Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_N22
(508 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0373 + 28374298-28374380,28375126-28375303,28375975-283760... 172 1e-43
01_06_0412 + 29159918-29160046,29160148-29160297,29160385-291604... 126 1e-29
05_06_0262 - 26746180-26746278,26746371-26746493,26746584-267467... 95 3e-21
07_03_1297 + 25587445-25587502,25587646-25587740,25588426-255886... 91 4e-19
05_04_0141 - 18364065-18364176,18364722-18364948,18365183-183653... 75 3e-14
03_06_0198 - 32299480-32299643,32300084-32300126,32300843-323009... 37 0.008
11_06_0697 + 26371193-26371397,26371562-26374254 32 0.30
11_06_0706 + 26460400-26462254,26462499-26462562,26462929-264629... 31 0.40
03_06_0413 + 33756151-33756475,33756837-33756945,33757004-337570... 30 0.93
02_05_0201 + 26687369-26689228 30 0.93
06_03_0996 + 26731442-26732121,26732573-26732772,26732930-26733330 30 1.2
01_05_0279 + 20318440-20318688,20318785-20318931,20319449-203196... 29 1.6
05_04_0189 - 18911654-18913207,18913310-18913528,18914034-189143... 29 2.1
10_06_0127 - 11027692-11027826,11027925-11027993,11029925-110300... 28 3.7
09_02_0392 + 8504856-8505041,8505099-8505143,8505836-8506404,850... 28 5.0
03_05_0504 - 24959851-24960285 28 5.0
02_05_1110 - 34182943-34182963,34183122-34183301,34184201-341845... 27 6.5
04_04_0733 + 27639581-27641257 27 8.7
02_01_0574 + 4247469-4248196,4249501-4249691,4250565-4251022 27 8.7
>02_05_0373 +
28374298-28374380,28375126-28375303,28375975-28376065,
28376162-28376256,28376379-28376468,28376789-28376837,
28376941-28377079,28377224-28377340,28377437-28377527,
28377604-28377746,28378009-28378123,28378439-28378483,
28378565-28378645
Length = 438
Score = 172 bits (419), Expect = 1e-43
Identities = 80/172 (46%), Positives = 119/172 (69%), Gaps = 6/172 (3%)
Frame = +2
Query: 11 RVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIARTSFFHIKRANIWLAAVTKQNVNAAM 190
R+YRDD+G N VDAFR++++ ++ PV I SF +++ +N+++ V N N A
Sbjct: 21 RLYRDDVGGNMVDAFRMHIMQTKELGTCPVRQIGGCSFLYMRISNVYIVIVVSSNANVAC 80
Query: 191 VFEFLLKIIDVMQSYF-GKISEENIKNNFVLIYELLDEILDFGYPQNSDTGVLKTFITQQ 367
F+F+++ + + +SYF G E+ I+NNFVLIYELLDEI+DFGYPQN +LK +ITQ+
Sbjct: 81 AFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDFGYPQNLSPEILKLYITQE 140
Query: 368 GIKS-----ASNEEQAQITSQVTGQI*WRREGIKYRRNELFLDVLEYVNLLM 508
G++S S++ T QVTG + WRREG+ Y++NE+FLD++E VNLLM
Sbjct: 141 GVRSPFSSKPSDKPVPNATLQVTGAVGWRREGLMYKKNEVFLDIVESVNLLM 192
>01_06_0412 +
29159918-29160046,29160148-29160297,29160385-29160447,
29160540-29160716,29160796-29160899,29162142-29162249,
29162336-29162432,29162540-29162637,29162718-29162859,
29162941-29163063,29163161-29163259
Length = 429
Score = 126 bits (304), Expect = 1e-29
Identities = 62/169 (36%), Positives = 103/169 (60%), Gaps = 3/169 (1%)
Frame = +2
Query: 11 RVYRDDIGRNAVDAFRVNVIHAR--QQVRSPVT-NIARTSFFHIKRANIWLAAVTKQNVN 181
R YR D+ + F ++ + SPV + A ++ I+ N++L ++QN N
Sbjct: 21 RDYRGDVSALQAERFFTKLLDKEGDSEAHSPVVYDDAGVTYMFIQHNNVFLLTASRQNCN 80
Query: 182 AAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGYPQNSDTGVLKTFIT 361
AA + FL +++DV + YF ++ EE++++NFV++YELLDE++DFGYPQ ++ +L FI
Sbjct: 81 AASILLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQYTEAKILSEFIK 140
Query: 362 QQGIKSASNEEQAQITSQVTGQI*WRREGIKYRRNELFLDVLEYVNLLM 508
+ E + VT + WR EGI+Y++NE+FLDV+E VN+L+
Sbjct: 141 TDAYRM---EVSQRPPMAVTNAVSWRSEGIRYKKNEVFLDVVESVNILV 186
>05_06_0262 -
26746180-26746278,26746371-26746493,26746584-26746725,
26746824-26746921,26747012-26747108,26747215-26747322,
26747900-26748003,26748170-26748268,26748373-26748435,
26748538-26748687,26748769-26748900
Length = 404
Score = 94.7 bits (225), Expect(2) = 3e-21
Identities = 45/119 (37%), Positives = 75/119 (63%), Gaps = 3/119 (2%)
Frame = +2
Query: 11 RVYRDDIGRNAVDAFRVNVIHARQ--QVRSPVTNI-ARTSFFHIKRANIWLAAVTKQNVN 181
R YR D+ + F ++ +V SPV + A S+ I+ N++L ++QN N
Sbjct: 22 RDYRGDVSALQAERFFTKLLDKESDAEVLSPVVHDDAGVSYMFIQHNNVFLLTASRQNCN 81
Query: 182 AAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGYPQNSDTGVLKTFI 358
AA + FL +++DV + YF ++ EE++++NFV++YELLDE++DFGYPQ ++ +L FI
Sbjct: 82 AASILLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQYTEAMILSEFI 140
Score = 24.2 bits (50), Expect(2) = 3e-21
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +2
Query: 461 RNELFLDVLEYVNLLM 508
R E+FLDV+E VN+L+
Sbjct: 146 RMEVFLDVVESVNILV 161
>07_03_1297 +
25587445-25587502,25587646-25587740,25588426-25588629,
25588843-25588959,25589084-25589212,25589591-25589717,
25590174-25590277,25590369-25590473,25590969-25591190,
25591869-25591967
Length = 419
Score = 91.5 bits (217), Expect = 4e-19
Identities = 42/124 (33%), Positives = 77/124 (62%), Gaps = 3/124 (2%)
Frame = +2
Query: 11 RVYRDDIGRNAVDAF--RVNVIHARQQVRSP-VTNIARTSFFHIKRANIWLAAVTKQNVN 181
R YR ++ + + + F +V + + +P V N+ ++ H+K A ++ T NV+
Sbjct: 18 RDYRGEVPKGSAEIFFRKVKFWNDDEAEEAPPVFNVDGVNYIHVKVAGLFFVVTTMVNVS 77
Query: 182 AAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGYPQNSDTGVLKTFIT 361
+++ E L +I V + Y G ++E++++ NF+L+YELLDE++DFGYPQ + T VLK++I
Sbjct: 78 PSLLLELLQRIARVTKDYLGVLNEDSLRKNFILVYELLDEVIDFGYPQTTSTEVLKSYIF 137
Query: 362 QQGI 373
+ I
Sbjct: 138 NEPI 141
>05_04_0141 -
18364065-18364176,18364722-18364948,18365183-18365390,
18365497-18365706,18366078-18366180,18366214-18366325,
18367061-18367204,18367835-18367936,18368081-18368186,
18368301-18368335
Length = 452
Score = 74.9 bits (176), Expect = 3e-14
Identities = 35/106 (33%), Positives = 63/106 (59%)
Frame = +2
Query: 173 NVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGYPQNSDTGVLKT 352
+VN F+FL ++ DV+ Y G ++E+ IK+NFVL+Y++LDE++D G+P ++ +LK
Sbjct: 91 SVNMICDFQFLSRVADVLTDYLGDLNEDIIKDNFVLVYQILDEMMDNGFPLTTEPNILKE 150
Query: 353 FITQQGIKSASNEEQAQITSQVTGQI*WRREGIKYRRNELFLDVLE 490
I I S + +T + WR +K NE++++++E
Sbjct: 151 MIAPPNIVS---KMLNVVTDAAASFVPWRTTVVKDASNEVYVNIVE 193
>03_06_0198 -
32299480-32299643,32300084-32300126,32300843-32300929,
32301063-32301098,32301187-32301295,32301408-32301499,
32302029-32302115,32303887-32304222
Length = 317
Score = 37.1 bits (82), Expect = 0.008
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = +2
