Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_O13
(595 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0662 + 30987187-30987277,30987825-30990214 273 8e-74
04_01_0103 + 1082077-1082167,1083037-1085477 272 1e-73
02_04_0017 + 18937774-18937864,18938505-18940945 272 1e-73
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 266 1e-71
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 172 2e-43
03_05_0511 + 25056018-25059107 142 3e-34
02_04_0148 - 20198407-20201424 136 2e-32
05_05_0156 + 22792783-22793410,22797153-22797227,22797644-227988... 97 9e-21
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 68 5e-12
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 58 4e-09
02_05_0312 - 27792127-27792360,27793282-27793412,27793534-27793837 31 0.92
07_03_1042 + 23487326-23487443,23487555-23487957,23488057-234883... 30 1.2
02_05_0363 - 28297295-28298167 30 1.2
01_06_0930 + 33134385-33138257 30 1.2
04_03_0531 + 16817676-16818299 30 1.6
09_02_0302 - 7086017-7086124,7086125-7086796,7087511-7088070,708... 29 2.1
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 29 2.1
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 29 2.1
12_01_0121 - 920988-921296,921556-921620,921874-921923,922009-92... 29 2.8
05_06_0198 + 26300872-26301519,26302939-26303028,26303118-26303189 29 2.8
01_06_0665 - 31003333-31003680,31003773-31003854,31004068-310041... 29 2.8
08_02_1219 + 25363122-25363250,25363310-25363495,25363772-25363795 29 3.7
08_01_0515 - 4490855-4490902,4490992-4491072,4491752-4491823,449... 29 3.7
05_01_0431 + 3412178-3412336,3413012-3413109,3413185-3413312,341... 29 3.7
04_01_0410 - 5411135-5411581 29 3.7
02_05_0112 - 25931775-25932078,25932554-25932732,25934033-25935184 29 3.7
01_06_0929 + 33091184-33091510,33092503-33092646,33093054-33097001 29 3.7
01_07_0303 + 42615578-42615709,42616273-42616312,42616393-426164... 28 4.9
06_02_0334 + 14582925-14583404,14583533-14583540,14584070-145845... 28 6.5
06_02_0251 - 13478902-13478952,13478989-13479055,13479168-134793... 27 8.5
05_03_0498 - 14720989-14722119,14722225-14722839 27 8.5
03_05_0060 + 20363857-20365359 27 8.5
02_02_0340 + 9135846-9138377 27 8.5
02_01_0656 - 4870315-4870975,4872018-4872245,4872874-4872987,487... 27 8.5
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 273 bits (669), Expect = 8e-74
Identities = 131/198 (66%), Positives = 156/198 (78%), Gaps = 3/198 (1%)
Frame = +1
Query: 10 KTCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFQPGKKEDLYEK 189
+ CDPE PLM+YVSKM+P SDKGRFYAFGRVFSG+V TG K RIMGPN+ PG+K+DLY K
Sbjct: 364 RNCDPEGPLMLYVSKMIPASDKGRFYAFGRVFSGRVATGMKVRIMGPNYAPGQKKDLYVK 423
Query: 190 TIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFK--NAHNMKVMKFSVSP 363
+QRT++ MG+ E++E VP GN +VG+DQF+ K T+T K +A +K MKFSVSP
Sbjct: 424 NVQRTVIWMGKKQESVEGVPCGNTVAMVGLDQFITKNATLTNEKEVDACPIKAMKFSVSP 483
