--ALVLCHTRE 102
Query: 185 LAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERG--VEIVIATPGRLIDFLEKGT 358
LA QI F VF G ++ +DL + IV+ TPGR++ +
Sbjct: 103 LAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCPHIVVGTPGRILALAREKD 162
Query: 359 TNLQRCTYLVLDEADRMLD-MGFEPQIRKIIDQIRPDRQTLMWSGNMAKRSKETCR 523
+L+ + +LDE D+MLD + +++I D+Q +M+S ++K + C+
Sbjct: 163 LSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCK 218
>01_05_0296 +
20567259-20567386,20568895-20569123,20569205-20569436,
20569583-20569701,20570321-20570377,20570455-20570639,
20571416-20571560,20571630-20571713,20571798-20571861,
20571889-20571932
Length = 428
Score = 77.8 bits (183), Expect = 6e-15
Identities = 52/175 (29%), Positives = 89/175 (50%), Gaps = 3/175 (1%)
Frame = +2
Query: 8 VQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 187
VQ + P A+ G +++ A++G GKT ++L ++ I+ P+ G ALVL TREL
Sbjct: 62 VQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQID---PVAGQVG--ALVLCHTREL 116
Query: 188 AQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERG--VEIVIATPGRLIDFLEKGTT 361
A QI F VF G ++ +DL + IV+ TPGR++ +
Sbjct: 117 AYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCPHIVVGTPGRILALAREKDL 176
Query: 362 NLQRCTYLVLDEADRMLD-MGFEPQIRKIIDQIRPDRQTLMWSGNMAKRSKETCR 523
+L+ + +LDE D+MLD + +++I D+Q +M+S ++K + C+
Sbjct: 177 SLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCK 231
>07_03_0601 -
19872780-19873099,19873148-19873151,19874196-19874357,
19874429-19874617,19874687-19875010,19875103-19875378,
19875436-19875478,19876110-19876188,19876473-19876555,
19876708-19876782,19877324-19877490,19877960-19878370
Length = 710
Score = 76.2 bits (179), Expect = 2e-14
Identities = 39/127 (30%), Positives = 68/127 (53%), Gaps = 1/127 (0%)
Frame = +2
Query: 146 DGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATP 325
DG +VL+P ++LA QI V + G C+ G ++ + + + I++ TP
Sbjct: 300 DGVGCIVLSPNKDLAGQIFNVFQKVGKLHGFSAACIVGNRKGLDEEKAVINNMNILVCTP 359
Query: 326 GRLIDFLEKGTT-NLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSGNMAK 502
GRL+ + + T + + LV+DEAD++LD F+ Q+ ++ Q+ RQTL++S K
Sbjct: 360 GRLLQHMGETTNFDCSQIQILVIDEADQVLDKNFQEQVDNVVSQLPKVRQTLLFSATQTK 419
Query: 503 RSKETCR 523
K+ R
Sbjct: 420 SVKDLAR 426
Score = 41.5 bits (93), Expect = 5e-04
Identities = 16/36 (44%), Positives = 28/36 (77%)
Frame = +2
Query: 5 EVQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIV 112
E+Q P A+ G++++G A+TGSGKTLA+++P ++
Sbjct: 105 EIQRAALPHALCGRDVLGAAKTGSGKTLAFVIPVLM 140
>01_07_0333 -
42813789-42814073,42814229-42814315,42815083-42815172,
42815555-42815623,42815859-42815888,42816060-42816164,
42816454-42816549,42816647-42816760,42816862-42816955,
42817027-42817190
Length = 377
Score = 71.3 bits (167), Expect = 5e-13
Identities = 48/134 (35%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
Frame = +2
Query: 5 EVQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTR 181
EVQ Q P+ +SG++ + AQTGSGKTLAY+L I+ G + ALV+ PTR
