Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_O13
(595 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 311 4e-86
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 311 4e-86
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 141 8e-35
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 131 6e-32
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 63 3e-11
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 45 7e-06
SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr 2||... 33 0.024
SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 33 0.024
SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 32 0.055
SPBC146.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.39
SPAC22H12.02 |tfg3|taf14|transcription factor TFIIF complex subu... 29 0.51
SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|... 29 0.68
SPAC21E11.06 |tif224||translation initiation factor eIF2B delta ... 28 0.89
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa... 27 2.1
SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces po... 27 2.7
SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit ... 27 2.7
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 26 3.6
SPCC622.12c |||NADP-specific glutamate dehydrogenase |Schizosacc... 26 3.6
SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr 3||... 26 3.6
SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|c... 26 4.8
SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomy... 26 4.8
SPAC6F12.07 |tom20||mitochondrial TOM complex subunit Tom20|Schi... 25 6.3
SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|c... 25 6.3
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 25 8.3
SPBC1711.12 |||serine peptidase |Schizosaccharomyces pombe|chr 2... 25 8.3
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 311 bits (764), Expect = 4e-86
Identities = 148/195 (75%), Positives = 166/195 (85%)
Frame = +1
Query: 10 KTCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFQPGKKEDLYEK 189
+ CD APLM+YVSKMVPTSD+GRFYAFGRVFSG V +G K RI GPN+ PGKK+DL+ K
Sbjct: 370 RNCDANAPLMIYVSKMVPTSDRGRFYAFGRVFSGTVRSGLKVRIQGPNYVPGKKDDLFIK 429
Query: 190 TIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVV 369
IQRT+LMMG +E IED P+GNI GLVGVDQFLVK+GT+TT + AHNMKVMKFSVSPVV
Sbjct: 430 AIQRTVLMMGSRIEPIEDCPAGNIIGLVGVDQFLVKSGTLTTSEVAHNMKVMKFSVSPVV 489
Query: 370 RIAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDH 549
++AVE KN DLPKLVEGLKRL+KSDP V C ESGEHIVAGAGELHLEICLKDL+EDH
Sbjct: 490 QVAVEVKNGNDLPKLVEGLKRLSKSDPCVLCTTSESGEHIVAGAGELHLEICLKDLQEDH 549
Query: 550 ACIPIKKSDPVVSYR 594
A IP+K S PVVSYR
Sbjct: 550 AGIPLKISPPVVSYR 564
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 311 bits (764), Expect = 4e-86
Identities = 148/195 (75%), Positives = 166/195 (85%)
Frame = +1
Query: 10 KTCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFQPGKKEDLYEK 189
+ CD APLM+YVSKMVPTSD+GRFYAFGRVFSG V +G K RI GPN+ PGKK+DL+ K
Sbjct: 370 RNCDANAPLMIYVSKMVPTSDRGRFYAFGRVFSGTVRSGLKVRIQGPNYVPGKKDDLFIK 429
Query: 190 TIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVV 369
IQRT+LMMG +E IED P+GNI GLVGVDQFLVK+GT+TT + AHNMKVMKFSVSPVV
Sbjct: 430 AIQRTVLMMGSRIEPIEDCPAGNIIGLVGVDQFLVKSGTLTTSEVAHNMKVMKFSVSPVV 489
Query: 370 RIAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDH 549
++AVE KN DLPKLVEGLKRL+KSDP V C ESGEHIVAGAGELHLEICLKDL+EDH
Sbjct: 490 QVAVEVKNGNDLPKLVEGLKRLSKSDPCVLCTTSESGEHIVAGAGELHLEICLKDLQEDH 549
Query: 550 ACIPIKKSDPVVSYR 594
A IP+K S PVVSYR