Query: 364 VVRIAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEE 543
VVR+AV+ K +DLPKLVEGLKRLAKSDPMV C EESGEHI+AGAGELHLEICLKDL+E
Sbjct: 484 VVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCTVEESGEHIIAGAGELHLEICLKDLQE 543
Query: 544 DH-ACIPIKKSDPVVSYR 594
D I S PVVS+R
Sbjct: 544 DFMGGAEITVSPPVVSFR 561
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 272 bits (668), Expect = 1e-73
Identities = 130/198 (65%), Positives = 157/198 (79%), Gaps = 3/198 (1%)
Frame = +1
Query: 10 KTCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFQPGKKEDLYEK 189
+ CDPE PLM+YVSKM+P SDKGRF+AFGRVFSG+V TG K RIMGPN+ PG+K+DLY K
Sbjct: 368 RNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGRVATGMKVRIMGPNYVPGQKKDLYVK 427
Query: 190 TIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFKNAH--NMKVMKFSVSP 363
++QRT++ MG+ E++EDVP GN +VG+DQF+ K T+T K A ++ MKFSVSP
Sbjct: 428 SVQRTVIWMGKKQESVEDVPCGNTVAMVGLDQFITKNATLTNEKEADACPIRAMKFSVSP 487
Query: 364 VVRIAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEE 543
VVR+AV+ K +DLPKLVEGLKRLAKSDPMV C EESGEHI+AGAGELHLEICLKDL+E
Sbjct: 488 VVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCTIEESGEHIIAGAGELHLEICLKDLQE 547
Query: 544 DH-ACIPIKKSDPVVSYR 594
D I S PVVS+R
Sbjct: 548 DFMGGAEIIVSPPVVSFR 565
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 272 bits (667), Expect = 1e-73
Identities = 130/198 (65%), Positives = 158/198 (79%), Gaps = 3/198 (1%)
Frame = +1
Query: 10 KTCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFQPGKKEDLYEK 189
+ CDPE PLM+YVSKM+P SDKGRF+AFGRVFSG+V TG K RIMGPN+ PG+K+DLY K
Sbjct: 368 RNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGRVATGMKVRIMGPNYVPGQKKDLYVK 427
Query: 190 TIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFK--NAHNMKVMKFSVSP 363
++QRT++ MG+ E++EDVP GN +VG+DQF+ K T+T K +A ++ MKFSVSP
Sbjct: 428 SVQRTVIWMGKKQESVEDVPCGNTVAMVGLDQFITKNATLTNEKESDACPIRAMKFSVSP 487
Query: 364 VVRIAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEE 543
VVR+AV+ K +DLPKLVEGLKRLAKSDPMV C EESGEHI+AGAGELHLEICLKDL+E
Sbjct: 488 VVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCTIEESGEHIIAGAGELHLEICLKDLQE 547
Query: 544 DH-ACIPIKKSDPVVSYR 594
D I S PVVS+R
Sbjct: 548 DFMGGAEIIVSPPVVSFR 565
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 266 bits (651), Expect = 1e-71
Identities = 123/198 (62%), Positives = 155/198 (78%), Gaps = 3/198 (1%)
Frame = +1
Query: 10 KTCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFQPGKKEDLYEK 189
+ CDP+ PLM+YVSKM+P SDKGRF+AFGRVFSG V TG K RIMGPNF PG+K+DLY K
Sbjct: 370 RNCDPKGPLMVYVSKMIPASDKGRFFAFGRVFSGTVATGNKVRIMGPNFVPGEKKDLYVK 429
Query: 190 TIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFK--NAHNMKVMKFSVSP 363
T+QRT++ MG+ E+++DVP GN +VG+DQF+ K T+T K +AH +K MKFSVSP
Sbjct: 430 TVQRTVIWMGKKQESVDDVPCGNTVAMVGLDQFITKNATLTDEKAVDAHPIKAMKFSVSP 489
