Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_N16
(571 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC070192-1|AAH70192.1| 145|Homo sapiens ribosomal protein L26-l... 140 4e-33
BC017360-1|AAH17360.1| 145|Homo sapiens ribosomal protein L26-l... 140 4e-33
X69392-1|CAA49189.1| 145|Homo sapiens ribosomal protein L26 pro... 139 5e-33
CR456828-1|CAG33109.1| 145|Homo sapiens RPL26 protein. 139 5e-33
BC071664-1|AAH71664.1| 145|Homo sapiens RPL26 protein protein. 139 5e-33
AB061829-1|BAB79467.1| 145|Homo sapiens ribosomal protein L26 p... 139 5e-33
L07287-1|AAA60279.1| 145|Homo sapiens ribosomal protein L26 pro... 137 3e-32
EF107718-1|ABK96970.1| 367|Homo sapiens G protein-coupled recep... 29 8.7
>BC070192-1|AAH70192.1| 145|Homo sapiens ribosomal protein L26-like
1 protein.
Length = 145
Score = 140 bits (338), Expect = 4e-33
Identities = 78/143 (54%), Positives = 99/143 (69%), Gaps = 1/143 (0%)
Frame = +3
Query: 45 MKYNKLVTSSK*KTG-RGISVPLLTSDEYLCQHHSPKS**QKFNVKSMPIRKDDEVQVVR 221
MK+N VTS + K R + P + + S K QK+NV+SMPIRKDDEVQVVR
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPLS-KELRQKYNVRSMPIRKDDEVQVVR 59
Query: 222 GHYKGQQVGNHGPLRTGLYPCKKFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKD 401
GHYKGQQ+G +Y KK+V+YIER+QREKANG +V+VGIHPSK VI +LK++KD
Sbjct: 60 GHYKGQQIGKV----VQVYR-KKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKD 114
Query: 402 RKTILDRRASGRLAALGKDNGKY 470
RK IL+R+A R +GK+ GKY
Sbjct: 115 RKKILERKAKSR--QVGKEKGKY 135
>BC017360-1|AAH17360.1| 145|Homo sapiens ribosomal protein L26-like
1 protein.
Length = 145
Score = 140 bits (338), Expect = 4e-33
Identities = 78/143 (54%), Positives = 99/143 (69%), Gaps = 1/143 (0%)
Frame = +3
Query: 45 MKYNKLVTSSK*KTG-RGISVPLLTSDEYLCQHHSPKS**QKFNVKSMPIRKDDEVQVVR 221
MK+N VTS + K R + P + + S K QK+NV+SMPIRKDDEVQVVR
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPLS-KELRQKYNVRSMPIRKDDEVQVVR 59
Query: 222 GHYKGQQVGNHGPLRTGLYPCKKFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKD 401
GHYKGQQ+G +Y KK+V+YIER+QREKANG +V+VGIHPSK VI +LK++KD
Sbjct: 60 GHYKGQQIGKV----VQVYR-KKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKD 114
Query: 402 RKTILDRRASGRLAALGKDNGKY 470
RK IL+R+A R +GK+ GKY
Sbjct: 115 RKKILERKAKSR--QVGKEKGKY 135
>X69392-1|CAA49189.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 139 bits (337), Expect = 5e-33
Identities = 78/143 (54%), Positives = 99/143 (69%), Gaps = 1/143 (0%)
Frame = +3
Query: 45 MKYNKLVTSSK*KTG-RGISVPLLTSDEYLCQHHSPKS**QKFNVKSMPIRKDDEVQVVR 221
MK+N VTS + K R + P + + S K QK+NV+SMPIRKDDEVQVVR
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLS-KELRQKYNVRSMPIRKDDEVQVVR 59
Query: 222 GHYKGQQVGNHGPLRTGLYPCKKFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKD 401
GHYKGQQ+G +Y KK+V+YIER+QREKANG +V+VGIHPSK VI +LK++KD
Sbjct: 60 GHYKGQQIGKV----VQVYR-KKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKD 114
Query: 402 RKTILDRRASGRLAALGKDNGKY 470
RK IL+R+A R +GK+ GKY
Sbjct: 115 RKKILERKAKSR--QVGKEKGKY 135
>CR456828-1|CAG33109.1| 145|Homo sapiens RPL26 protein.
