Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_N19
         (505 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              24   1.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   1.8  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   1.8  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 71  IYSNHRSYFDAICHGGS 121
           IY+NH     A CH GS
Sbjct: 124 IYANHCELHRAACHSGS 140


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 428  MEGLCHRPFTPW 393
            MEG+ H PFTP+
Sbjct: 1150 MEGMPHLPFTPF 1161


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 432 GNGRSMPPPIHPLVCQYG 379
           GNG  + P IH  +C  G
Sbjct: 360 GNGNILSPSIHDNICSNG 377



 Score = 21.0 bits (42), Expect = 7.3
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +2

Query: 449 WKWTDLAGE 475
           WKW D+A E
Sbjct: 39  WKWNDIAKE 47


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,794
Number of Sequences: 438
Number of extensions: 3768
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)