Query: 364 VVRIAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEE 543
VVR +V KN ++LPKLVEGLKRLAKSDP+V C EESGEH++AG G+LHLEIC+KDL+E
Sbjct: 490 VVRKSVACKNASELPKLVEGLKRLAKSDPLVVCTIEESGEHVIAGVGQLHLEICIKDLQE 549
Query: 544 DH-ACIPIKKSDPVVSYR 594
D I P+++YR
Sbjct: 550 DFMGGAEIIVGPPIITYR 567
>06_03_0715 - 23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 172 bits (419), Expect = 2e-43
Identities = 83/197 (42%), Positives = 127/197 (64%), Gaps = 3/197 (1%)
Frame = +1
Query: 10 KTCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFQPGKKEDLYEK 189
K CDP APLM+ V+K+ P SD F AFGRV+SG + TGQ R++G + P +ED+ K
Sbjct: 490 KKCDPHAPLMVNVTKLYPKSDCSVFDAFGRVYSGTIQTGQTVRVLGEGYSPDDEEDMTVK 549
Query: 190 TIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFK---NAHNMKVMKFSVS 360
+ + + RY I P+G+ + GVD ++KT TI K + + + ++F+
Sbjct: 550 EVTKLWVYQARYRVPISKAPAGSWVLIEGVDASIMKTATICPMKMDEDVYIFRPLRFNTL 609
Query: 361 PVVRIAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLE 540
PVV+IA EP NP++LPK+VEGL++++KS P+ EESGEH + G GEL+L+ +KDL
Sbjct: 610 PVVKIAAEPLNPSELPKMVEGLRKISKSYPLAVTKVEESGEHTILGTGELYLDSIMKDLR 669
Query: 541 EDHACIPIKKSDPVVSY 591
E ++ + +K +DPVV++
Sbjct: 670 ELYSEVEVKVADPVVTF 686
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 142 bits (343), Expect = 3e-34
Identities = 70/175 (40%), Positives = 108/175 (61%), Gaps = 4/175 (2%)
Frame = +1
Query: 82 FYAFGRVFSGKVVTGQKARIMGPNFQPGKKEDLY----EKTIQRTILMMGRYVEAIEDVP 249
F AF RVF G + GQK ++ P + P K E + E +Q M+G+ + + V
Sbjct: 439 FMAFARVFCGVLRAGQKVFVLSPLYDPMKGEAMQKHVQEVELQYLYEMLGQGLRPVSSVC 498
Query: 250 SGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRIAVEPKNPADLPKLVEGLK 429
+GN+ + G+ ++K+ T+++ KN M F VSP++++A+EP NPADL LV+GLK
Sbjct: 499 AGNVVAIQGLGHHILKSATLSSTKNCWPFSSMMFQVSPMLKVAIEPSNPADLGALVKGLK 558
Query: 430 RLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYR 594
L ++DP V+ + GEH++A AGE+HLE C KDLEE A + + SDP+VS++
Sbjct: 559 LLNRADPFVEYTVSQRGEHVLAAAGEIHLERCKKDLEERFAKVKLVVSDPLVSFK 613
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 136 bits (328), Expect = 2e-32
Identities = 67/178 (37%), Positives = 108/178 (60%), Gaps = 7/178 (3%)
Frame = +1
Query: 82 FYAFGRVFSGKVVTGQKARIMGPNFQPGKKED-------LYEKTIQRTILMMGRYVEAIE 240
F AF RVFSG + G K ++ P + P + D L E +Q MMG +E +
Sbjct: 416 FLAFARVFSGVLRAGHKVFVLSPMYDPLRGGDDAMQQKHLQEVELQHLYQMMGPDLEIVS 475
Query: 241 DVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRIAVEPKNPADLPKLVE 420
V +G++ + G+ ++K T+++ KN M F VSP++++A+EP NP+DL LV+
Sbjct: 476 AVRAGDVLAIEGLGHHVLKNATLSSTKNCQPFSGMMFQVSPMLKVAIEPSNPSDLGALVK 535
Query: 421 GLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYR 594
GLK L ++DP ++ E GEH++A AGE+HLE C+K+L+E A + ++ S P+VS++
Sbjct: 536 GLKLLNQADPFIEYTVSERGEHVLAAAGEIHLEHCIKNLQERFARVQLEVSKPLVSFK 593
>05_05_0156 + 22792783-22793410,22797153-22797227,22797644-22798879,
22798947-22799155,22799240-22800209,22800395-22800465