Sbjct: 550 AGIPLKISPPVVSYR 564
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 141 bits (341), Expect = 8e-35
Identities = 70/176 (39%), Positives = 106/176 (60%), Gaps = 1/176 (0%)
Frame = +1
Query: 70 DKGRFYAFGRVFSGKVVTGQKARIMGPNFQPGKKEDLYEK-TIQRTILMMGRYVEAIEDV 246
DK F R++SG + GQ+ + GP + P E K T++ LMMG+ + +E V
Sbjct: 464 DKDILIGFARIYSGTISVGQEVYVYGPKYDPVNPEKHITKVTVESLYLMMGQELVYLETV 523
Query: 247 PSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRIAVEPKNPADLPKLVEGL 426
P+GN+ + G+ +++T T+ + N N+ + + P+VR+A+EP P ++ KLV GL
Sbjct: 524 PAGNVFAIGGLAGTVLRTATLCSSPNGPNLVGVTQQMEPIVRVALEPVRPFEMNKLVTGL 583
Query: 427 KRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYR 594
L ++DP VQ EE+GEH++ AGE+HLE CLKDL E A I I+ S P+V YR
Sbjct: 584 DMLNQADPCVQIAVEENGEHVIMCAGEIHLERCLKDLRERFAKIEIQASQPLVPYR 639
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 131 bits (317), Expect = 6e-32
Identities = 70/194 (36%), Positives = 112/194 (57%), Gaps = 3/194 (1%)
Frame = +1
Query: 19 DPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFQPGKKEDLYEKTIQ 198
+ APL+M+V+K+ T D FYAF RV+SG+V GQK +++G N+ +ED+ I
Sbjct: 482 EESAPLVMHVTKLYNTVDANNFYAFARVYSGQVKKGQKVKVLGENYSLEDEEDMVVAHIA 541
Query: 199 RTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFK---NAHNMKVMKFSVSPVV 369
+ RY ++ +G + L GVD + KT TI + + + + + V
Sbjct: 542 EICVPCARYRLHVDGAVAGMLVLLGGVDNSISKTATIVSDNLKDDPYIFRPIAHMSESVF 601
Query: 370 RIAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDH 549
++AVEP NP++LPKL++GL++ KS P+ EESGEH + G GE++++ L DL +
Sbjct: 602 KVAVEPHNPSELPKLLDGLRKTNKSYPLSITKVEESGEHTIFGTGEMYMDCLLYDLRTLY 661
Query: 550 ACIPIKKSDPVVSY 591
+ I I+ SDPV +
Sbjct: 662 SEIEIRVSDPVARF 675
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 63.3 bits (147), Expect = 3e-11
Identities = 39/135 (28%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
Frame = +1
Query: 193 IQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVR 372
+ R + M +E IE V +G IC L G++ T T ++ M M F PV+
Sbjct: 421 VSRLVRMHSNDMEEIEKVEAGGICALFGIE--CASGDTFTDGSVSYTMTSM-FVPEPVIS 477
Query: 373 IAVEPKNPADLPKLVEGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDLEEDH 549
++++PK+ D + L R + DP + ++ ES E I++G GELHLE+ ++ + ++
Sbjct: 478 LSLKPKSK-DTTSFSKALNRFQREDPTFRVQLDNESKETIISGMGELHLEVYVERMRREY 536
Query: 550 ACIPIKKSDPVVSYR 594
+ + P V++R
Sbjct: 537 K-VDCETGKPRVAFR 550
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 45.2 bits (102), Expect = 7e-06
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 9/178 (5%)
Frame = +1
Query: 31 PLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFQPGKKEDLYEKTIQRTIL 210
PL+ + K++ + +G + RV G + G F P K+ E+ I R
Sbjct: 337 PLLAKIFKVIHHASRG-ILTYVRVNEGTLSRGMMM------FNPRTKKS--ERAI-RLYN 386
Query: 211 MMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTIT----TFKNAHNMKVMKFSV----SPV 366
+ + ++ + +GNI + G+ QF TG I KN H SV PV
Sbjct: 387 VFADQTQEVDCISAGNIGVISGIKQF--HTGDIIINKENSKNFHEYLSGNQSVISIPEPV 444
Query: 367 VRIAVEPKNPADLPKLVEGLKRLAKSDPMVQCINE-ESGEHIVAGAGELHLEICLKDL 537
++EP + D P L+E L + + DP + + E+G+ ++ G G +HL++ + L
Sbjct: 445 CIASIEPYSLKDEPALLEALANMNREDPSFRYTQDLENGQLLIQGMGIMHLQVSYERL 502
>SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 673
Score = 33.5 bits (73), Expect = 0.024
Identities = 23/78 (29%), Positives = 34/78 (43%)
Frame = -2
Query: 342 NLHVMCVLEGSDGTSLDEELIDADQTANVTGGHILNGLHVTAHHEDGTLDGLLIQIFFLA 163
N+ + V+ SDG L A V GG N + D L GLL +++
Sbjct: 117 NVDLDKVVNSSDGPRLGIAFSGGGLRAMVNGGGAFNAFD-SRFESDSPLSGLLQSAMYIS 175
