Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_N22
(508 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF099001-8|AAP13778.1| 435|Caenorhabditis elegans Dumpy : short... 303 3e-83
AF099001-7|AAP13777.1| 441|Caenorhabditis elegans Dumpy : short... 295 1e-80
L26290-1|AAA27981.1| 441|Caenorhabditis elegans clathrin-associ... 293 6e-80
Z83115-4|CAB05557.3| 422|Caenorhabditis elegans Hypothetical pr... 148 3e-36
L26291-1|AAA72418.1| 422|Caenorhabditis elegans protein ( Caeno... 148 3e-36
AF003130-2|AAB54125.2| 426|Caenorhabditis elegans Adaptin, mu/m... 140 7e-34
U41023-4|AAA82343.2| 414|Caenorhabditis elegans Adaptin, mu/med... 86 2e-17
AF016440-4|AAB65902.1| 157|Caenorhabditis elegans Adaptin, smal... 42 2e-04
U21309-2|AAN73882.1| 515|Caenorhabditis elegans Hypothetical pr... 35 0.039
U53340-2|AAA96207.1| 142|Caenorhabditis elegans Ap-2 small chai... 33 0.16
Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical pr... 30 0.84
U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical pr... 28 4.5
U21309-6|AAT92086.1| 541|Caenorhabditis elegans Hypothetical pr... 28 4.5
U21309-5|AAT92085.1| 536|Caenorhabditis elegans Hypothetical pr... 28 4.5
U21309-4|AAN73883.1| 546|Caenorhabditis elegans Hypothetical pr... 28 4.5
AY314778-1|AAQ84885.1| 546|Caenorhabditis elegans calcitonin re... 28 4.5
AY314777-1|AAQ84884.1| 541|Caenorhabditis elegans calcitonin re... 28 4.5
AY314776-1|AAQ84883.1| 536|Caenorhabditis elegans calcitonin re... 28 4.5
Z70686-9|CAA94614.3| 915|Caenorhabditis elegans Hypothetical pr... 27 5.9
U41109-7|AAQ62450.1| 1045|Caenorhabditis elegans Guanylyl cyclas... 27 7.8
U41109-6|AAQ62451.1| 1111|Caenorhabditis elegans Guanylyl cyclas... 27 7.8
U12964-6|AAM29681.1| 329|Caenorhabditis elegans Hypothetical pr... 27 7.8
>AF099001-8|AAP13778.1| 435|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 23, isoform b protein.
Length = 435
Score = 303 bits (745), Expect = 3e-83
Identities = 138/167 (82%), Positives = 157/167 (94%)
Frame = +2
Query: 8 ARVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIARTSFFHIKRANIWLAAVTKQNVNAA 187
+R+YRDD+ RNAVDAFRVNVIHARQQVRSPVTN+ARTSFFH+KR N+W+ AVT+QNVNAA
Sbjct: 17 SRIYRDDVTRNAVDAFRVNVIHARQQVRSPVTNMARTSFFHVKRGNVWICAVTRQNVNAA 76
Query: 188 MVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGYPQNSDTGVLKTFITQQ 367
MVFEFL + D MQSYFGK++EEN+KNNFVLIYELLDEILDFGYPQN+D GVLKTFITQQ
Sbjct: 77 MVFEFLKRFADTMQSYFGKLNEENVKNNFVLIYELLDEILDFGYPQNTDPGVLKTFITQQ 136
Query: 368 GIKSASNEEQAQITSQVTGQI*WRREGIKYRRNELFLDVLEYVNLLM 508
G+++A+ EEQ+QITSQVTGQI WRREGIKYRRNELFLDV+EYVNLLM
Sbjct: 137 GVRTATKEEQSQITSQVTGQIGWRREGIKYRRNELFLDVIEYVNLLM 183
>AF099001-7|AAP13777.1| 441|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 23, isoform a protein.
Length = 441
Score = 295 bits (724), Expect = 1e-80
Identities = 138/173 (79%), Positives = 157/173 (90%), Gaps = 6/173 (3%)
Frame = +2
Query: 8 ARVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIARTSFFHIKRANIWLAAVTKQNVNAA 187
+R+YRDD+ RNAVDAFRVNVIHARQQVRSPVTN+ARTSFFH+KR N+W+ AVT+QNVNAA
Sbjct: 17 SRIYRDDVTRNAVDAFRVNVIHARQQVRSPVTNMARTSFFHVKRGNVWICAVTRQNVNAA 76
Query: 188 MVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGYPQNSDTGVLKTFITQQ 367
MVFEFL + D MQSYFGK++EEN+KNNFVLIYELLDEILDFGYPQN+D GVLKTFITQQ
Sbjct: 77 MVFEFLKRFADTMQSYFGKLNEENVKNNFVLIYELLDEILDFGYPQNTDPGVLKTFITQQ 136
Query: 368 GIKSA------SNEEQAQITSQVTGQI*WRREGIKYRRNELFLDVLEYVNLLM 508
G+++A + EEQ+QITSQVTGQI WRREGIKYRRNELFLDV+EYVNLLM
Sbjct: 137 GVRTADAPVPVTKEEQSQITSQVTGQIGWRREGIKYRRNELFLDVIEYVNLLM 189
>L26290-1|AAA27981.1| 441|Caenorhabditis elegans
clathrin-associated protein homologueprotein.