Length = 1062
Score = 97.1 bits (231), Expect = 9e-21
Identities = 59/162 (36%), Positives = 93/162 (57%), Gaps = 8/162 (4%)
Frame = +1
Query: 10 KTCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFQPGKKEDLYEK 189
+ CD E PL++YVSKM KGR++A GRVFSGKV +G + + P++ G+++DLY K
Sbjct: 547 RNCDAEGPLVLYVSKMTLALGKGRYFALGRVFSGKVTSGMNVQFLSPSYGIGERKDLYIK 606
Query: 190 TIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTF------KNA--HNMKVM 345
I+ +++ +G E +E G+ C + + L T TT KN+ ++KVM
Sbjct: 607 CIKSSLIWIGDKRELVE----GSSCSSIPGHRDLFDKATYTTVNYQLIKKNSTLTSVKVM 662
Query: 346 KFSVSPVVRIAVEPKNPADLPKLVEGLKRLAKSDPMVQCINE 471
+P V + V+ K DLPK +E LK+LA + P+ +N+
Sbjct: 663 PMR-APAVTVRVDCKAYPDLPKFLEALKKLANT-PVKTRLND 702
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 68.1 bits (159), Expect = 5e-12
Identities = 54/170 (31%), Positives = 85/170 (50%), Gaps = 2/170 (1%)
Frame = +1
Query: 91 FGRVFSGKVVTGQKARIMGPNFQPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGL 270
F R++SGK+V G N KKE I R + M E I +G+I L
Sbjct: 378 FVRIYSGKLVAGSYVL----NANKDKKE-----RIGRLLEMHANSKEDITVAVAGDIVAL 428
Query: 271 VGVDQFLVKTG-TITTFKNAHNMKVMKFSVSPVVRIAVEPKNPADLPKLVEGLKRLAKSD 447
G+ + TG T++ ++ M+F PV+++A+EPK AD K+ GL +LA+ D
Sbjct: 429 AGLKDTI--TGETLSDPDKPVVLERMEFP-DPVIKVAIEPKTKADADKMATGLIKLAQED 485
Query: 448 PMVQ-CINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYR 594
P +EE+ + ++ G GELHL+I + L+ + + P V+YR
Sbjct: 486 PSFHFSRDEETNQTVIEGMGELHLDIIVDRLKREFR-VEANVGAPQVNYR 534
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 58.4 bits (135), Expect = 4e-09
Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 3/194 (1%)
Frame = +1
Query: 22 PEAPLMMYVSKMVPTSDKGRF--YAFGRVFSGKVVTGQKARIMGPNFQPGKKEDLYEKTI 195
P PL+ K+ ++GRF + R++ G + G N GKK +
Sbjct: 378 PAEPLVALAFKL----EEGRFGQLTYLRIYDGVIRKGDFIY----NVNTGKKIK-----V 424
Query: 196 QRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRI 375
R + M +E I++ +G I + GVD T T + M M PV+ +
Sbjct: 425 PRLVRMHSNEMEDIQEAHAGQIVAVFGVD--CASGDTFTDGSVKYTMTSMNVP-EPVMSL 481
Query: 376 AVEPKNPADLPKLVEGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDLEEDHA 552
AV P + + + L R K DP + ++ ESGE I++G GELHL+I ++ + ++
Sbjct: 482 AVSPISKDSGGQFSKALNRFQKEDPTFRVGLDPESGETIISGMGELHLDIYVERIRREYK 541
Query: 553 CIPIKKSDPVVSYR 594
+ K P V++R
Sbjct: 542 -VDAKVGKPRVNFR 554
>02_05_0312 - 27792127-27792360,27793282-27793412,27793534-27793837
Length = 222
Score = 30.7 bits (66), Expect = 0.92
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 104 SPVKSLPDRRPVSWAPTSSPARKKICMRRPSSVPSS 211
SPV + P R S P++SPAR + +RRPS++ ++
Sbjct: 11 SPVATAPTARARS-TPSASPARPSLRLRRPSTLAAA 45
>07_03_1042 +
23487326-23487443,23487555-23487957,23488057-23488397,
23488621-23489660
Length = 633
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/50 (28%), Positives = 20/50 (40%)
Frame = -3