Sbjct: 66 EVQEQSLPVLLSGQDCILHAQTGSGKTLAYLLSVFSAIDF------GRSSVQALVVVPTR 119
Query: 182 ELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTT 361
EL Q+ +VA + + GG +R+++ I++AT L +EK
Sbjct: 120 ELGMQVTKVARILAAKACTVMALLDGGMLRRQKSWVKAEPPAIIVATVASLCQMIEKRAF 179
Query: 362 NLQRCTYLVLDEAD 403
+LQ LV+DE D
Sbjct: 180 SLQSMRVLVIDEVD 193
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 68.5 bits (160), Expect = 4e-12
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 9/108 (8%)
Frame = +2
Query: 8 VQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAI-VHINNQ--PPIRRGDGPIALVLAPT 178
+Q Q P+ +SG++++G+A TGSGKTL ++LP I V + + PI G+GP +++ P+
Sbjct: 208 IQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPS 267
Query: 179 RELAQQIQQVASEF----GNSSY--VRNTCVFGGAPKREQARDLERGV 304
RELA+Q V +F + Y +R GG R Q +++G+
Sbjct: 268 RELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIGGVDMRAQLDVVKKGL 315
>02_02_0099 + 6768115-6768285,6769950-6770034,6770501-6770628,
6771429-6771465,6773108-6774193,6774337-6774447,
6774701-6774817,6774818-6775120,6776092-6776513,
6776645-6777274
Length = 1029
Score = 62.9 bits (146), Expect = 2e-10
Identities = 39/122 (31%), Positives = 56/122 (45%)
Frame = +2
Query: 158 ALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 337
ALVL PT +LA + Q V G + GG E + L GV++ + TP ++
Sbjct: 730 ALVLVPTHDLAHETQNVIGVLGQFLSAKAHAFCGGTSAHEDQQILSTGVQVAVGTPCHVL 789
Query: 338 DFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSGNMAKRSKET 517
L+ VLDEAD +L GF+ QI II + Q +S +M+ + E
Sbjct: 790 GMLQGRALCPDHIRMFVLDEADEVL-RGFKDQIHGIIQFLPTKTQFGFFSASMSHEALEM 848
Query: 518 CR 523
CR
Sbjct: 849 CR 850
>02_05_1067 -
33858215-33858321,33858422-33858527,33859014-33859218,
33859463-33859650,33859780-33859957,33860201-33860298,
33860619-33860873,33861002-33861236,33861846-33861973
Length = 499
Score = 58.4 bits (135), Expect = 4e-09
Identities = 54/162 (33%), Positives = 78/162 (48%), Gaps = 23/162 (14%)
Frame = +2
Query: 68 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV------------A 211
TGSGKTLAY LP + + R+ ALV+ PTR+LA Q+++V
Sbjct: 83 TGSGKTLAYALPIVQMLAT----RKVRCLRALVVLPTRDLALQVKEVFDAIAPVVGLSVG 138
Query: 212 SEFGNSSY---VRNTC------VFGGAPKREQARDLERGVEIVIATPGRLIDFLE--KGT 358
S G SS V N +F + + + V+I++ATPGRL+D + KG
Sbjct: 139 SAVGQSSIADEVSNLIEKSKQGLFPSLDEEYIQMEPQTKVDILVATPGRLMDHISMTKGF 198
Query: 359 TNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMW 484
+ L+ YLV+DE DRML ++ + +I R Q W
Sbjct: 199 S-LEHLQYLVVDETDRMLREAYQSWLPTVIQLTRSSDQNHSW 239
>03_05_0997 +
29565311-29565664,29566134-29566298,29566572-29566661,
29566763-29566891,29568141-29568272,29568904-29568969,
29569326-29569505,29569664-29569693,29569744-29569839,
29569959-29570096,29571060-29571142,29571447-29571484,
29571568-29571788,29572491-29572538
Length = 589
Score = 56.4 bits (130), Expect = 2e-08
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 5/121 (4%)
Frame = +2
