Samia BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_O01
         (690 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatas...    70   4e-13
SPCC31H12.05c |sds21||serine/threonine protein phosphatase Sds21...    67   3e-12
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch...    55   8e-09
SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatas...    35   0.010
SPAC823.15 |ppa1||minor serine/threonine protein phosphatase Ppa...    32   0.068
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch...    32   0.090
SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces ...    30   0.27 
SPAC1952.13 |ned1||lipin|Schizosaccharomyces pombe|chr 1|||Manual      28   1.5  
SPBC16H5.07c |ppa2||serine/threonine protein phosphatase Ppa2|Sc...    27   1.9  
SPBC26H8.05c |||serine/threonine protein phosphatase |Schizosacc...    26   4.5  
SPBC1198.03c |||sequence orphan|Schizosaccharomyces pombe|chr 2|...    26   5.9  
SPBP4H10.04 |ppb1||calcineurin catalytic subunit Ppb1|Schizosacc...    26   5.9  

>SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatase
           PP1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 327

 Score = 69.7 bits (163), Expect = 4e-13
 Identities = 30/36 (83%), Positives = 31/36 (86%)
 Frame = +2

Query: 2   HHRSEDAYEFFAKRQLVTLFSAPNYCGEFDNAGGMM 109
           H   ED YEFF+KRQLVTLFSAPNYCGEFDNAG MM
Sbjct: 247 HQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGAMM 282



 Score = 50.0 bits (114), Expect = 3e-07
 Identities = 22/37 (59%), Positives = 27/37 (72%)
 Frame = +3

Query: 111 SVDETLMCSFQILKPSEKKAKYQYNGINSGRPATPQR 221
           SVDE+L+CSFQILKP+EKK +Y Y G +     TP R
Sbjct: 283 SVDESLLCSFQILKPAEKKQRYGYQGSSQNWHMTPPR 319


>SPCC31H12.05c |sds21||serine/threonine protein phosphatase
           Sds21|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 322

 Score = 66.9 bits (156), Expect = 3e-12
 Identities = 28/36 (77%), Positives = 29/36 (80%)
 Frame = +2

Query: 2   HHRSEDAYEFFAKRQLVTLFSAPNYCGEFDNAGGMM 109
           H   ED YEFF KRQLVT+FSAPNYCGEFDN G MM
Sbjct: 244 HQVVEDGYEFFGKRQLVTIFSAPNYCGEFDNVGAMM 279



 Score = 40.3 bits (90), Expect = 3e-04
 Identities = 17/34 (50%), Positives = 24/34 (70%)
 Frame = +3

Query: 111 SVDETLMCSFQILKPSEKKAKYQYNGINSGRPAT 212
           SV+E L+CSFQILKP+EK+ +   + I   + AT
Sbjct: 280 SVNEDLLCSFQILKPAEKRQRVSQSSIKESKSAT 313


>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
           Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 515

 Score = 55.2 bits (127), Expect = 8e-09
 Identities = 24/36 (66%), Positives = 26/36 (72%)
 Frame = +2

Query: 2   HHRSEDAYEFFAKRQLVTLFSAPNYCGEFDNAGGMM 109
           H   ED YEFF  R L T+FSAPNYCGEFDN G +M
Sbjct: 432 HMVVEDGYEFFNDRTLCTVFSAPNYCGEFDNWGAVM 467



 Score = 26.2 bits (55), Expect = 4.5
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = +3

Query: 111 SVDETLMCSFQILKPSEKKA 170
           SV+  L+CSF+++KP ++ A
Sbjct: 468 SVNSELLCSFELIKPLDQAA 487


>SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatase
           Ppe1 |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 305

 Score = 35.1 bits (77), Expect = 0.010
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +2

Query: 2   HHRSEDAYEF-FAKRQLVTLFSAPNYCGEFDNAGGMM 109
           H   ++ Y++ FA + LVT++SAPNYC    N   +M
Sbjct: 235 HQLVQEGYKYHFADKNLVTVWSAPNYCYRCGNVASVM 271


>SPAC823.15 |ppa1||minor serine/threonine protein phosphatase
           Ppa1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 309

 Score = 32.3 bits (70), Expect = 0.068
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 2   HHRSEDAYEFFAKRQLVTLFSAPNYCGEFDNAGGMM 109
           H    + Y +     +VT+FSAPNYC    N   +M
Sbjct: 241 HQLVMEGYNWTTNHNVVTIFSAPNYCYRCGNQAAIM 276


>SPBC3F6.01c |||serine/threonine protein phosphatase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 473

 Score = 31.9 bits (69), Expect = 0.090
 Identities = 15/52 (28%), Positives = 24/52 (46%)
 Frame = +2

Query: 2   HHRSEDAYEFFAKRQLVTLFSAPNYCGEFDNAGGMMFGRRNTHVFLPDIKAV 157
           H   +  YE       +T+FSAPNYC    N G ++  + +  +     +AV
Sbjct: 404 HEVRDQGYEVEHDGYCITVFSAPNYCDSTGNLGAVIKVKEDMELDFHQFEAV 455


>SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 307

 Score = 30.3 bits (65), Expect = 0.27
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +2

Query: 2   HHRSEDAYEFFAKRQLVTLFSAPNYCGEFDNAGGMM 109
           H    + Y+   +++L T++SAPNYC    N   ++
Sbjct: 236 HQLCSEGYQILFEKKLSTVWSAPNYCYRCANLASIL 271


>SPAC1952.13 |ned1||lipin|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 656

 Score = 27.9 bits (59), Expect = 1.5
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 72  IIVVSSTMPVV*CSVDETLMCSFQILKPSEKKAKYQYNGINSG 200
           +IVV      + CS        F +L PS+KK ++  NG  +G
Sbjct: 29  VIVVEQEDKTLACSPFHVRFGKFSLLLPSDKKVEFSVNGQLTG 71


>SPBC16H5.07c |ppa2||serine/threonine protein phosphatase
           Ppa2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 322

 Score = 27.5 bits (58), Expect = 1.9
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +2

Query: 2   HHRSEDAYEFFAKRQLVTLFSAPNYCGEFDNAGGMM 109
           H    + + +     +VT+FSAPNYC    N   ++
Sbjct: 254 HQLVMEGFNWAHDGDVVTIFSAPNYCYRCGNQAAIL 289


>SPBC26H8.05c |||serine/threonine protein phosphatase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 348

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 38  KRQLVTLFSAPNYCGEFDNAGGMM 109
           K  +VT++SAPNYC    N   ++
Sbjct: 291 KGSVVTVWSAPNYCYRCGNVASIL 314


>SPBC1198.03c |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 249

 Score = 25.8 bits (54), Expect = 5.9
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 110 FGRRNTHVFLPDIKAV*EKGKVSVQRYQQ 196
           F  R THV+  +   V E+  VS++ YQQ
Sbjct: 184 FNPRKTHVYFINSDEVAEQRAVSIKAYQQ 212


>SPBP4H10.04 |ppb1||calcineurin catalytic subunit
           Ppb1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 554

 Score = 25.8 bits (54), Expect = 5.9
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +2

Query: 47  LVTLFSAPNYCGEFDNAGGMM 109
           L+T+FSAPNY   ++N   ++
Sbjct: 331 LMTIFSAPNYLDVYNNKAAVL 351


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,855,534
Number of Sequences: 5004
Number of extensions: 58890
Number of successful extensions: 151
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 319939482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)