Query: 512 CNSPAPATMCSPDSSLMHCTIGSDLARRFRPSTSLGRSAGFLGSTAIRTT 363
C P+P+ D S C GS + P+T+ AG S +T
Sbjct: 339 CFLPSPSEAIGTDGSSTSCGTGSSVTNAIAPATTTSTFAGLFASVTTSST 388
>02_05_0363 - 28297295-28298167
Length = 290
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 143 WAPTSSPARKKICMRRPSSVPSS*WAVTWRPL 238
W P+ SP R+ C RR +S S +AV PL
Sbjct: 206 WQPSPSPMRRTPCRRRQTSTMPSGFAVCLSPL 237
>01_06_0930 + 33134385-33138257
Length = 1290
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Frame = +1
Query: 160 PGKKEDL----YEKTIQRTILMMGRYVEAIEDVPSGNIC--GLVGVDQFLVKTGTITTFK 321
P + EDL Y+ T+ + L+ G Y E +E N C G + + + + T +
Sbjct: 777 PSQLEDLTIEGYKSTMYPSWLLDGSYFENLESFTLANCCVIGSLPPNTEIFRHCMTLTLE 836
Query: 322 NAHNMKVMKFSVSPVVRIAVE 384
N NMK + F + +++E
Sbjct: 837 NVPNMKTLPFLPEGLTSLSIE 857
>04_03_0531 + 16817676-16818299
Length = 207
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = -3
Query: 557 MQAWSSSRSLRQIS-RCNSPAPATMC 483
+Q WSS+ ++R S C PAPAT C
Sbjct: 177 LQQWSSTAAVRGTSIYCRPPAPATQC 202
>09_02_0302 -
7086017-7086124,7086125-7086796,7087511-7088070,
7088754-7089131,7089357-7089821,7090022-7090127,
7090219-7090294,7090407-7090648,7090824-7090904,
7091013-7091205,7091336-7091558,7091611-7091646,
7091694-7091790
Length = 1078
Score = 29.5 bits (63), Expect = 2.1
Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 10/112 (8%)
Frame = +1
Query: 238 EDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKV--MKFSVSPVVRIAVEPKNPADLPK 411
E +PS +C + +TT + + M+V + +VSP +I V+P P
Sbjct: 27 EQLPSQGVCVTLSCLTVGKSEVPLTTRFDGNAMQVDGLLKNVSPTTKIVVKPNEELKSPF 86
Query: 412 LVEGLKRLAKSDPMV--------QCINEESGEHIVAGAGELHLEICLKDLEE 543
LV+ L + DP++ + +E V +G L + + L D++E
Sbjct: 87 LVKRHLFLKRPDPIILDELYSLTTKVTDEESRQSVWVSGNLPINLKLVDIQE 138
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 19 DPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARI 141
D PL++ + ++ + G+F AFG++ +G + G K I
Sbjct: 475 DVSKPLILPICDVIKSQSTGQFAAFGKLETGAIRIGSKVLI 515
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 19 DPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARI 141
D PL++ + ++ + G+F AFG++ +G + G K I
Sbjct: 475 DVSKPLILPICDVIKSQSTGQFAAFGKLETGAIRIGSKVLI 515
>12_01_0121 -
920988-921296,921556-921620,921874-921923,922009-922106,
923832-923867,925351-925731,925839-926324,926471-926647
Length = 533
Score = 29.1 bits (62), Expect = 2.8
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +2
Query: 71 TRAVSTRSGACSPVKSLPDRRPVSWAPTSSPARKKI 178
T+ + C+P+KS+ + + W P SS +R+ +
Sbjct: 484 TKGTKSMDHPCNPIKSMGNLGSMGWPPLSSESRRML 519
>05_06_0198 + 26300872-26301519,26302939-26303028,26303118-26303189
Length = 269
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 62 RHRTRAVSTRSGACSPVKSLPDRRPVSWAPTS 157
RHR R V T S + S + P P W P S
Sbjct: 29 RHRRRRVQTLSSSSSDAAAAPSTPPPVWPPAS 60
>01_06_0665 -
31003333-31003680,31003773-31003854,31004068-31004198,