Query: 8 VQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILP---AIVHINNQPPIRRGDGPIALVLAPT 178
+Q + P+ + GK++V A+TGSGKT AY+LP ++ ++ + IR+ P +L PT
Sbjct: 109 IQREAIPLILEGKDVVAKAKTGSGKTFAYLLPMLHELLKLSAEGRIRK-SAPNVFILVPT 167
Query: 179 RELAQQIQQVASEFGN--SSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEK 352
REL QQ+ AS +S ++ V ++ L I++ TP + + K
Sbjct: 168 RELCQQVHNEASSLLEFCTSKLKVVQVNASMSDKDIKVALSGPPNILVTTPACVASCISK 227
Query: 353 G 355
G
Sbjct: 228 G 228
>03_01_0399 +
3097878-3098141,3098254-3098547,3098659-3098886,
3099148-3099224,3099501-3099540,3099737-3099802,
3100305-3100706,3100777-3100888,3101445-3101530,
3101607-3101672
Length = 544
Score = 51.6 bits (118), Expect = 5e-07
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 2/125 (1%)
Frame = +2
Query: 44 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFG 223
K+L+ A GSGKT ++L + ++ + + A+ + PTRELAQQ + V G
Sbjct: 141 KDLIAQAHNGSGKTTCFVLGMLSRVDPNRKVTQ-----AICICPTRELAQQNKSVLMRMG 195
Query: 224 NSSYVRNTCVFGGAPKR--EQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 397
+ + C A K A+ + ++VI T G L+ ++ LV DE
Sbjct: 196 KFTGITCACAIPPAQKDYVPIAKMPKITDQVVIGTSGTLMKWINHKKILTNDIKILVFDE 255
Query: 398 ADRML 412
AD ML
Sbjct: 256 ADHML 260
>10_08_0429 +
17845303-17845431,17845508-17845684,17845782-17845895,
17846386-17846520,17847659-17847790,17847919-17848071,
17848574-17848709,17849338-17849443,17849538-17849730,
17849803-17849963,17850227-17850442,17850732-17850997,
17851505-17851779,17851871-17852327,17853973-17854055,
17854260-17854469,17854897-17855373,17855462-17855743,
17855910-17856236,17856418-17856507,17856788-17856899,
17857004-17857104,17857524-17857568
Length = 1458
Score = 46.0 bits (104), Expect = 2e-05
Identities = 43/148 (29%), Positives = 62/148 (41%), Gaps = 4/148 (2%)
Frame = +2
Query: 47 NLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP--IALVLAPTRELAQQIQQVASEF 220
N + V TGSGKT+ ++ A H +R G+ P I + LAPT L Q +V E+
Sbjct: 54 NTIAVLDTGSGKTMVAVMLAREHARR---VRAGEAPRRIVVFLAPTVHLVHQQFEVIREY 110
Query: 221 GNSSYVR--NTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 394
+ + G ++ R EIV+ TP L+D L + + L+ D
Sbjct: 111 TDLDVMMCSGASRVGEWGADHWKEEVGRN-EIVVMTPQILLDALRHAFLTMSAVSLLIFD 169
Query: 395 EADRMLDMGFEPQIRKIIDQIRPDRQTL 478
E R G P R + I DR L
Sbjct: 170 ECHRA--CGSHPYARIMKIYIVEDRNEL 195
>03_01_0059 +
484305-484617,484919-485406,485608-486092,486185-486461,
486495-486626,486721-486893,486982-487204
Length = 696
Score = 44.8 bits (101), Expect = 5e-05
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Frame = +2
Query: 164 VLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDF 343
VL T ++Q + S + R+ GG ++ Q L++ ++++IATPGR +
Sbjct: 357 VLIGTFLISQVLNNCRSISKSGVPFRSMVATGGFRQKTQLESLDQELDVLIATPGRFLYL 416
Query: 344 LEKGTTNLQRCTYLVLDEADRML-DMGFEPQIRKII 448
L++G L +VLDE D + + FE + ++I
Sbjct: 417 LQEGFVQLNNLRCVVLDEVDILYGEESFEQVLHQLI 452
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +2
