Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_O10
         (501 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L18960-1|AAA19812.1|  144|Homo sapiens protein synthesis factor ...    34   0.24 
BT007201-1|AAP35865.1|  144|Homo sapiens eukaryotic translation ...    34   0.24 
BT007064-1|AAP35727.1|  144|Homo sapiens eukaryotic translation ...    34   0.24 
BC110421-1|AAI10422.1|  144|Homo sapiens EIF1AP1 protein protein.      34   0.24 
BC067851-1|AAH67851.1|  144|Homo sapiens eukaryotic translation ...    34   0.24 
BC005248-1|AAH05248.1|  144|Homo sapiens eukaryotic translation ...    34   0.24 
BC000793-1|AAH00793.1|  144|Homo sapiens eukaryotic translation ...    34   0.24 
AL732366-5|CAI40551.1|  116|Homo sapiens eukaryotic translation ...    34   0.24 
AL732366-4|CAI40550.1|  144|Homo sapiens eukaryotic translation ...    34   0.24 
AF000987-1|AAC51834.1|  144|Homo sapiens eIF-1A, Y isoform protein.    31   1.7  

>L18960-1|AAA19812.1|  144|Homo sapiens protein synthesis factor
           protein.
          Length = 144

 Score = 34.3 bits (75), Expect = 0.24
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = -3

Query: 496 YGEFPETVRINETVVYSVDGLDEDIEFGDEVSSEDE 389
           YGE PE  +INET  +   G D++I+F D++  +DE
Sbjct: 106 YGELPEHAKINETDTFG-PGDDDEIQF-DDIGDDDE 139


>BT007201-1|AAP35865.1|  144|Homo sapiens eukaryotic translation
           initiation factor 1A, Y chromosome protein.
          Length = 144

 Score = 34.3 bits (75), Expect = 0.24
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = -3

Query: 496 YGEFPETVRINETVVYSVDGLDEDIEFGDEVSSEDE 389
           YGE PE  +INET  +   G D++I+F D++  +DE
Sbjct: 106 YGELPEHAKINETDTFG-PGDDDEIQF-DDIGDDDE 139


>BT007064-1|AAP35727.1|  144|Homo sapiens eukaryotic translation
           initiation factor 1A protein.
          Length = 144

 Score = 34.3 bits (75), Expect = 0.24
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = -3

Query: 496 YGEFPETVRINETVVYSVDGLDEDIEFGDEVSSEDE 389
           YGE PE  +INET  +   G D++I+F D++  +DE
Sbjct: 106 YGELPEHAKINETDTFG-PGDDDEIQF-DDIGDDDE 139


>BC110421-1|AAI10422.1|  144|Homo sapiens EIF1AP1 protein protein.
          Length = 144

 Score = 34.3 bits (75), Expect = 0.24
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = -3

Query: 496 YGEFPETVRINETVVYSVDGLDEDIEFGDEVSSEDE 389
           YGE PE  +INET  +   G D++I+F D++  +DE
Sbjct: 106 YGELPEHAKINETDTFG-PGDDDEIQF-DDIGDDDE 139


>BC067851-1|AAH67851.1|  144|Homo sapiens eukaryotic translation
           initiation factor 1A, X-linked protein.
          Length = 144

 Score = 34.3 bits (75), Expect = 0.24
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = -3

Query: 496 YGEFPETVRINETVVYSVDGLDEDIEFGDEVSSEDE 389
           YGE PE  +INET  +   G D++I+F D++  +DE
Sbjct: 106 YGELPEHAKINETDTFG-PGDDDEIQF-DDIGDDDE 139


>BC005248-1|AAH05248.1|  144|Homo sapiens eukaryotic translation
           initiation factor 1A, Y-linked protein.
          Length = 144

 Score = 34.3 bits (75), Expect = 0.24
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = -3

Query: 496 YGEFPETVRINETVVYSVDGLDEDIEFGDEVSSEDE 389
           YGE PE  +INET  +   G D++I+F D++  +DE
Sbjct: 106 YGELPEHAKINETDTFG-PGDDDEIQF-DDIGDDDE 139


>BC000793-1|AAH00793.1|  144|Homo sapiens eukaryotic translation
           initiation factor 1A, X-linked protein.
          Length = 144

 Score = 34.3 bits (75), Expect = 0.24
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = -3

Query: 496 YGEFPETVRINETVVYSVDGLDEDIEFGDEVSSEDE 389
           YGE PE  +INET  +   G D++I+F D++  +DE
Sbjct: 106 YGELPEHAKINETDTFG-PGDDDEIQF-DDIGDDDE 139


>AL732366-5|CAI40551.1|  116|Homo sapiens eukaryotic translation
           initiation factor 1A, X-linked protein.
          Length = 116

 Score = 34.3 bits (75), Expect = 0.24
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = -3

Query: 496 YGEFPETVRINETVVYSVDGLDEDIEFGDEVSSEDE 389
           YGE PE  +INET  +   G D++I+F D++  +DE
Sbjct: 78  YGELPEHAKINETDTFG-PGDDDEIQF-DDIGDDDE 111


>AL732366-4|CAI40550.1|  144|Homo sapiens eukaryotic translation
           initiation factor 1A, X-linked protein.
          Length = 144

 Score = 34.3 bits (75), Expect = 0.24
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = -3

Query: 496 YGEFPETVRINETVVYSVDGLDEDIEFGDEVSSEDE 389
           YGE PE  +INET  +   G D++I+F D++  +DE
Sbjct: 106 YGELPEHAKINETDTFG-PGDDDEIQF-DDIGDDDE 139


>AF000987-1|AAC51834.1|  144|Homo sapiens eIF-1A, Y isoform protein.
          Length = 144

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = -3

Query: 496 YGEFPETVRINETVVYSVDGLDEDIEFGDEVSSEDE 389
           YG  PE  +INET  +   G D++I+F D++  +DE
Sbjct: 106 YGGLPEHAKINETDTFG-PGDDDEIQF-DDIGDDDE 139


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,934,345
Number of Sequences: 237096
Number of extensions: 767303
Number of successful extensions: 5145
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5145
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)