BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_O14
(518 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X61923-1|CAA43925.1| 266|Homo sapiens ribosomal protein L7a pro... 142 5e-34
X52138-1|CAA36383.1| 266|Homo sapiens L7a protein protein. 142 5e-34
X06705-1|CAA29889.1| 266|Homo sapiens protein ( Human PLA-X mRN... 142 5e-34
M36072-1|AAA60282.1| 266|Homo sapiens RPL7A protein. 142 5e-34
BC105290-1|AAI05291.1| 266|Homo sapiens ribosomal protein L7a p... 142 5e-34
BC073802-1|AAH73802.1| 266|Homo sapiens ribosomal protein L7a p... 142 5e-34
BC071901-1|AAH71901.1| 266|Homo sapiens ribosomal protein L7a p... 142 5e-34
BC071900-1|AAH71900.1| 266|Homo sapiens ribosomal protein L7a p... 142 5e-34
BC023624-1|AAH23624.1| 266|Homo sapiens ribosomal protein L7a p... 142 5e-34
BC023594-1|AAH23594.1| 266|Homo sapiens ribosomal protein L7a p... 142 5e-34
BC021979-1|AAH21979.1| 266|Homo sapiens ribosomal protein L7a p... 142 5e-34
BC005128-1|AAH05128.1| 266|Homo sapiens ribosomal protein L7a p... 142 5e-34
AL158826-9|CAI12833.1| 191|Homo sapiens ribosomal protein L7a p... 142 5e-34
AL158826-8|CAI12832.1| 266|Homo sapiens ribosomal protein L7a p... 142 5e-34
S65762-1|AAB28324.1| 1252|Homo sapiens beta-fodrin protein. 29 7.4
M96803-1|AAA60580.1| 2364|Homo sapiens beta-spectrin protein. 29 7.4
AF327441-1|AAO15362.1| 2155|Homo sapiens beta-spectrin 2 isoform... 29 7.4
AC093110-1|AAY24229.1| 2314|Homo sapiens unknown protein. 29 7.4
AB209748-1|BAD92985.1| 2377|Homo sapiens spectrin, beta, non-ery... 29 7.4
AF137377-1|AAD33730.1| 606|Homo sapiens calcium channel beta2a ... 29 9.8
AF137376-1|AAD33729.1| 660|Homo sapiens calcium channel beta2c ... 29 9.8
>X61923-1|CAA43925.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 142 bits (345), Expect = 5e-34
Identities = 66/112 (58%), Positives = 79/112 (70%)
Frame = +2
Query: 182 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLTVPPPINQFTQTLDKT 361
LFEKR KNF IGQDIQP RDL+RFV+WP+YIR+QRQ+A+L +RL VPP INQFTQ LD+
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 362 TAKGLFKILEKYRPETEAVRKERLTXXXXXXXXXXDEPSPKRPNTLRAGTNT 517
TA L K+ KYRPET+ +K+RL + KRP LRAG NT
Sbjct: 91 TATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNT 142
>X52138-1|CAA36383.1| 266|Homo sapiens L7a protein protein.
Length = 266
Score = 142 bits (345), Expect = 5e-34
Identities = 66/112 (58%), Positives = 79/112 (70%)
Frame = +2
Query: 182 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLTVPPPINQFTQTLDKT 361
LFEKR KNF IGQDIQP RDL+RFV+WP+YIR+QRQ+A+L +RL VPP INQFTQ LD+
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 362 TAKGLFKILEKYRPETEAVRKERLTXXXXXXXXXXDEPSPKRPNTLRAGTNT 517
TA L K+ KYRPET+ +K+RL + KRP LRAG NT
Sbjct: 91 TATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNT 142
>X06705-1|CAA29889.1| 266|Homo sapiens protein ( Human PLA-X mRNA.
).
Length = 266
Score = 142 bits (345), Expect = 5e-34
Identities = 66/112 (58%), Positives = 79/112 (70%)
Frame = +2
Query: 182 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLTVPPPINQFTQTLDKT 361
LFEKR KNF IGQDIQP RDL+RFV+WP+YIR+QRQ+A+L +RL VPP INQFTQ LD+
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 362 TAKGLFKILEKYRPETEAVRKERLTXXXXXXXXXXDEPSPKRPNTLRAGTNT 517
TA L K+ KYRPET+ +K+RL + KRP LRAG NT
Sbjct: 91 TATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNT 142
>M36072-1|AAA60282.1| 266|Homo sapiens RPL7A protein.