Query: 8 VQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQ--PPIRRGD--GPIALVLAP 175
+QA + + GK+ + Q+GSGKTLAY+ P + ++ + + R P +VL P
Sbjct: 266 IQAMAYRPVLEGKSCIIGDQSGSGKTLAYLCPVVQNLRKEEVEGLHRSSPRNPRVVVLTP 325
Query: 176 TRELAQQI 199
T ELA Q+
Sbjct: 326 TAELASQV 333
>09_03_0167 +
12965030-12965356,12966100-12966387,12966704-12966826,
12967229-12967611,12967863-12968190,12968324-12968353,
12968837-12968989,12969510-12969815
Length = 645
Score = 41.5 bits (93), Expect = 5e-04
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 11/124 (8%)
Frame = +2
Query: 8 VQAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI---------NNQPPIRRGDGPIA 160
VQA P ++ +++ A+TGSGKT Y++P I + N + G IA
Sbjct: 108 VQAACIPHVLTTNDVIVAAETGSGKTHGYLVPLIEKLCSKSISAEDGNSQDVTSGSPNIA 167
Query: 161 LVLAPTRELAQQIQQVASEFGNSS--YVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 334
LVL P L +Q+ ++A+ + S +++ G R +I++ATP L
Sbjct: 168 LVLCPNVMLCEQVVRMANSLVDESGEPLKSAAAVCGPKGWPTVRP-----DILVATPAAL 222
Query: 335 IDFL 346
+++L
Sbjct: 223 LNYL 226
>09_02_0405 -
8597807-8598045,8599218-8599284,8599571-8599636,
8599731-8599795,8600514-8600872,8601118-8601125,
8601567-8601656,8601770-8601962,8603518-8603608,
8603948-8604080,8605340-8605480,8605601-8605662,
8605743-8605830,8606107-8606536,8606651-8606757
Length = 712
Score = 39.1 bits (87), Expect = 0.003
Identities = 39/122 (31%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
Frame = +2
Query: 47 NLVGVAQTGSGKTL--AYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 220
N + +TGSGKTL +L A H +P RR A+ L PT L Q +V +
Sbjct: 49 NTLAFLETGSGKTLIAVMLLRAYAHRVRRPDSRR----FAVFLVPTVVLVGQQARVVEQH 104
Query: 221 GNSSYVRNTCVFGGAPKREQA---RDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 391
V+ C G + A LE G E+++ TP L+D L LQ L+
Sbjct: 105 -TDLVVKQFCGEMGVDFWDAATWRSQLEDG-EVLVMTPQILLDNLRHSFFRLQDIALLIF 162
Query: 392 DE 397
DE
Sbjct: 163 DE 164
>03_05_0155 -
21307001-21307239,21308217-21308320,21308564-21308772,
21308773-21308838,21308933-21308997,21309716-21309942,
21310156-21310269,21310515-21310522,21310964-21311053,
21311167-21311359,21312934-21313024,21313364-21313496,
21314756-21314896,21315017-21315078,21315159-21315246,
21315523-21315952,21316067-21316173
Length = 788
Score = 39.1 bits (87), Expect = 0.003
Identities = 39/122 (31%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
Frame = +2
Query: 47 NLVGVAQTGSGKTL--AYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 220
N + +TGSGKTL +L A H +P RR A+ L PT L Q +V +
Sbjct: 49 NTLAFLETGSGKTLIAVMLLRAYAHRVRRPDSRR----FAVFLVPTVVLVGQQARVVEQH 104
Query: 221 GNSSYVRNTCVFGGAPKREQA---RDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 391
V+ C G + A LE G E+++ TP L+D L LQ L+
Sbjct: 105 -TDLVVKQFCGEMGVDFWDAATWRSQLEDG-EVLVMTPQILLDNLRHSFFRLQDIALLIF 162
Query: 392 DE 397
DE
Sbjct: 163 DE 164
>12_01_0308 +
2318010-2318708,2318802-2318890,2319006-2319105,
2319349-2319606,2319875-2319955,2319956-2320125,