Length = 441
Score = 293 bits (718), Expect = 6e-80
Identities = 137/173 (79%), Positives = 156/173 (90%), Gaps = 6/173 (3%)
Frame = +2
Query: 8 ARVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIARTSFFHIKRANIWLAAVTKQNVNAA 187
+R+YRDD+ RNAVDAFRVNVIHARQQVRSPVTN+ARTSFFH+KR N+W+ AVT+QNVNAA
Sbjct: 17 SRIYRDDVTRNAVDAFRVNVIHARQQVRSPVTNMARTSFFHVKRGNVWICAVTRQNVNAA 76
Query: 188 MVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGYPQNSDTGVLKTFITQQ 367
MVF FL + D MQSYFGK++EEN+KNNFVLIYELLDEILDFGYPQN+D GVLKTFITQQ
Sbjct: 77 MVFAFLKRFADTMQSYFGKLNEENVKNNFVLIYELLDEILDFGYPQNTDPGVLKTFITQQ 136
Query: 368 GIKSA------SNEEQAQITSQVTGQI*WRREGIKYRRNELFLDVLEYVNLLM 508
G+++A + EEQ+QITSQVTGQI WRREGIKYRRNELFLDV+EYVNLLM
Sbjct: 137 GVRTADAPVPVTKEEQSQITSQVTGQIGWRREGIKYRRNELFLDVIEYVNLLM 189
>Z83115-4|CAB05557.3| 422|Caenorhabditis elegans Hypothetical
protein K11D2.3a protein.
Length = 422
Score = 148 bits (358), Expect = 3e-36
Identities = 72/168 (42%), Positives = 109/168 (64%), Gaps = 2/168 (1%)
Frame = +2
Query: 8 ARVYRDDIGRNAVDAFRVNVIHARQQVRS--PVTNIARTSFFHIKRANIWLAAVTKQNVN 181
+R YR DI A+D F ++++ +++ S PV T+F IK NI+L + + NVN
Sbjct: 18 SRNYRGDIDMTAIDKF-IHLLMEKEEEGSAAPVLTYQDTNFVFIKHTNIYLVSACRSNVN 76
Query: 182 AAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGYPQNSDTGVLKTFIT 361
M+ FL K ++V YF + EE++++NFV+IYELLDE++DFG+PQ +++ +L+ +IT
Sbjct: 77 VTMILSFLYKCVEVFSEYFKDVEEESVRDNFVVIYELLDEMMDFGFPQTTESRILQEYIT 136
Query: 362 QQGIKSASNEEQAQITSQVTGQI*WRREGIKYRRNELFLDVLEYVNLL 505
Q+G K S VT + WR EGIKYR+NE+FLDV+E VN+L
Sbjct: 137 QEGQKLISAPRPPM---AVTNAVSWRSEGIKYRKNEVFLDVIESVNML 181
>L26291-1|AAA72418.1| 422|Caenorhabditis elegans protein (
Caenorhabditis elegans(unc-101) mRNA, complete cds. ).
Length = 422
Score = 148 bits (358), Expect = 3e-36
Identities = 72/168 (42%), Positives = 109/168 (64%), Gaps = 2/168 (1%)
Frame = +2
Query: 8 ARVYRDDIGRNAVDAFRVNVIHARQQVRS--PVTNIARTSFFHIKRANIWLAAVTKQNVN 181
+R YR DI A+D F ++++ +++ S PV T+F IK NI+L + + NVN
Sbjct: 18 SRNYRGDIDMTAIDKF-IHLLMEKEEEGSAAPVLTYQDTNFVFIKHTNIYLVSACRSNVN 76
Query: 182 AAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGYPQNSDTGVLKTFIT 361
M+ FL K ++V YF + EE++++NFV+IYELLDE++DFG+PQ +++ +L+ +IT
Sbjct: 77 VTMILSFLYKCVEVFSEYFKDVEEESVRDNFVVIYELLDEMMDFGFPQTTESRILQEYIT 136
Query: 362 QQGIKSASNEEQAQITSQVTGQI*WRREGIKYRRNELFLDVLEYVNLL 505
Q+G K S VT + WR EGIKYR+NE+FLDV+E VN+L
Sbjct: 137 QEGQKLISAPRPPM---AVTNAVSWRSEGIKYRKNEVFLDVIESVNML 181
>AF003130-2|AAB54125.2| 426|Caenorhabditis elegans Adaptin,
mu/medium chain (clathrinassociated complex) protein 1
protein.