31004272-31004370,31004511-31004666,31004877-31004951,
31005554-31005736,31005833-31005983,31006732-31007027
Length = 506
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Frame = +1
Query: 4 RGKTCDPEAPLMMYVSKM--VPTSDK-GRFYA 90
RG DP APL M +S + +PT D+ G FYA
Sbjct: 76 RGLRADPHAPLKMLISYVDNLPTGDEHGLFYA 107
>08_02_1219 + 25363122-25363250,25363310-25363495,25363772-25363795
Length = 112
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 430 ASDLPPAWAGRRDSWAQRLY 371
ASD P A RRD++AQRLY
Sbjct: 23 ASDHPAALRSRRDAFAQRLY 42
>08_01_0515 -
4490855-4490902,4490992-4491072,4491752-4491823,
4492296-4492373,4493316-4493444,4493862-4493942,
4494064-4494205,4494672-4494865,4494962-4495027,
4495108-4495194,4495326-4495376
Length = 342
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = -3
Query: 590 YDTTGSDFLIGMQAWSSSRSLRQISRCNSPAPATMCSPDSSLMHCTIGSDLAR 432
+ T GSD S + L+ SRC P P + + D S+ + D +R
Sbjct: 255 FATAGSDGAFNFWDKDSKQRLKAFSRCPLPIPCSTFNSDGSIFAYAVCYDWSR 307
>05_01_0431 + 3412178-3412336,3413012-3413109,3413185-3413312,
3413770-3413881,3414309-3414489,3414714-3414896,
3415133-3415315,3416062-3416131,3416413-3416522,
3416604-3416908,3417079-3417175,3417622-3417765,
3418217-3418303,3418387-3418473,3418566-3418706,
3418805-3418930,3419166-3419264,3419690-3419757,
3420275-3420341,3420713-3420883,3420959-3421048,
3421831-3421911,3423397-3423470,3423784-3423855,
3423925-3424017,3424138-3424204
Length = 1030
Score = 28.7 bits (61), Expect = 3.7
Identities = 22/94 (23%), Positives = 39/94 (41%)
Frame = -2
Query: 492 DNVFARLFVDALHHRV*FGETLQTFHQLGQVGGILGLNGYTHDGRHAKLHNLHVMCVLEG 313
D FA F+ L H+ F L + +L L Y D +L+ ++
Sbjct: 779 DLPFATFFLSKLKHKYNFLNDLPSLDP-ELYRHLLSLKHYDGDISQLELY----FVIVNN 833
Query: 312 SDGTSLDEELIDADQTANVTGGHILNGLHVTAHH 211
G +EEL+ + VT +++ +H+ A+H
Sbjct: 834 EYGEQSEEELLPGGRDMRVTSENVITYIHLVANH 867
>04_01_0410 - 5411135-5411581
Length = 148
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +2
Query: 89 RSGACSPVKSLPDRRPVSWAPTSSPARKKICMRRPSS 199
R+ SP+ + +P P+S+ KK+C ++P +
Sbjct: 98 RTSVKSPIPAKKSEQPAQKKPSSAQKSKKVCRKKPKT 134
>02_05_0112 - 25931775-25932078,25932554-25932732,25934033-25935184
Length = 544
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 98 ACSPVKSLPDRRPVSWAPTSSP 163
A S + P RRP SWAP+ +P
Sbjct: 255 AASSAPAFPPRRPNSWAPSPAP 276
>01_06_0929 + 33091184-33091510,33092503-33092646,33093054-33097001
Length = 1472
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Frame = +1
Query: 160 PGKKEDL----YEKTIQRTILMMGRYVEAIEDVPSGNICGLVGV--DQFLVKTGTITTFK 321
P + EDL Y+ + + L+ G Y E +E N CG+ + + + + T +
Sbjct: 959 PSQLEDLTIEGYKSAMYPSWLLDGSYFENLESFTLANCCGIGSLPPNTEIFRHCLTLTLE 1018
Query: 322 NAHNMKVMKF 351
N NMK + F
Sbjct: 1019 NVPNMKTLSF 1028
>01_07_0303 +
42615578-42615709,42616273-42616312,42616393-42616477,
42616634-42616813,42618274-42618354,42618890-42619011,