Length = 145
Score = 139 bits (337), Expect = 5e-33
Identities = 78/143 (54%), Positives = 99/143 (69%), Gaps = 1/143 (0%)
Frame = +3
Query: 45 MKYNKLVTSSK*KTG-RGISVPLLTSDEYLCQHHSPKS**QKFNVKSMPIRKDDEVQVVR 221
MK+N VTS + K R + P + + S K QK+NV+SMPIRKDDEVQVVR
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLS-KELRQKYNVRSMPIRKDDEVQVVR 59
Query: 222 GHYKGQQVGNHGPLRTGLYPCKKFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKD 401
GHYKGQQ+G +Y KK+V+YIER+QREKANG +V+VGIHPSK VI +LK++KD
Sbjct: 60 GHYKGQQIGKV----VQVYR-KKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKD 114
Query: 402 RKTILDRRASGRLAALGKDNGKY 470
RK IL+R+A R +GK+ GKY
Sbjct: 115 RKKILERKAKSR--QVGKEKGKY 135
>BC071664-1|AAH71664.1| 145|Homo sapiens RPL26 protein protein.
Length = 145
Score = 139 bits (337), Expect = 5e-33
Identities = 78/143 (54%), Positives = 99/143 (69%), Gaps = 1/143 (0%)
Frame = +3
Query: 45 MKYNKLVTSSK*KTG-RGISVPLLTSDEYLCQHHSPKS**QKFNVKSMPIRKDDEVQVVR 221
MK+N VTS + K R + P + + S K QK+NV+SMPIRKDDEVQVVR
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLS-KELRQKYNVRSMPIRKDDEVQVVR 59
Query: 222 GHYKGQQVGNHGPLRTGLYPCKKFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKD 401
GHYKGQQ+G +Y KK+V+YIER+QREKANG +V+VGIHPSK VI +LK++KD
Sbjct: 60 GHYKGQQIGKV----VQVYR-KKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKD 114
Query: 402 RKTILDRRASGRLAALGKDNGKY 470
RK IL+R+A R +GK+ GKY
Sbjct: 115 RKKILERKAKSR--QVGKEKGKY 135
>AB061829-1|BAB79467.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 139 bits (337), Expect = 5e-33
Identities = 78/143 (54%), Positives = 99/143 (69%), Gaps = 1/143 (0%)
Frame = +3
Query: 45 MKYNKLVTSSK*KTG-RGISVPLLTSDEYLCQHHSPKS**QKFNVKSMPIRKDDEVQVVR 221
MK+N VTS + K R + P + + S K QK+NV+SMPIRKDDEVQVVR
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLS-KELRQKYNVRSMPIRKDDEVQVVR 59
Query: 222 GHYKGQQVGNHGPLRTGLYPCKKFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKD 401
GHYKGQQ+G +Y KK+V+YIER+QREKANG +V+VGIHPSK VI +LK++KD
Sbjct: 60 GHYKGQQIGKV----VQVYR-KKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKD 114
Query: 402 RKTILDRRASGRLAALGKDNGKY 470
RK IL+R+A R +GK+ GKY
Sbjct: 115 RKKILERKAKSR--QVGKEKGKY 135
>L07287-1|AAA60279.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 137 bits (331), Expect = 3e-32
Identities = 77/143 (53%), Positives = 98/143 (68%), Gaps = 1/143 (0%)
Frame = +3
Query: 45 MKYNKLVTSSK*KTG-RGISVPLLTSDEYLCQHHSPKS**QKFNVKSMPIRKDDEVQVVR 221
MK+N VTS + K R + P + + S K QK+NV+SMPIRKDDEVQVVR
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLS-KELRQKYNVRSMPIRKDDEVQVVR 59
Query: 222 GHYKGQQVGNHGPLRTGLYPCKKFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKD 401
GHYKGQQ+G +Y KK+V+YIER+QREKANG +V+VGIHPSK VI +LK++KD
Sbjct: 60 GHYKGQQIGKV----VQVYR-KKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKD 114
Query: 402 RKTILDRRASGRLAALGKDNGKY 470
RK IL+R+A R +GK+ KY
Sbjct: 115 RKKILERKAKSR--QVGKEKSKY 135
>EF107718-1|ABK96970.1| 367|Homo sapiens G protein-coupled receptor
144 splice variant protein.
Length = 367
Score = 29.5 bits (63), Expect = 8.7
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 300 RLQTSYRGTALYVKA-RGCPPAGLYNVLVQPALRRLC 193
R Q YRG + + RGCP GL+ +L+QP +LC
Sbjct: 326 RAQPIYRGCLGHHRLLRGCPVPGLHRLLLQPQ-HQLC 361
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,928,135
Number of Sequences: 237096
Number of extensions: 1814131
Number of successful extensions: 3488
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3474
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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