Length = 426
Score = 140 bits (338), Expect = 7e-34
Identities = 69/167 (41%), Positives = 105/167 (62%), Gaps = 1/167 (0%)
Frame = +2
Query: 8 ARVYRDDIGRNAVDAFRVNVIHARQQ-VRSPVTNIARTSFFHIKRANIWLAAVTKQNVNA 184
+R YR D+ + ++ F ++ + SPV S+ +IK N++L ++K+N N
Sbjct: 18 SRNYRGDVDMSCIEKFMPLLVEKEDEGSASPVLVHQGISYTYIKYMNVYLVTISKKNTNV 77
Query: 185 AMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGYPQNSDTGVLKTFITQ 364
+V L KI++V YF + EE +++NFV+IYEL DE+LDFGYPQ +++ +L+ FITQ
Sbjct: 78 ILVLSALYKIVEVFCEYFKTLEEEAVRDNFVIIYELFDEMLDFGYPQTTESKILQEFITQ 137
Query: 365 QGIKSASNEEQAQITSQVTGQI*WRREGIKYRRNELFLDVLEYVNLL 505
QG + E + VT + WR EGIKYR+NE+FLDV+E VN+L
Sbjct: 138 QG----NRLETVRPPMAVTNAVSWRSEGIKYRKNEVFLDVIESVNML 180
>U41023-4|AAA82343.2| 414|Caenorhabditis elegans Adaptin, mu/medium
chain (clathrinassociated complex) protein 3 protein.
Length = 414
Score = 85.8 bits (203), Expect = 2e-17
Identities = 44/145 (30%), Positives = 82/145 (56%), Gaps = 7/145 (4%)
Frame = +2
Query: 95 PVTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNF 274
P+ + ++ + N++L AV MV EFL ++I YF + S+ ++K N
Sbjct: 47 PIISTPHHYLINVYQNNLFLVAVITVETPPLMVIEFLHRVIQTFTQYFDEFSDSSMKENC 106
Query: 275 VLIYELLDEILDFGYPQNSDTGVLKTFITQQG-IKSASNEEQAQIT---SQVTGQ---I* 433
V+++ELLDE+LD G+P ++ +L+ I +++ +N+ + + TGQ I
Sbjct: 107 VMVFELLDEMLDNGFPLVTEMNILQDLIKPPNFLRNIANQVTGRTNLSETLPTGQLSNIP 166
Query: 434 WRREGIKYRRNELFLDVLEYVNLLM 508
WRR+G+KY NE + DV+E +++++
Sbjct: 167 WRRQGVKYTNNEAYFDVIEEIDVIV 191
>AF016440-4|AAB65902.1| 157|Caenorhabditis elegans Adaptin, small
chain (clathrinassociated complex) protein 1 protein.
Length = 157
Score = 42.3 bits (95), Expect = 2e-04
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +2
Query: 140 ANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFG- 316
A+++ +QN N + E + + ++++ YFG + E +I NF Y +LDE L G
Sbjct: 63 ASLYFCCAIEQNDNELITLEVIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLAGE 122
Query: 317 YPQNSDTGVLKTFITQQGIK 376
+ S VLK Q I+
Sbjct: 123 IQETSKKQVLKAIAAQDLIQ 142
>U21309-2|AAN73882.1| 515|Caenorhabditis elegans Hypothetical
protein C13B9.3 protein.
Length = 515
Score = 34.7 bits (76), Expect = 0.039
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +2
Query: 143 NIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENI-KNNFVLIYELLDEILDFGY 319
NI+L VT +N N E L + V+ Y E+ I ++F LI+ DE++ GY
Sbjct: 69 NIYLVLVTTKNSNILEDLETLRLFVRVIPEYCRSNEEKEILAHDFDLIF-AFDEVVTLGY 127
Query: 320 PQNSDTGVLKTF 355
++ + ++TF
Sbjct: 128 RESVNLAQIRTF 139
>U53340-2|AAA96207.1| 142|Caenorhabditis elegans Ap-2 small chain
(clathrin associatedcomplex) protein 2 protein.