Query: 162 GLEVGAHDTGLLSGNDFT 109
GL G+ G ++ N+FT
Sbjct: 176 GLSGGSWLVGSVAINNFT 193
>SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 673
Score = 33.5 bits (73), Expect = 0.024
Identities = 23/78 (29%), Positives = 34/78 (43%)
Frame = -2
Query: 342 NLHVMCVLEGSDGTSLDEELIDADQTANVTGGHILNGLHVTAHHEDGTLDGLLIQIFFLA 163
N+ + V+ SDG L A V GG N + D L GLL +++
Sbjct: 117 NVDLDKVVNSSDGPRLGIAFSGGGLRAMVNGGGAFNAFD-SRFESDSPLSGLLQSAMYIS 175
Query: 162 GLEVGAHDTGLLSGNDFT 109
GL G+ G ++ N+FT
Sbjct: 176 GLSGGSWLVGSVAINNFT 193
>SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 624
Score = 32.3 bits (70), Expect = 0.055
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = -2
Query: 342 NLHVMCVLEGSDGTSLDEELIDADQTANVTGGHILNGLHVTAHHEDGTLDGLLIQIFFLA 163
++ V V+ SDG L A V GG +LN + + +L G+L ++A
Sbjct: 81 DVDVNSVINDSDGPRLGLAFSGGGLRAMVHGGGVLNAFD-SRNGNGSSLAGILQSAMYIA 139
Query: 162 GLEVGAHDTGLLSGNDF 112
GL G+ G ++ N+F
Sbjct: 140 GLSGGSWLVGSVAVNNF 156
>SPBC146.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 263
Score = 29.5 bits (63), Expect = 0.39
Identities = 24/114 (21%), Positives = 49/114 (42%), Gaps = 4/114 (3%)
Frame = -2
Query: 384 LNGYTHDGRHAKLHNLHVMCVLEGSDGTSLDEELIDADQTANVTGGHILNGLHVTAHHED 205
+NG +LHN+ C ++GSD S D+T + +G N L ++ H D
Sbjct: 1 MNGIRKKPATLQLHNIKTSCFIDGSDDQS--------DRTRSSSGDSTSNSLKLSHHISD 52
Query: 204 GTLDGLLIQIFFLAG---LEVGAHDTGLL-SGNDFTGEHAPERVETALVRCRYH 55
++ + ++ + H LL + ++ G+ +P + ++ R+H
Sbjct: 53 ELINAIYKELKSPVSPWDKNISQHSPWLLEAASNSIGDSSPLLSPISPLKLRFH 106
>SPAC22H12.02 |tfg3|taf14|transcription factor TFIIF complex subunit
Tfg3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 241
Score = 29.1 bits (62), Expect = 0.51
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
Frame = +1
Query: 394 PADLPKLVEGLKRLAKSD--PMVQCINEESGEHIVA----GAGELHLEI 522
P D+ KL EGL++L + D +VQ +NE + GE H+++
Sbjct: 172 PVDMDKLAEGLQKLQEDDLLQVVQMVNENKTPDMYVRNDIEGGEFHIDL 220
>SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 732
Score = 28.7 bits (61), Expect = 0.68
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = -2
Query: 396 GILGLN-GYTHD--GRHAKLHNLHVMCVLEGSDGTSLDEELIDADQTANVTGGHILNGLH 226
GIL N G+ HD H H+ H MC+ ++ ++ EE + N H
Sbjct: 467 GILAFNHGHNHDHGSHHHHSHSNHSMCLPNTTNDINIFEEFEEEKDNVEAQKMGYTNDDH 526
Query: 225 VTAH 214
V+ H
Sbjct: 527 VSQH 530
>SPAC21E11.06 |tif224||translation initiation factor eIF2B delta
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 28.3 bits (60), Expect = 0.89
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +1
Query: 271 VGVDQFLVKTGTITTFKNAHNMKV--MKFSVSPVVRIAV 381
+GVD F K G + +K+ N+K+ +K+ V+P I V
Sbjct: 404 MGVDDFEEKPGVLANWKSVKNLKLLSLKYDVTPPRLITV 442
>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1076
Score = 27.1 bits (57), Expect = 2.1
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 89 RSGACSPVKSLPDRRPVSWAPTSSPARKKICMRRPSSVPSS--*WAVTWRPL 238
RSG+ S P+ PV+ PT P + R + SS +++W+PL
Sbjct: 1024 RSGSSSSGVPAPNLTPVNVPPTPPPRKSSASQRSGDLLASSPEESSISWKPL 1075
>SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 793
Score = 26.6 bits (56), Expect = 2.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 280 DQFLVKTGTITTFKNAHNMKVMKFSVSPVV 369
D FLVK G + ++ +N+ FSVS +V
Sbjct: 82 DTFLVKYGDLINIQDPYNLNKTLFSVSDLV 111
>SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit
Bgs4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1955
Score = 26.6 bits (56), Expect = 2.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 170 FLPGWKLGPMIRAFCPVTTL 111
FL GW L + AFC VT +
Sbjct: 1738 FLDGWSLPKTVLAFCAVTAI 1757
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 26.2 bits (55), Expect = 3.6
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -2
Query: 249 GHILNGLHVTAHHEDGTLDGLLIQIFFLAGLEVGAHD 139
G+++NG V +HH+ L L+ Q A + VG +D
Sbjct: 573 GNVINGFIVRSHHDQLILKELMRQSNCHATVVVGKYD 609
>SPCC622.12c |||NADP-specific glutamate dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 451
Score = 26.2 bits (55), Expect = 3.6
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 145 GPNFQP-GKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVG 276
G +F P GK ++ + Q + + RY+ DVP+G+I G+ G
Sbjct: 115 GSDFDPKGKSDNEIRRFSQAFMRQLFRYIGPQTDVPAGDI-GVTG 158
>SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 26.2 bits (55), Expect = 3.6
Identities = 19/71 (26%), Positives = 31/71 (43%)
Frame = -2
Query: 324 VLEGSDGTSLDEELIDADQTANVTGGHILNGLHVTAHHEDGTLDGLLIQIFFLAGLEVGA 145
VL +DG L + A +TG +N + +L G+L +L GL G+
Sbjct: 116 VLNDTDGPRLGIAISGGGFPAMLTGAGAINAFDAR-NGNTTSLGGILQSSMYLTGLSGGS 174
Query: 144 HDTGLLSGNDF 112
G ++ N+F
Sbjct: 175 WLVGSVAVNNF 185
>SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|chr
2|||Manual
Length = 658
Score = 25.8 bits (54), Expect = 4.8
Identities = 7/21 (33%), Positives = 18/21 (85%)
Frame = +2
Query: 98 ACSPVKSLPDRRPVSWAPTSS 160
A +PV+++ ++ P++W+P+S+
Sbjct: 91 ALTPVRNMSNKPPLTWSPSSA 111
>SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 542
Score = 25.8 bits (54), Expect = 4.8
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +1
Query: 118 VTGQKARIMGPNFQPGKKEDLYEKTIQRTILMMGRYVE 231
V G + P+ +PG Y +T++R ++ YV+
Sbjct: 504 VLGSTEPVEPPSIEPGLPASAYSRTVERERFVLMAYVQ 541
>SPAC6F12.07 |tom20||mitochondrial TOM complex subunit
Tom20|Schizosaccharomyces pombe|chr 1|||Manual
Length = 152
Score = 25.4 bits (53), Expect = 6.3
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 157 QPGKKEDLYEKTIQRTILMMGRYVEAIEDVPS 252
QP + +YE+T+ I+ + R ++A E +PS
Sbjct: 119 QPVELFAIYERTVPEPIMNLLRAMQAKESIPS 150
>SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
3|||Manual
Length = 625
Score = 25.4 bits (53), Expect = 6.3
Identities = 22/83 (26%), Positives = 37/83 (44%)
Frame = -3
Query: 473 SSLMHCTIGSDLARRFRPSTSLGRSAGFLGSTAIRTTGDTLNFITFMLCAFLKVVMVPVL 294
S +H T+ S L + + P SL FLG TA + + ++ + + A L V
Sbjct: 469 SGALHVTVVSGLPQVYYPEASLTSFGNFLG-TATSYSSASASYPSTSMSASLSSVHTSSA 527
Query: 293 TRN*STPTRPQMLPEGTSSMAST 225
T + S + G+SS +S+
Sbjct: 528 TSS-SKSSSSSSSRSGSSSSSSS 549
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 25.0 bits (52), Expect = 8.3
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +1
Query: 223 YVEAIEDVPSGNIC--GLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRIAVE 384
Y+ A ++ SG G V + L T ++ A + + K + SP+VRI E
Sbjct: 414 YIAAFSEILSGRNYDFGEVSIQLMLSCTTCVSNMMEALPLCMAKIAYSPIVRILCE 469
>SPBC1711.12 |||serine peptidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 683
Score = 25.0 bits (52), Expect = 8.3
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +2
Query: 74 RAVSTRSGACSPVKSLPDRRPVSWAPTSSP 163
+++ST GACS + D ++W +P
Sbjct: 262 KSLSTAKGACSSPRLAKDGNHIAWLEMQTP 291
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,617,077
Number of Sequences: 5004
Number of extensions: 55291
Number of successful extensions: 201
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 258201856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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