2320358-2320628
Length = 555
Score = 37.9 bits (84), Expect = 0.006
Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 1/119 (0%)
Frame = +2
Query: 152 PIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLER-GVEIVIATPG 328
P L L P++E A Q++ + S + + + GA Q L+ E +I+TP
Sbjct: 219 PFLLYLVPSQEKAVQVRSICKPL-KSLGIHSVSLHPGASIEHQISGLKSCEPEFLISTPE 277
Query: 329 RLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSGNMAKR 505
RL++ + ++ + LV+D D+ ++ I D I + Q ++S +R
Sbjct: 278 RLLELIALKAIDISGVSMLVIDGLKCFTDLNVSDKLCSIRDAILSNPQITIFSDPSDRR 336
>02_01_0091 + 646299-649082
Length = 927
Score = 37.1 bits (82), Expect = 0.011
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = +2
Query: 11 QAQ*WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 190
QAQ A+SG+++V T SGK+L Y +P + I+ + P AL + PT+ LA
Sbjct: 192 QAQAVQSAVSGEHVVVSTSTSSGKSLCYNIPVLESIS------QSSAPCALYIFPTKALA 245
Query: 191 Q 193
Q
Sbjct: 246 Q 246
>11_08_0102 -
28354880-28355056,28355159-28355376,28355634-28355712,
28356451-28356519,28356602-28356681,28356818-28356925,
28357103-28357169,28357894-28357959,28358042-28358119,
28358198-28358250,28359542-28359575,28359851-28359865,
28360082-28360109,28360628-28360716,28361688-28361810,
28362192-28362296,28362381-28362485,28362924-28363139,
28364656-28364845,28365193-28365418,28366096-28366162
Length = 730
Score = 33.1 bits (72), Expect = 0.17
Identities = 22/68 (32%), Positives = 35/68 (51%)
Frame = +2
Query: 35 MSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAS 214
MSG++++ + G GK+L Y LPA++H DG I LV++P L Q +
Sbjct: 118 MSGRDVLVIMAAGGGKSLCYQLPAVLH----------DG-ITLVVSPLLSLIQDQVMGLA 166
Query: 215 EFGNSSYV 238
G +Y+
Sbjct: 167 ALGIQAYM 174
>08_01_0117 +
941334-941339,941720-941906,942444-942565,942648-942656,
942965-943067,943204-943247,943487-943516,943615-943737,
943816-943841,943934-944015,944137-944178,944259-944292,
944424-944451,944779-945022,945023-945124,945318-945443,
945533-945715,945803-945961
Length = 549
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 32 AMSGKN--LVGVAQTGSGKTLAYILPAIVHINNQ 127
A+SG N ++ QTG+GKT + P+I+H N Q
Sbjct: 144 AISGINGTIITYGQTGAGKTYSMEGPSILHCNKQ 177
>11_05_0063 -
18756289-18756390,18756769-18756954,18757053-18757223,
18757339-18757383,18758087-18758260,18758801-18758887,
18759349-18759510,18759945-18760015,18760296-18760435,
18760828-18760952,18761329-18761463,18762069-18762314,
18762530-18762755,18763039-18763091
Length = 640
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +2
Query: 158 ALVLAPTRELAQQIQQVASE-FGNSSYVRNTCVFGGAPKREQARDL 292
A+VLAPT LA+Q V SE F N ++ +F GA +E+ +L
Sbjct: 139 AMVLAPTVILAKQHYDVMSERFSNYPDIK-VAMFSGAQTKEEKDEL 183
>05_05_0174 -
22960732-22960815,22960907-22961419,22961576-22962058,
22964191-22964673
Length = 520
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 219 NSEATCCIC*ASSLVGARTNAIGPS-PRRM 133
+S C + SSL+G RT IGP+ PRR+
Sbjct: 371 HSSPVCSLSGLSSLLGFRTRGIGPTEPRRL 400