42619867-42620723,42621656-42621897,42622107-42622200,
42622306-42622476,42622695-42622740,42624101-42624111,
42624141-42624392
Length = 770
Score = 28.3 bits (60), Expect = 4.9
Identities = 21/84 (25%), Positives = 33/84 (39%)
Frame = +1
Query: 250 SGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRIAVEPKNPADLPKLVEGLK 429
+G+ L G ++ TG T + N+ + K P +R +PKN + + GL
Sbjct: 271 TGSATILTGDQPVIIYTGADTEKRQVQNIVLPKNRSDPYLREWTKPKNNPLIEPVGPGLN 330
Query: 430 RLAKSDPMVQCINEESGEHIVAGA 501
DP I + I GA
Sbjct: 331 SNQFRDPTTGWIGPDGLWRIAVGA 354
>06_02_0334 +
14582925-14583404,14583533-14583540,14584070-14584561,
14584733-14585087,14585338-14585505
Length = 500
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 89 RSGACSPVKSLPDRRPVSWAPTSSPARKKI-CMRRPS 196
R+ SP+ + +P P+S+P KK+ CMRR S
Sbjct: 132 RTPVKSPIPAKKSEQPALKKPSSAPKSKKVNCMRRLS 168
>06_02_0251 -
13478902-13478952,13478989-13479055,13479168-13479379,
13480144-13481540,13481574-13482432,13482537-13482836
Length = 961
Score = 27.5 bits (58), Expect = 8.5
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +1
Query: 400 DLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICL-KDLEEDHACIPIKKSD 576
DLP+ E + + AK+ NEE E I+ +LH E+C KD + H + +
Sbjct: 684 DLPE--ESIHQSAKNSTENTSYNEEPEESIIKRKIKLHQEMCNDKDAQTKHKVEGVSEIG 741
Query: 577 P 579
P
Sbjct: 742 P 742
>05_03_0498 - 14720989-14722119,14722225-14722839
Length = 581
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -2
Query: 294 DEELIDADQTANVTGGHILNGLHVTAHHEDGTLDG 190
D L+DAD T N G ++N GT+DG
Sbjct: 504 DASLVDADGTVNEAGQRLVNLRREWTSDARGTIDG 538
>03_05_0060 + 20363857-20365359
Length = 500
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 267 TANVTGGHILNGLHVTAHHEDGTLDGLL 184
+AN TG ++G+H HH G ++G L
Sbjct: 240 SANQTGNSFVDGIHGENHHSIGEVNGNL 267
>02_02_0340 + 9135846-9138377
Length = 843
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -3
Query: 584 TTGSDFLIGMQAWSSSRSLRQISRCNSPAPATMCS 480
TTGSD L G+Q + R+L I+ P +CS
Sbjct: 801 TTGSDVLDGLQPHYNLRALGIINHGGPTGPGWLCS 835
>02_01_0656 -
4870315-4870975,4872018-4872245,4872874-4872987,
4873813-4873901
Length = 363
Score = 27.5 bits (58), Expect = 8.5
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 10/76 (13%)
Frame = -2
Query: 408 GQVGGILGLNGYTHDG-RHAKLHNLHVMCVL-------EGSDGTSLDEELIDADQTANVT 253
G GG+LGL G H G + AK HV + E D D L+ +D A
Sbjct: 181 GLRGGVLGLGGVGHMGVKVAKSMGHHVTVISSSARKRGEAMDDLGADAYLVSSDAAAMAA 240
Query: 252 GGHILNGL--HVTAHH 211
G L+ + V HH
Sbjct: 241 AGDSLDYIIDTVPVHH 256
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,794,516
Number of Sequences: 37544
Number of extensions: 436869
Number of successful extensions: 1552
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1544
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1411925004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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