Length = 266
Score = 142 bits (345), Expect = 5e-34
Identities = 66/112 (58%), Positives = 79/112 (70%)
Frame = +2
Query: 182 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLTVPPPINQFTQTLDKT 361
LFEKR KNF IGQDIQP RDL+RFV+WP+YIR+QRQ+A+L +RL VPP INQFTQ LD+
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 362 TAKGLFKILEKYRPETEAVRKERLTXXXXXXXXXXDEPSPKRPNTLRAGTNT 517
TA L K+ KYRPET+ +K+RL + KRP LRAG NT
Sbjct: 91 TATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNT 142
>BC105290-1|AAI05291.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 142 bits (345), Expect = 5e-34
Identities = 66/112 (58%), Positives = 79/112 (70%)
Frame = +2
Query: 182 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLTVPPPINQFTQTLDKT 361
LFEKR KNF IGQDIQP RDL+RFV+WP+YIR+QRQ+A+L +RL VPP INQFTQ LD+
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 362 TAKGLFKILEKYRPETEAVRKERLTXXXXXXXXXXDEPSPKRPNTLRAGTNT 517
TA L K+ KYRPET+ +K+RL + KRP LRAG NT
Sbjct: 91 TATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNT 142
>BC073802-1|AAH73802.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 142 bits (345), Expect = 5e-34
Identities = 66/112 (58%), Positives = 79/112 (70%)
Frame = +2
Query: 182 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLTVPPPINQFTQTLDKT 361
LFEKR KNF IGQDIQP RDL+RFV+WP+YIR+QRQ+A+L +RL VPP INQFTQ LD+
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 362 TAKGLFKILEKYRPETEAVRKERLTXXXXXXXXXXDEPSPKRPNTLRAGTNT 517
TA L K+ KYRPET+ +K+RL + KRP LRAG NT
Sbjct: 91 TATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNT 142
>BC071901-1|AAH71901.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 142 bits (345), Expect = 5e-34
Identities = 66/112 (58%), Positives = 79/112 (70%)
Frame = +2
Query: 182 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLTVPPPINQFTQTLDKT 361
LFEKR KNF IGQDIQP RDL+RFV+WP+YIR+QRQ+A+L +RL VPP INQFTQ LD+
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 362 TAKGLFKILEKYRPETEAVRKERLTXXXXXXXXXXDEPSPKRPNTLRAGTNT 517
TA L K+ KYRPET+ +K+RL + KRP LRAG NT
Sbjct: 91 TATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNT 142
>BC071900-1|AAH71900.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 142 bits (345), Expect = 5e-34
Identities = 66/112 (58%), Positives = 79/112 (70%)
Frame = +2
Query: 182 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLTVPPPINQFTQTLDKT 361
LFEKR KNF IGQDIQP RDL+RFV+WP+YIR+QRQ+A+L +RL VPP INQFTQ LD+
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 362 TAKGLFKILEKYRPETEAVRKERLTXXXXXXXXXXDEPSPKRPNTLRAGTNT 517
TA L K+ KYRPET+ +K+RL + KRP LRAG NT
Sbjct: 91 TATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNT 142
>BC023624-1|AAH23624.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 142 bits (345), Expect = 5e-34
Identities = 66/112 (58%), Positives = 79/112 (70%)
Frame = +2
Query: 182 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLTVPPPINQFTQTLDKT 361
LFEKR KNF IGQDIQP RDL+RFV+WP+YIR+QRQ+A+L +RL VPP INQFTQ LD+
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 362 TAKGLFKILEKYRPETEAVRKERLTXXXXXXXXXXDEPSPKRPNTLRAGTNT 517
TA L K+ KYRPET+ +K+RL + KRP LRAG NT
Sbjct: 91 TATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNT 142
>BC023594-1|AAH23594.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 142 bits (345), Expect = 5e-34
Identities = 66/112 (58%), Positives = 79/112 (70%)
Frame = +2
Query: 182 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLTVPPPINQFTQTLDKT 361
LFEKR KNF IGQDIQP RDL+RFV+WP+YIR+QRQ+A+L +RL VPP INQFTQ LD+
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 362 TAKGLFKILEKYRPETEAVRKERLTXXXXXXXXXXDEPSPKRPNTLRAGTNT 517
TA L K+ KYRPET+ +K+RL + KRP LRAG NT
Sbjct: 91 TATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNT 142
>BC021979-1|AAH21979.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 142 bits (345), Expect = 5e-34
Identities = 66/112 (58%), Positives = 79/112 (70%)
Frame = +2
Query: 182 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLTVPPPINQFTQTLDKT 361
LFEKR KNF IGQDIQP RDL+RFV+WP+YIR+QRQ+A+L +RL VPP INQFTQ LD+
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 362 TAKGLFKILEKYRPETEAVRKERLTXXXXXXXXXXDEPSPKRPNTLRAGTNT 517
TA L K+ KYRPET+ +K+RL + KRP LRAG NT
Sbjct: 91 TATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNT 142
>BC005128-1|AAH05128.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 142 bits (345), Expect = 5e-34
Identities = 66/112 (58%), Positives = 79/112 (70%)
Frame = +2
Query: 182 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLTVPPPINQFTQTLDKT 361
LFEKR KNF IGQDIQP RDL+RFV+WP+YIR+QRQ+A+L +RL VPP INQFTQ LD+
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 362 TAKGLFKILEKYRPETEAVRKERLTXXXXXXXXXXDEPSPKRPNTLRAGTNT 517
TA L K+ KYRPET+ +K+RL + KRP LRAG NT
Sbjct: 91 TATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNT 142
>AL158826-9|CAI12833.1| 191|Homo sapiens ribosomal protein L7a
protein.