>05_04_0355 -
20577189-20577275,20578001-20578129,20578252-20578371,
20578505-20578741,20578983-20579258,20579375-20579508,
20580006-20581632
Length = 869
Score = 28.7 bits (61), Expect = 3.7
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Frame = -3
Query: 435 ICGSKPISNMRSASSRTK*VHLCKFVVPFSKK--SINLPGVAITIS---TPLSKSRACSL 271
I P S SAS+ + LC VPFS+ +LP IS +P + SR+ +
Sbjct: 45 IASLPPASASASASAASLRCPLCSQCVPFSRALGPSSLPKNLALISLLPSPPNPSRSRTA 104
Query: 270 LGAPPNTHV 244
APP HV
Sbjct: 105 AAAPPPPHV 113
>06_01_0449 -
3176135-3176329,3176531-3177289,3177420-3177905,
3178302-3178421,3178637-3178703,3178784-3179007,
3179149-3179234,3179936-3180509
Length = 836
Score = 27.9 bits (59), Expect = 6.5
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Frame = -3
Query: 468 LSGRIWSIIFLICGSKPISNMRSASSRTK*VHLCKFVVPFSKKSINLPGVA---ITISTP 298
LSG +W+I+ I + S S S++ + F+ P S+ ++ P +A T
Sbjct: 731 LSGEVWAIVEAIRDAALSSPSSSRSAQDQNSPPSYFICPISQDIMDDPHIAADGFTYEAE 790
Query: 297 LSKSRACSLLGAPPNTHVLRT*DEL-PN 217
+S C+ P T++L +EL PN
Sbjct: 791 AIRSWLCNGHDTSPMTNLLLEHEELIPN 818
>06_02_0042 -
10901321-10901486,10903417-10903517,10903696-10903894,
10904642-10904769
Length = 197
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2
Query: 362 NLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQ 472
N++R +L+L+E MLD +I KI DQ R DR+
Sbjct: 64 NVKRGIFLILEEP--MLDFKSLSEIGKIADQGRSDRR 98
>05_07_0003 +
26981956-26982190,26982258-26982318,26982739-26982833,
26983304-26983479,26983738-26983959,26984041-26984279,
26984786-26985311,26985407-26985680,26985759-26986410,
26986508-26986736,26986841-26987107,26987180-26987443,
26987526-26988194
Length = 1302
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 383 LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLM 481
L+LDEA LDM E +++ +++I D+ T++
Sbjct: 552 LLLDEATSALDMESERVVQEALNRIMQDKTTIV 584
>04_04_0861 +
28836544-28836609,28838191-28838264,28838551-28838671,
28838832-28839143,28839241-28839345,28839447-28839901,
28840116-28840417,28840589-28840767,28841256-28841446,
28841595-28841728,28841875-28842113
Length = 725
Score = 27.5 bits (58), Expect = 8.5
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 414 IWVLSHKLGKLSTKYALIGKLLCGLATWPKEVRKLAEDYLGDYVQITIGSLQLSA 578
++ L++ L L+ LIG+LLCGL + R + Y+ D V + I LQ SA
Sbjct: 357 LYALAYDLNSLTV--LLIGRLLCGLGS----ARAVNRRYISDCVPLKI-RLQASA 404
>04_03_1025 + 21803807-21805249
Length = 480
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 218 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 334
FGNS+ V CV P+ E AR R V+A GR+
Sbjct: 325 FGNSAAVFEECVIKTVPRAEGARKSARN---VVAANGRI 360
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,977,046
Number of Sequences: 37544
Number of extensions: 355391
Number of successful extensions: 984
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1411925004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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