Query: 140 ANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGY 319
A+++ N V E + ++V+ YFG + E ++ NF Y +LDEIL G
Sbjct: 174 ASLYFCMCIDAEDNELEVLEIIHHFVEVLDRYFGSVCELDLIFNFHKAYYILDEILIAGE 233
Query: 320 PQNSDTGVLKTFITQQ 367
Q S + I Q
Sbjct: 234 LQESSKKNVARLIAAQ 249
>11_06_0697 + 26371193-26371397,26371562-26374254
Length = 965
Score = 31.9 bits (69), Expect = 0.30
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 17/142 (11%)
Frame = -1
Query: 427 LPSHLR-CYLSLFLIGCRLYALLSDEGLENSGIRVLWVTK--VQD----LIEQFIDEYKV 269
LP HL+ C+L C +Y D + + + +W+ + ++D L+E+ DEY
Sbjct: 367 LPRHLKQCFLY-----CSVYP--EDANIYHDDLTRMWIAEGFIEDHGGQLLEETADEY-- 417
Query: 268 VFDVLFRYLAEVRLHYINYLQQELKNHGSIHILLCYRSKPDVCSLDMEEG---------- 119
++++ R L + Y Y K H + L CY S+ + C + E
Sbjct: 418 YYELIHRNLLQPDGLY--YDHSSCKMHDLLRQLACYLSREE-CFVGNPESLVGNTVSKLR 474
Query: 118 RTSDVRDRRTNLLPRMDDIDTK 53
R S V D+ +LP MD++ K
Sbjct: 475 RVSVVTDKNMVMLPSMDEVQYK 496
>11_06_0706 +
26460400-26462254,26462499-26462562,26462929-26462981,
26464400-26464401,26464528-26464598,26464938-26465020,
26465065-26465126
Length = 729
Score = 31.5 bits (68), Expect = 0.40
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 17/142 (11%)
Frame = -1
Query: 427 LPSHLR-CYLSLFLIGCRLYALLSDEGLENSGIRVLWVTK--VQD----LIEQFIDEYKV 269
LP HL+ C+L C +Y D + + +W+ + ++D L+E+ DEY
Sbjct: 416 LPHHLKQCFLY-----CSVYP--EDANIYRDDLTRMWIAEGFIEDHGGQLLEETADEY-- 466
Query: 268 VFDVLFRYLAEVRLHYINYLQQELKNHGSIHILLCYRSKPDVCSLDMEEG---------- 119
++++ R L + Y Y K H + L CY S+ + C + E
Sbjct: 467 YYELIHRNLLQPDGLY--YDHSSCKMHDLLRQLACYLSREE-CFVGNPESLVGNTVSKLR 523
Query: 118 RTSDVRDRRTNLLPRMDDIDTK 53
R S V D+ +LP MD++ K
Sbjct: 524 RVSVVTDKNMVMLPSMDEVQYK 545
>03_06_0413 +
33756151-33756475,33756837-33756945,33757004-33757058,
33757059-33757094,33757196-33757282,33757737-33757808
Length = 227
Score = 30.3 bits (65), Expect = 0.93
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 242 KISEENIKNNFVLIYELLDEILDFGYPQNSD-TGVLKTFITQQGIKSASNEEQAQI 406
++ E ++ NF Y +LDE+L G Q S+ VL+ TQ + A+ EE + +
Sbjct: 163 QVCELDLIFNFHKAYFILDEVLIAGELQESNKKAVLRLITTQDNLVEAAKEEASSL 218
>02_05_0201 + 26687369-26689228
Length = 619
Score = 30.3 bits (65), Expect = 0.93
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = -3
Query: 326 FVGNQSPGSHRAVHR*VQSCF*CSLQISCRSKTALHQ 216
F +Q+ G HRA H+ V+ CF L+ S R++T+ Q
Sbjct: 305 FTSHQALGGHRASHKKVKGCFAAKLE-SSRNETSQTQ 340
>06_03_0996 + 26731442-26732121,26732573-26732772,26732930-26733330
Length = 426
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = +1
Query: 58 CQCHPCAAASSFAGHEHRSYVLLPYQASKHLACCGNKAK--CECCHGF*VPVE 210
CQ C A S A H HR + + Y A + K + C+ C F V E
Sbjct: 181 CQAEGCKADLSGAKHYHRRHKVCEYHAKASVVAASGKQQRFCQQCSRFHVLTE 233
>01_05_0279 + 20318440-20318688,20318785-20318931,20319449-20319611,
20319770-20319887,20320607-20320676,20320774-20320854,
20320924-20320959,20321129-20321149,20321586-20321642,
20321716-20321827,20321905-20322178,20322454-20322556,
20323244-20323459,20324615-20324665,20325339-20327963
Length = 1440
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 274 KVVFDVLFRYLAEVRLHYINYLQQELKNHGSIHILLCYRSK 152
