Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_O05
(509 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 42 5e-05
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 38 9e-04
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 34 0.014
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 30 0.23
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 29 0.40
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 27 1.2
SPBC11G11.02c |end3||actin cortical patch component End3 |Schizo... 27 2.2
SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces ... 27 2.2
SPBC1289.06c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 2.2
SPCC4E9.01c |rec11|SPCC550.16c|meiotic cohesin complex subunit R... 26 2.9
SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit |Sch... 26 3.8
SPBPB2B2.12c |||UDP-glucose 4-epimerase|Schizosaccharomyces pomb... 25 5.0
SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr 1|... 25 5.0
SPAC13C5.04 |||glutamine amidotransferase |Schizosaccharomyces p... 25 5.0
SPCC16C4.08c |skb15||Shk1 kinase binding protein 15|Schizosaccha... 25 5.0
SPAC823.03 |ppk15||serine/threonine protein kinase Ppk15 |Schizo... 25 5.0
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 25 8.7
SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|c... 25 8.7
SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inosito... 25 8.7
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 41.9 bits (94), Expect = 5e-05
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +2
Query: 335 YLFKAVDKDKSGYIAVKEF--KLFFECLGLHNDHAAVAFAAIDINGDGKLSFDEYVKL 502
Y+F D DK+GYI KEF L G ND AF D++ +G +S+DE +++
Sbjct: 67 YVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRI 124
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 37.9 bits (84), Expect = 9e-04
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +2
Query: 341 FKAVDKDKSGYIAVKEFKLFFECLG--LHNDHAAVAFAAIDINGDGKLSFDEYVKL 502
FK DKD +GYI V+E LG L + A D +GDG ++++E+ ++
Sbjct: 91 FKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVINYEEFSRV 146
Score = 25.8 bits (54), Expect = 3.8
Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +2
Query: 341 FKAVDKDKSGYIAVKEFKLFFECLGLHNDHAAV--AFAAIDINGDGKLSFDEYVKL 502
F D+D+ G I E + LG A + +D +G+G + F E++ +
Sbjct: 18 FSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDFTEFLTM 73
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 33.9 bits (74), Expect = 0.014
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +2
Query: 338 LFKAVDKDKSGYIAVKEFKLFFECLGLHNDHAAVAFAAIDINGDGKLSFDEY 493
LF VDK GY++ E FF L D A + D N +GKL+ E+
Sbjct: 266 LFSNVDKAHKGYVSGSEAYSFFLASKLPEDVLAQIWDLSDTNSNGKLNIGEF 317
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 29.9 bits (64), Expect = 0.23
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +2
Query: 341 FKAVDKDKSGYIAVKEFKLFFECLG--LHNDHAAVAFAAIDINGDGKLSFDEYVK 499
F+ DKD SGYI +F + + LG L ++ + D G + ++V+
Sbjct: 84 FRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLMVQEADPTNSGSFDYYDFVQ 138
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 29.1 bits (62), Expect = 0.40
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = +2
Query: 329 LPYLFKAVDKDKSGYIAVKEFKLFFECL---GLHNDHAAV----AFAAIDINGDGKLSFD 487
L + FK D D+ GYI+ E L + + L D +D + DGK+SF+
Sbjct: 95 LKFAFKIYDIDRDGYISNGELYLVLKMMVGTNLREDQLQQIVDKTIMEVDKDRDGKISFE 154
Query: 488 EY 493
E+
Sbjct: 155 EF 156
Score = 26.6 bits (56), Expect = 2.2
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = +2
Query: 338 LFKAVDKDKSGYIAVKEFKLFFECLGLH---NDHAAVAFAAIDINGDGKLSFDE 490
LF VD+D G + +EF +H + AF DI+ DG +S E
Sbjct: 61 LFSVVDEDGGGDVDFQEFINSLSVFSVHGNKEEKLKFAFKIYDIDRDGYISNGE 114
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 27.5 bits (58), Expect = 1.2
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +1
Query: 226 GAIDPYNFVTLEQYLDDM 279
GA+DPY ++T E+ DD+
Sbjct: 761 GALDPYTYLTTEEVSDDL 778
>SPBC11G11.02c |end3||actin cortical patch component End3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 375
Score = 26.6 bits (56), Expect = 2.2
Identities = 7/24 (29%), Positives = 17/24 (70%)
Frame = +1
Query: 61 KMRTVHNILDVDNDGLISFNDFVL 132
K+ + ++ D+D+DG+ F++F +
Sbjct: 41 KLEKIWDLADIDDDGMFDFDEFAI 64
>SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1888
