Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_O18
         (390 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   6.6  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          20   8.7  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          20   8.7  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          20   8.7  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          20   8.7  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          20   8.7  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          20   8.7  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          20   8.7  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    20   8.7  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    20   8.7  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            20   8.7  

>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 319 FRNKFKKTSEKVLIWPH 269
           +R  FKK  E+ +  PH
Sbjct: 259 YRRNFKKMQEEKIFEPH 275


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -1

Query: 360 NSENTNRTFGL*KSLETN 307
           N+ NT++TF L + LE++
Sbjct: 89  NASNTSKTFILSEKLESS 106


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -1

Query: 360 NSENTNRTFGL*KSLETN 307
           N+ NT++TF L + LE++
Sbjct: 89  NASNTSKTFILSEKLESS 106


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -1

Query: 360 NSENTNRTFGL*KSLETN 307
           N+ NT++TF L + LE++
Sbjct: 89  NASNTSKTFILSEKLESS 106


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -1

Query: 360 NSENTNRTFGL*KSLETN 307
           N+ NT++TF L + LE++
Sbjct: 89  NASNTSKTFILSEKLESS 106


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -1

Query: 360 NSENTNRTFGL*KSLETN 307
           N+ NT++TF L + LE++
Sbjct: 89  NASNTSKTFILSEKLESS 106


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -1

Query: 360 NSENTNRTFGL*KSLETN 307
           N+ NT++TF L + LE++
Sbjct: 89  NASNTSKTFILSEKLESS 106


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -1

Query: 360 NSENTNRTFGL*KSLETN 307
           N+ NT++TF L + LE++
Sbjct: 89  NASNTSKTFILSEKLESS 106


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -1

Query: 360 NSENTNRTFGL*KSLETN 307
           N+ NT++TF L + LE++
Sbjct: 89  NASNTSKTFILSEKLESS 106


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 345 NRTFGL*KSLETNLKKHLKKYLFG 274
           + TFG  K++E ++K H    + G
Sbjct: 266 HETFGSKKTMELHIKTHSDSSVVG 289


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 6/22 (27%), Positives = 14/22 (63%)
 Frame = -2

Query: 218 HEMSEPRRCTRSRITNFVNTKV 153
           H++ + +   RS++ +F+N  V
Sbjct: 176 HDLDQSQEYVRSKLVDFLNDLV 197


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,902
Number of Sequences: 438
Number of extensions: 1150
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9514659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)