K+VFD+ +R YI YL +EL ++ +L Y SK
Sbjct: 1115 KIVFDLFNLRFLGLRKTYIEYLPKELSRLQNLEVLDAYDSK 1155
>05_04_0189 - 18911654-18913207,18913310-18913528,18914034-18914367,
18914425-18914592,18914633-18914724,18914814-18914848,
18915377-18915441,18915565-18915669,18916373-18916434,
18916732-18916860,18918050-18918184,18918336-18918457,
18918808-18918965,18919215-18919372,18919447-18919780,
18919853-18919978,18920213-18920443,18920520-18920692
Length = 1399
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = -1
Query: 199 LKNHGSIHILLCYRSKPDVCSL-DMEEGRTSDVRDRRTNLLP 77
L+ G + + C+RSKP CS+ D+E+ + +V + + ++LP
Sbjct: 914 LEEDGDMGVAFCFRSKPFSCSVADVEKAQPFEVGE-KIHVLP 954
>10_06_0127 -
11027692-11027826,11027925-11027993,11029925-11030011,
11030146-11030286
Length = 143
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/56 (19%), Positives = 30/56 (53%)
Frame = +2
Query: 140 ANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEIL 307
A+++ + N + EF+ +++ M +FG + E +I + ++ +L+E++
Sbjct: 64 ASLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMV 119
>09_02_0392 +
8504856-8505041,8505099-8505143,8505836-8506404,
8509267-8509585
Length = 372
Score = 27.9 bits (59), Expect = 5.0
Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Frame = -1
Query: 322 WVTKVQDLIEQFIDEYKVVFDVLFRYLAEVRLHYINYLQQELKNH----GSIHILLCYRS 155
WV + +D ++ VV + + +Y+++ +Q ++ H G + + S
Sbjct: 102 WVQQTKDFLDYAFSMPNVVVSGKIKCPCSLCRNYVSHRRQMVEMHLCREGFKENYMNW-S 160
Query: 154 KPDVCSLDMEEGRTSDVRDRRTNLLPRMDD--IDTKGVY 44
+ CS+ E+ T+ + + + L RMDD +D G Y
Sbjct: 161 EHGECSIGQEDQATTSAENEKFDELDRMDDMLVDIAGDY 199
>03_05_0504 - 24959851-24960285
Length = 144
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 57 VSMSSMRGSKFVRRSRTSLVRPSSISSEQTSG 152
+S++S+ S F+RR+ LVRP +SS G
Sbjct: 33 LSVASLSPSDFLRRASLLLVRPPRLSSSSRRG 64
>02_05_1110 -
34182943-34182963,34183122-34183301,34184201-34184546,
34184794-34184846
Length = 199
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +2
Query: 245 ISEENIKNNFVLIYELLDEILDFGYPQNSDTGVLKTFITQQGIKSASNEEQAQI 406
ISEEN+ N V I + E D Y +++ +G+ T + + N+ Q+
Sbjct: 141 ISEENVVNKIVEIQIIQQETKDKLYLKHNSSGICNTKSAYKEVVKRENQNTNQM 194
>04_04_0733 + 27639581-27641257
Length = 558
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 326 FVGNQSPGSHRAVHR*VQSCF*CSLQ 249
F +Q+ G HRA H+ V+ CF L+
Sbjct: 279 FSSHQALGGHRASHKKVKGCFAAKLE 304
>02_01_0574 + 4247469-4248196,4249501-4249691,4250565-4251022
Length = 458
Score = 27.1 bits (57), Expect = 8.7
Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Frame = +1
Query: 58 CQCHPCAAASSFAGHEHRSYVLLPYQASKHLACCGNKAK--CECCHGF*VPVE 210
CQ C A S A H HR + + + A K + C+ C F V E
Sbjct: 197 CQAEGCKADLSAAKHYHRRHKVCDFHAKAAAVLAAGKQQRFCQQCSRFHVLAE 249
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,410,879
Number of Sequences: 37544
Number of extensions: 269920
Number of successful extensions: 826
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 822
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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