Score = 26.6 bits (56), Expect = 2.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 70 TVHNILDVDNDGLISFNDFVLFAERFKSLGHLDEKQAKEFSDII 201
T ++ L ND I ++ + F+SLG LDE A +F+ ++
Sbjct: 1389 TFYSFLISYNDSFIKKHEEKVLTVWFESLGALDEDHAAQFTILL 1432
>SPBC1289.06c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 481
Score = 26.6 bits (56), Expect = 2.2
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +1
Query: 112 SFNDFVLF-AERFKSL---GHLDEKQAKEFSDIIKMTWEEQWGAIDPYNFVTLEQYLD 273
+ N ++LF +R K L G++DE + DI++ E Q A + + L+ Y+D
Sbjct: 93 TINRYILFLVDRIKMLNGRGNVDEATLDKLDDILRYAIEHQEIASARFWRIMLQSYID 150
>SPCC4E9.01c |rec11|SPCC550.16c|meiotic cohesin complex subunit
Rec11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 923
Score = 26.2 bits (55), Expect = 2.9
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = -1
Query: 203 LIISLNSFACFSSR--CPRDLN-LSAKRTKSLNEI 108
L+++LN F CF+ C RD+N + K ++ L EI
Sbjct: 729 LVLALNKFGCFAKEMVCLRDVNDWNIKLSEKLCEI 763
>SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 25.8 bits (54), Expect = 3.8
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = -3
Query: 258 ECYEVVGIDSAPLFLPRHLNNITEFLRLLLVEMPEGFEP---LSEKDEIIERDQPVIVYI 88
E + GI+S + L +L + T+ L E E + L+ + RDQP +YI
Sbjct: 879 EWQRMQGIESGDILL--YLGSRTQREEYLYGEDWEAYHSANLLTHIGQAFSRDQPYKIYI 936
Query: 87 QDVV 76
QDV+
Sbjct: 937 QDVM 940
>SPBPB2B2.12c |||UDP-glucose 4-epimerase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 25.4 bits (53), Expect = 5.0
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -1
Query: 161 CPRDLNLSAKRTK-SLNEISPSLSTSRMLWTVRILRRQNSERSNPLHSVSESP 6
CP D +TK ++ I L TS W ILR N ++P + E P
Sbjct: 149 CPNDPTNPYGKTKYAIENIIKDLHTSDNTWRGAILRYFNPIGAHPSGLLGEDP 201
>SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 25.4 bits (53), Expect = 5.0
Identities = 12/44 (27%), Positives = 19/44 (43%)
Frame = -1
Query: 161 CPRDLNLSAKRTKSLNEISPSLSTSRMLWTVRILRRQNSERSNP 30
C N ++ L E +P L ++M+W R + SNP
Sbjct: 214 CDNTANAKTHKSWELFENTPQLPAAKMMWYRRHYLPNEKDWSNP 257
>SPAC13C5.04 |||glutamine amidotransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 248
Score = 25.4 bits (53), Expect = 5.0
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 219 FLPRHLNNITEFLRLLLVEMPEGFEPLSEKDE 124
F R + NI + + + V++PEGFE L ++
Sbjct: 147 FFGRKVININQMHQDMAVDVPEGFELLGSTED 178
>SPCC16C4.08c |skb15||Shk1 kinase binding protein
15|Schizosaccharomyces pombe|chr 3|||Manual
Length = 341
Score = 25.4 bits (53), Expect = 5.0
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +1
Query: 82 ILDVDNDGLISFNDFVLFAERFKSLGHLDEKQAKEFSDIIKMTWEEQWGAIDPYN 246
+LD +DG I ++F +R KS+ +D+ SD W++ W + +N
Sbjct: 223 VLDT-SDGKI-LHEFTAHKKRVKSVYPVDDYLITASSDGSVCIWDKDWNLVIEHN 275
>SPAC823.03 |ppk15||serine/threonine protein kinase Ppk15
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 5.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 489 SSNDSLPSPLMSMAAKATAAWSLCKPK 409
S + S SPL +M K +S+C PK
Sbjct: 56 SPHGSYISPLEAMTVKLADTYSICNPK 82
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 24.6 bits (51), Expect = 8.7
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +3
Query: 213 GGTVGRYRSLQLRNTRTVFRRHASCTPMIKRSRRKRTDGYL 335
G G+Y + +++ F + S +K SR+ +GYL
Sbjct: 720 GQLYGKYEFEKEKSSNPAFAKFVSDVERLKESRKLELNGYL 760
>SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1142
Score = 24.6 bits (51), Expect = 8.7
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 223 WGAIDPYNFVTLEQYLDDMHHVLQ*SNVQEESAPMATLFVQG 348
+G YN+V ++ +DD H +L V ++S A+ FV G
Sbjct: 555 YGGDSFYNYVLPKEKMDDYHFIL----VSDDSKAPASGFVVG 592
>SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inositol
pyrophosphate synthase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 920
Score = 24.6 bits (51), Expect = 8.7
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -1
Query: 176 CFSSRCPRDLNLSAKRTKSLNEISPSLSTSRML 78
C++ +CP D+NL AK S +SP S +R L
Sbjct: 864 CYA-QCPLDMNLDAKHCIS---VSPRRSLTRHL 892
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,011,041
Number of Sequences: 5004
Number of extensions: 39758
Number of successful extensions: 137
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 137
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 204242806
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -