Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_N19
(505 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL137469-1|CAB70754.1| 820|Homo sapiens hypothetical protein pr... 31 3.0
EF560718-1|ABQ59028.1| 1205|Homo sapiens APAF1 protein protein. 29 7.0
BC150255-1|AAI50256.1| 1237|Homo sapiens apoptotic peptidase act... 29 7.0
AJ243048-1|CAB55588.1| 1248|Homo sapiens apoptotic protease acti... 29 7.0
AJ243011-1|CAB55587.1| 1205|Homo sapiens protease activating fac... 29 7.0
AJ243010-1|CAB55586.1| 1205|Homo sapiens apoptotic protease acti... 29 7.0
AJ243009-1|CAB55585.1| 1248|Homo sapiens apoptotic protease acti... 29 7.0
AJ243008-1|CAB55584.1| 1205|Homo sapiens apoptotic protease acti... 29 7.0
AJ243007-1|CAB55583.1| 1205|Homo sapiens apoptotic protease acti... 29 7.0
AJ243006-1|CAB55582.1| 1205|Homo sapiens apoptotic protease acti... 29 7.0
AJ243005-1|CAB55581.1| 1205|Homo sapiens apoptotic protease acti... 29 7.0
AJ243004-1|CAB55580.1| 1205|Homo sapiens apoptotic protease acti... 29 7.0
AJ243003-1|CAB55579.1| 1205|Homo sapiens apoptotic protease acti... 29 7.0
AF149794-1|AAD34016.1| 1248|Homo sapiens apoptotic protease acti... 29 7.0
AF134397-1|AAD38344.1| 1237|Homo sapiens apoptotic protease acti... 29 7.0
AF013263-1|AAC51678.1| 1194|Homo sapiens apoptotic protease acti... 29 7.0
AB007873-1|BAA24843.2| 1237|Homo sapiens KIAA0413 protein. 29 7.0
>AL137469-1|CAB70754.1| 820|Homo sapiens hypothetical protein
protein.
Length = 820
Score = 30.7 bits (66), Expect = 3.0
Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Frame = -2
Query: 492 PPXGEVSPARSVHFHTTITLGNGRS-MPPPIHPLVCQYGKVQS-CPTRHELR--PAGRA- 328
PP + SP R TL N +S P P + Q+ QS P E+R P GR
Sbjct: 303 PPGAKDSPVRRA---VKDTLSNPQSPQPSPYNSPKPQHKVTQSFLPPGWEMRIAPNGRPF 359
Query: 327 --QHTTIVVTWVSDRGDYPEHPNSQT 256
H T TW R +P H S+T
Sbjct: 360 FIDHNTKTTTWEDPRLKFPVHMRSKT 385
>EF560718-1|ABQ59028.1| 1205|Homo sapiens APAF1 protein protein.
Length = 1205
Score = 29.5 bits (63), Expect = 7.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 265 VWMFGVISPITDPRHHNGSVLCTA 336
+W F ++ P+ + R HNG V C+A
Sbjct: 1068 IWSFDLLLPLHELRGHNGCVRCSA 1091
>BC150255-1|AAI50256.1| 1237|Homo sapiens apoptotic peptidase
activating factor 1 protein.
Length = 1237
Score = 29.5 bits (63), Expect = 7.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 265 VWMFGVISPITDPRHHNGSVLCTA 336
+W F ++ P+ + R HNG V C+A
Sbjct: 1100 IWSFDLLLPLHELRGHNGCVRCSA 1123
>AJ243048-1|CAB55588.1| 1248|Homo sapiens apoptotic protease
activating factor 1 protein.
Length = 1248
Score = 29.5 bits (63), Expect = 7.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 265 VWMFGVISPITDPRHHNGSVLCTA 336
+W F ++ P+ + R HNG V C+A
Sbjct: 1111 IWSFDLLLPLHELRGHNGCVRCSA 1134
>AJ243011-1|CAB55587.1| 1205|Homo sapiens protease activating factor-1
protein.
Length = 1205
Score = 29.5 bits (63), Expect = 7.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 265 VWMFGVISPITDPRHHNGSVLCTA 336
+W F ++ P+ + R HNG V C+A
Sbjct: 1068 IWSFDLLLPLHELRGHNGCVRCSA 1091
>AJ243010-1|CAB55586.1| 1205|Homo sapiens apoptotic protease
activating factor 1 protein.
Length = 1205
Score = 29.5 bits (63), Expect = 7.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 265 VWMFGVISPITDPRHHNGSVLCTA 336
+W F ++ P+ + R HNG V C+A
Sbjct: 1068 IWSFDLLLPLHELRGHNGCVRCSA 1091
>AJ243009-1|CAB55585.1| 1248|Homo sapiens apoptotic protease
activating factor 1 protein.
Length = 1248
Score = 29.5 bits (63), Expect = 7.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 265 VWMFGVISPITDPRHHNGSVLCTA 336
+W F ++ P+ + R HNG V C+A
Sbjct: 1111 IWSFDLLLPLHELRGHNGCVRCSA 1134
>AJ243008-1|CAB55584.1| 1205|Homo sapiens apoptotic protease
activating factor 1 protein.
Length = 1205
Score = 29.5 bits (63), Expect = 7.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 265 VWMFGVISPITDPRHHNGSVLCTA 336
+W F ++ P+ + R HNG V C+A
Sbjct: 1068 IWSFDLLLPLHELRGHNGCVRCSA 1091
>AJ243007-1|CAB55583.1| 1205|Homo sapiens apoptotic protease
activating factor 1 protein.
Length = 1205
Score = 29.5 bits (63), Expect = 7.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 265 VWMFGVISPITDPRHHNGSVLCTA 336
+W F ++ P+ + R HNG V C+A
Sbjct: 1068 IWSFDLLLPLHELRGHNGCVRCSA 1091
>AJ243006-1|CAB55582.1| 1205|Homo sapiens apoptotic protease
activating factor 1 protein.
Length = 1205
Score = 29.5 bits (63), Expect = 7.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 265 VWMFGVISPITDPRHHNGSVLCTA 336
+W F ++ P+ + R HNG V C+A
Sbjct: 1068 IWSFDLLLPLHELRGHNGCVRCSA 1091
>AJ243005-1|CAB55581.1| 1205|Homo sapiens apoptotic protease
activating factor 1 protein.
Length = 1205
Score = 29.5 bits (63), Expect = 7.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 265 VWMFGVISPITDPRHHNGSVLCTA 336
+W F ++ P+ + R HNG V C+A
Sbjct: 1068 IWSFDLLLPLHELRGHNGCVRCSA 1091
>AJ243004-1|CAB55580.1| 1205|Homo sapiens apoptotic protease
activating factor 1 protein.
Length = 1205
Score = 29.5 bits (63), Expect = 7.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 265 VWMFGVISPITDPRHHNGSVLCTA 336
+W F ++ P+ + R HNG V C+A
Sbjct: 1068 IWSFDLLLPLHELRGHNGCVRCSA 1091
>AJ243003-1|CAB55579.1| 1205|Homo sapiens apoptotic protease
activating factor 1 protein.
Length = 1205
Score = 29.5 bits (63), Expect = 7.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 265 VWMFGVISPITDPRHHNGSVLCTA 336
+W F ++ P+ + R HNG V C+A
Sbjct: 1068 IWSFDLLLPLHELRGHNGCVRCSA 1091
>AF149794-1|AAD34016.1| 1248|Homo sapiens apoptotic protease
activating factor 1 protein.
Length = 1248
Score = 29.5 bits (63), Expect = 7.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 265 VWMFGVISPITDPRHHNGSVLCTA 336
+W F ++ P+ + R HNG V C+A
Sbjct: 1111 IWSFDLLLPLHELRGHNGCVRCSA 1134
>AF134397-1|AAD38344.1| 1237|Homo sapiens apoptotic protease
activating factor-1 long isoform APAF-1L protein.
Length = 1237
Score = 29.5 bits (63), Expect = 7.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 265 VWMFGVISPITDPRHHNGSVLCTA 336
+W F ++ P+ + R HNG V C+A
Sbjct: 1100 IWSFDLLLPLHELRGHNGCVRCSA 1123
>AF013263-1|AAC51678.1| 1194|Homo sapiens apoptotic protease
activating factor 1 protein.
Length = 1194
Score = 29.5 bits (63), Expect = 7.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 265 VWMFGVISPITDPRHHNGSVLCTA 336
+W F ++ P+ + R HNG V C+A
Sbjct: 1057 IWSFDLLLPLHELRGHNGCVRCSA 1080
>AB007873-1|BAA24843.2| 1237|Homo sapiens KIAA0413 protein.
Length = 1237
Score = 29.5 bits (63), Expect = 7.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 265 VWMFGVISPITDPRHHNGSVLCTA 336
+W F ++ P+ + R HNG V C+A
Sbjct: 1100 IWSFDLLLPLHELRGHNGCVRCSA 1123
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,596,906
Number of Sequences: 237096
Number of extensions: 1897174
Number of successful extensions: 5414
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5414
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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