Length = 142
Score = 32.7 bits (71), Expect = 0.16
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Frame = +2
Query: 59 VNVIHARQQVRSPV-TNIARTSFFHI---KRANIWLAAVTKQNVNAAMVFEFLLKIIDVM 226
+ +HA VR TN F I + A ++ N E + ++V+
Sbjct: 32 IEEVHACVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDITDNNLYYLEAIHNFVEVL 91
Query: 227 QSYFGKISEENIKNNFVLIYELLDEILDFG-YPQNSDTGVLKTFI 358
YF + E ++ NF +Y ++DE+ G + S T VLK +
Sbjct: 92 NEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLL 136
>Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical protein
C14C10.5 protein.
Length = 1908
Score = 30.3 bits (65), Expect = 0.84
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +2
Query: 11 RVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIARTSFF 127
R++RDDIG V++ N I R++ ++ + + FF
Sbjct: 1763 RIHRDDIGMILVNSLNDNQIEVRERATDALSTLLQAKFF 1801
>U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical
protein F47E1.4 protein.
Length = 728
Score = 27.9 bits (59), Expect = 4.5
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 430 YLPSHLRCYLSLFLIGCRLYALLSDEGL-ENSGIRVLWVTKVQDLIEQFIDEYKV 269
Y HLR ++ L +G R +LLSD + +N+G + V D IE + K+
Sbjct: 674 YDSDHLRIWMHLLYVGVRFISLLSDIYVWKNAGNLKIMDDPVADNIEALSNPDKI 728
>U21309-6|AAT92086.1| 541|Caenorhabditis elegans Hypothetical
protein C13B9.4c protein.
Length = 541
Score = 27.9 bits (59), Expect = 4.5
Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 8/107 (7%)
Frame = +2
Query: 98 VTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENI----- 262
+ N+ R + ++ +N A K++V AAM+ LL + ++MQ+ + +NI
Sbjct: 350 ICNVIRVLYSKVRESNNTSEAGLKKSVKAAMMLLPLLGVPNIMQTIPFAPTRDNIMVFAV 409
Query: 263 ---KNNFVLIYELLDEILDFGYPQNSDTGVLKTFITQQGIKSASNEE 394
+F +Y+ L + + VLKTF + + S E
Sbjct: 410 WTYTASFTYMYQGLMVASIYCFTNKEVNHVLKTFYARYRLLHKSQNE 456
>U21309-5|AAT92085.1| 536|Caenorhabditis elegans Hypothetical
protein C13B9.4b protein.
Length = 536
Score = 27.9 bits (59), Expect = 4.5
Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 8/107 (7%)
Frame = +2
Query: 98 VTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENI----- 262
+ N+ R + ++ +N A K++V AAM+ LL + ++MQ+ + +NI
Sbjct: 340 ICNVIRVLYSKVRESNNTSEAGLKKSVKAAMMLLPLLGVPNIMQTIPFAPTRDNIMVFAV 399
Query: 263 ---KNNFVLIYELLDEILDFGYPQNSDTGVLKTFITQQGIKSASNEE 394
+F +Y+ L + + VLKTF + + S E
Sbjct: 400 WTYTASFTYMYQGLMVASIYCFTNKEVNHVLKTFYARYRLLHKSQNE 446
>U21309-4|AAN73883.1| 546|Caenorhabditis elegans Hypothetical
protein C13B9.4a protein.
Length = 546
Score = 27.9 bits (59), Expect = 4.5
Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 8/107 (7%)
Frame = +2
Query: 98 VTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENI----- 262
+ N+ R + ++ +N A K++V AAM+ LL + ++MQ+ + +NI
Sbjct: 350 ICNVIRVLYSKVRESNNTSEAGLKKSVKAAMMLLPLLGVPNIMQTIPFAPTRDNIMVFAV 409
Query: 263 ---KNNFVLIYELLDEILDFGYPQNSDTGVLKTFITQQGIKSASNEE 394
+F +Y+ L + + VLKTF + + S E
Sbjct: 410 WTYTASFTYMYQGLMVASIYCFTNKEVNHVLKTFYARYRLLHKSQNE 456
>AY314778-1|AAQ84885.1| 546|Caenorhabditis elegans calcitonin
receptor-like proteinSEB-1C protein.