Length = 191
Score = 142 bits (345), Expect = 5e-34
Identities = 66/112 (58%), Positives = 79/112 (70%)
Frame = +2
Query: 182 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLTVPPPINQFTQTLDKT 361
LFEKR KNF IGQDIQP RDL+RFV+WP+YIR+QRQ+A+L +RL VPP INQFTQ LD+
Sbjct: 58 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 117
Query: 362 TAKGLFKILEKYRPETEAVRKERLTXXXXXXXXXXDEPSPKRPNTLRAGTNT 517
TA L K+ KYRPET+ +K+RL + KRP LRAG NT
Sbjct: 118 TATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNT 169
>AL158826-8|CAI12832.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 142 bits (345), Expect = 5e-34
Identities = 66/112 (58%), Positives = 79/112 (70%)
Frame = +2
Query: 182 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLTVPPPINQFTQTLDKT 361
LFEKR KNF IGQDIQP RDL+RFV+WP+YIR+QRQ+A+L +RL VPP INQFTQ LD+
Sbjct: 31 LFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQ 90
Query: 362 TAKGLFKILEKYRPETEAVRKERLTXXXXXXXXXXDEPSPKRPNTLRAGTNT 517
TA L K+ KYRPET+ +K+RL + KRP LRAG NT
Sbjct: 91 TATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNT 142
>S65762-1|AAB28324.1| 1252|Homo sapiens beta-fodrin protein.
Length = 1252
Score = 29.5 bits (63), Expect = 7.4
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +2
Query: 350 LDKTTAKGLFKILEKYRPETEAVRKERLT 436
LDK +G+ I EK PETEAV KE+LT
Sbjct: 1038 LDKIEKEGMQLISEK--PETEAVVKEKLT 1064
>M96803-1|AAA60580.1| 2364|Homo sapiens beta-spectrin protein.
Length = 2364
Score = 29.5 bits (63), Expect = 7.4
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +2
Query: 350 LDKTTAKGLFKILEKYRPETEAVRKERLT 436
LDK +G+ I EK PETEAV KE+LT
Sbjct: 1330 LDKIEKEGMQLISEK--PETEAVVKEKLT 1356
>AF327441-1|AAO15362.1| 2155|Homo sapiens beta-spectrin 2 isoform 2
protein.
Length = 2155
Score = 29.5 bits (63), Expect = 7.4
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +2
Query: 350 LDKTTAKGLFKILEKYRPETEAVRKERLT 436
LDK +G+ I EK PETEAV KE+LT
Sbjct: 1317 LDKIEKEGMQLISEK--PETEAVVKEKLT 1343
>AC093110-1|AAY24229.1| 2314|Homo sapiens unknown protein.
Length = 2314
Score = 29.5 bits (63), Expect = 7.4
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +2
Query: 350 LDKTTAKGLFKILEKYRPETEAVRKERLT 436
LDK +G+ I EK PETEAV KE+LT
Sbjct: 1280 LDKIEKEGMQLISEK--PETEAVVKEKLT 1306
>AB209748-1|BAD92985.1| 2377|Homo sapiens spectrin, beta,
non-erythrocytic 1 isoform 1 variant protein.
Length = 2377
Score = 29.5 bits (63), Expect = 7.4
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +2
Query: 350 LDKTTAKGLFKILEKYRPETEAVRKERLT 436
LDK +G+ I EK PETEAV KE+LT
Sbjct: 1343 LDKIEKEGMQLISEK--PETEAVVKEKLT 1369
>AF137377-1|AAD33730.1| 606|Homo sapiens calcium channel beta2a
subunit protein.
Length = 606
Score = 29.1 bits (62), Expect = 9.8
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 220 GHPANQRSIPFRAMAEIYSHPASKGCVTASSHSAAANQPVH 342
GH RS P R+ ++ P+ +G V S H ++++ P H
Sbjct: 445 GHQRTDRSAPIRSASQAEEEPSVEG-VKKSQHRSSSSAPHH 484
>AF137376-1|AAD33729.1| 660|Homo sapiens calcium channel beta2c
subunit protein.
Length = 660
Score = 29.1 bits (62), Expect = 9.8
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 220 GHPANQRSIPFRAMAEIYSHPASKGCVTASSHSAAANQPVH 342
GH RS P R+ ++ P+ +G V S H ++++ P H
Sbjct: 499 GHQRTDRSAPIRSASQAEEEPSVEG-VKKSQHRSSSSAPHH 538
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,485,396
Number of Sequences: 237096
Number of extensions: 1447853
Number of successful extensions: 2772
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2772
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -