Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_O08
         (424 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   1.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   1.4  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   3.3  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   3.3  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   4.3  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   5.7  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   5.7  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    21   7.5  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    21   7.5  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    20   10.0 

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
 Frame = -3

Query: 194 VHCEVVSRLLQVHVEGLG----EVGRHEPSGSH 108
           +H EV   LL VH+ G      EV  H  +G H
Sbjct: 331 LHVEVTPPLLSVHLGGNAEFRCEVSTHPQAGPH 363


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
 Frame = -3

Query: 194 VHCEVVSRLLQVHVEGLG----EVGRHEPSGSH 108
           +H EV   LL VH+ G      EV  H  +G H
Sbjct: 331 LHVEVTPPLLSVHLGGNAEFRCEVSTHPQAGPH 363


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 311 KNKRHYEYG*HRYPHRFQRI 252
           KN++ YE G    P R+Q++
Sbjct: 313 KNQKFYERGIMMLPERWQKV 332


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -2

Query: 69  GTPGMRSPSPSPG 31
           G  G RS SPSPG
Sbjct: 106 GMGGYRSASPSPG 118


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +1

Query: 268 WGYRCYPY 291
           WGY  YPY
Sbjct: 213 WGYYAYPY 220


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -1

Query: 322 SNPIRTNVTMNMDSTDIPIDFNV 254
           ++P +T  T+ + + DIP  +NV
Sbjct: 244 NDPNKTEYTLKIYTHDIPETYNV 266


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -1

Query: 322 SNPIRTNVTMNMDSTDIPIDFNV 254
           ++P +T  T+ + + DIP  +NV
Sbjct: 244 NDPNKTEYTLKIYTHDIPETYNV 266


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -2

Query: 114 LAWQSSSRGWSSARCGTPGMR 52
           L W++    W++  C TP  R
Sbjct: 134 LPWRTCGNPWNTRYCLTPTER 154


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -2

Query: 114 LAWQSSSRGWSSARCGTPGMR 52
           L W++    W++  C TP  R
Sbjct: 187 LPWRTCGNPWNTRYCLTPTER 207


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 372 NLGGLMYWWG 401
           N+GGL + WG
Sbjct: 245 NIGGLNFQWG 254


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,830
Number of Sequences: 438
Number of extensions: 2115
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10873896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)