Length = 546
Score = 27.9 bits (59), Expect = 4.5
Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 8/107 (7%)
Frame = +2
Query: 98 VTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENI----- 262
+ N+ R + ++ +N A K++V AAM+ LL + ++MQ+ + +NI
Sbjct: 350 ICNVIRVLYSKVRESNNTSEAGLKKSVKAAMMLLPLLGVPNIMQTIPFAPTRDNIMVFAV 409
Query: 263 ---KNNFVLIYELLDEILDFGYPQNSDTGVLKTFITQQGIKSASNEE 394
+F +Y+ L + + VLKTF + + S E
Sbjct: 410 WTYTASFTYMYQGLMVASIYCFTNKEVNHVLKTFYARYRLLHKSQNE 456
>AY314777-1|AAQ84884.1| 541|Caenorhabditis elegans calcitonin
receptor-like proteinSEB-1B protein.
Length = 541
Score = 27.9 bits (59), Expect = 4.5
Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 8/107 (7%)
Frame = +2
Query: 98 VTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENI----- 262
+ N+ R + ++ +N A K++V AAM+ LL + ++MQ+ + +NI
Sbjct: 350 ICNVIRVLYSKVRESNNTSEAGLKKSVKAAMMLLPLLGVPNIMQTIPFAPTRDNIMVFAV 409
Query: 263 ---KNNFVLIYELLDEILDFGYPQNSDTGVLKTFITQQGIKSASNEE 394
+F +Y+ L + + VLKTF + + S E
Sbjct: 410 WTYTASFTYMYQGLMVASIYCFTNKEVNHVLKTFYARYRLLHKSQNE 456
>AY314776-1|AAQ84883.1| 536|Caenorhabditis elegans calcitonin
receptor-like proteinSEB-1A protein.
Length = 536
Score = 27.9 bits (59), Expect = 4.5
Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 8/107 (7%)
Frame = +2
Query: 98 VTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENI----- 262
+ N+ R + ++ +N A K++V AAM+ LL + ++MQ+ + +NI
Sbjct: 340 ICNVIRVLYSKVRESNNTSEAGLKKSVKAAMMLLPLLGVPNIMQTIPFAPTRDNIMVFAV 399
Query: 263 ---KNNFVLIYELLDEILDFGYPQNSDTGVLKTFITQQGIKSASNEE 394
+F +Y+ L + + VLKTF + + S E
Sbjct: 400 WTYTASFTYMYQGLMVASIYCFTNKEVNHVLKTFYARYRLLHKSQNE 446
>Z70686-9|CAA94614.3| 915|Caenorhabditis elegans Hypothetical
protein R10H10.7 protein.
Length = 915
Score = 27.5 bits (58), Expect = 5.9
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 143 NIWLAAVTKQNVNAAMVFEFLLKIIDVMQS 232
++++ A+ + + A V FLLKI DV++S
Sbjct: 113 HMYMDAIPRDSPGATKVLNFLLKIFDVLKS 142
>U41109-7|AAQ62450.1| 1045|Caenorhabditis elegans Guanylyl cyclase
protein 7, isoforma protein.
Length = 1045
Score = 27.1 bits (57), Expect = 7.8
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +2
Query: 47 DAFRVNVIHARQQVRSPVTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVM 226
+ RV IH R +P+T RTS A+I + + ++N+ + F F ++ D +
Sbjct: 33 NVIRVGFIHCRDFQSAPITVGYRTS---AAAASIAVDRLKRENLMSGWEFNFTIEFDDCV 89
Query: 227 QS 232
+S
Sbjct: 90 ES 91
>U41109-6|AAQ62451.1| 1111|Caenorhabditis elegans Guanylyl cyclase
protein 7, isoformb protein.
Length = 1111
Score = 27.1 bits (57), Expect = 7.8
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +2
Query: 47 DAFRVNVIHARQQVRSPVTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVM 226
+ RV IH R +P+T RTS A+I + + ++N+ + F F ++ D +
Sbjct: 33 NVIRVGFIHCRDFQSAPITVGYRTS---AAAASIAVDRLKRENLMSGWEFNFTIEFDDCV 89
Query: 227 QS 232
+S
Sbjct: 90 ES 91
>U12964-6|AAM29681.1| 329|Caenorhabditis elegans Hypothetical
protein F26F4.8 protein.
Length = 329
Score = 27.1 bits (57), Expect = 7.8
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +2
Query: 299 EILDFGYPQNSDTGVLKTFITQQGIKSASNEEQAQITSQVTGQI*WRREGIKYR 460
E+ + Y + D G+LK + SASN E S V ++ + KY+
Sbjct: 213 EVKEEIYEADEDDGILKQLQMAMSVSSASNSEMIAKLSDVIAELFPLNDNEKYQ 266
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,438,798
Number of Sequences: 27780
Number of extensions: 236004
Number of successful extensions: 800
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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