Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_N14
(586 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 36 0.006
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 31 0.094
SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pomb... 30 0.29
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 29 0.38
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.38
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 29 0.66
SPAC589.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 0.87
SPBC18H10.04c |sce3|tif48|translation initiation factor eIF4B|Sc... 28 0.87
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 27 1.5
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 27 1.5
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 27 2.7
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 26 3.5
SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 3.5
SPBC19G7.18c ||SPBC19G7.11c|sequence orphan|Schizosaccharomyces ... 26 3.5
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 4.7
SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac... 26 4.7
SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces... 26 4.7
SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyc... 25 6.2
SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyc... 25 8.1
SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 8.1
SPBC3B9.19 |mge1||GrpE domain chaperone protein|Schizosaccharomy... 25 8.1
SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase Ubp7|Schizosa... 25 8.1
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 25 8.1
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 35.5 bits (78), Expect = 0.006
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +1
Query: 373 LKDAEV--DMTDEEKEYRRSVAEEFKLTGNDAFLVADYELSIEKYTEGLRKCP 525
LKDAE ++ D E AEE ++ GN+ F D+ +I++YTE ++ P
Sbjct: 378 LKDAEKSKELQDREAYIDPDKAEESRVKGNELFKSGDFANAIKEYTEMTKRAP 430
Score = 29.5 bits (63), Expect = 0.38
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 427 VAEEFKLTGNDAFLVADYELSIEKYTEGL 513
+AEE K GN AF DY+ +I+ +T+ +
Sbjct: 1 MAEELKAKGNAAFSKKDYKTAIDYFTQAI 29
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 31.5 bits (68), Expect = 0.094
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 400 DEEKEYRRSVAEEFKLTGNDAFLVADYELSIEKYTEGLRKCP 525
D + AE+ KL GN+A DY+ +++ YT+ + P
Sbjct: 73 DSTAHVNKEEAEKLKLEGNNAIAAKDYQKALDLYTKAIEIDP 114
>SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 29.9 bits (64), Expect = 0.29
Identities = 12/30 (40%), Positives = 23/30 (76%)
Frame = +1
Query: 91 MSERLKNSAQTSNEDIIDDLTKDLKSSLGT 180
+S+ ++ S Q++NED+I ++ K +KS+L T
Sbjct: 156 LSKCIETSIQSTNEDLIKEIWKCIKSNLNT 185
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 29.5 bits (63), Expect = 0.38
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +1
Query: 418 RRSVAEEFKLTGNDAFLVADYELSIEKYTEGLRKCPLQFTQQPINTILVTGV 573
+R V+E KL+GN L ++ + + ++ LRKC L+ P+ +T +
Sbjct: 904 KRLVSELTKLSGNITLLESEIDRYVSEWHAILRKCKLEDIDVPLREGSLTSI 955
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 29.5 bits (63), Expect = 0.38
Identities = 18/68 (26%), Positives = 27/68 (39%)
Frame = +1
Query: 85 TTMSERLKNSAQTSNEDIIDDLTKDLKSSLGTIENSEGNFTSSETDSPELPSKSQGSGDT 264
+T S ++A TS + + SS +S TSS + +PS S S T
Sbjct: 191 STSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSST 250
Query: 265 PKTAPSQS 288
+ S S
Sbjct: 251 SSSLSSSS 258
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 28.7 bits (61), Expect = 0.66
Identities = 23/74 (31%), Positives = 33/74 (44%)
Frame = +1
Query: 109 NSAQTSNEDIIDDLTKDLKSSLGTIENSEGNFTSSETDSPELPSKSQGSGDTPKTAPSQS 288
N+A+ SN + + SS T N FT +E SP S +TPK S
Sbjct: 266 NAAKPSNSEECN--IPKFNSSFKT-SNDFFTFTKTEESSPYSFSFKLEDSNTPKFKSSSK 322
Query: 289 HVDKNYDFTEDEAK 330
V ++ FT+ EA+
Sbjct: 323 PVKSSFVFTKPEAE 336
>SPAC589.03c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 168
Score = 28.3 bits (60), Expect = 0.87
Identities = 24/113 (21%), Positives = 47/113 (41%), Gaps = 2/113 (1%)
Frame = +1
Query: 133 DIIDDLTKDLKSSLGTIENSEGNFTSSETDSPELPSKSQGS--GDTPKTAPSQSHVDKNY 306
DI D + +D+K + +ENS ++T+ + K + S PK++ + ++
Sbjct: 8 DIKDVVERDMKKNSKVVENSSARSLKNKTEENKTIDKHKSSVGPKEPKSSLEKPKANRKR 67
Query: 307 DFTEDEAKEGXXXXXXXXXXXXLKDAEVDMTDEEKEYRRSVAEEFKLTGNDAF 465
+ + ++D E +DEE E+ ++ K G DAF
Sbjct: 68 KQSYGLLHDIKELGGTEEDLELIEDVE---SDEELEFEEPNRKQPKKDGTDAF 117
>SPBC18H10.04c |sce3|tif48|translation initiation factor
eIF4B|Schizosaccharomyces pombe|chr 2|||Manual
Length = 388
Score = 28.3 bits (60), Expect = 0.87
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +1
Query: 145 DLTKDLKSSLGTIENSEGNFTSSETDSPELPSKSQGSGDTPKTAPSQSHVDKNY 306
D T + + I +G SSETDS +K+ + D P T ++ ++ +
Sbjct: 326 DKTDAIAEKVSDIRLGDGEKKSSETDSEVAATKTPATEDAPATNAGEAEEEEGW 379
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 27.5 bits (58), Expect = 1.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 433 EEFKLTGNDAFLVADYELSIEKYTEGLRKCP 525
E K GND F +Y+ + EKY+E L+ P
Sbjct: 224 ENTKNQGNDLFRQGNYQDAYEKYSEALQIDP 254
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 27.5 bits (58), Expect = 1.5
Identities = 22/86 (25%), Positives = 37/86 (43%)
Frame = +1
Query: 76 NLYTTMSERLKNSAQTSNEDIIDDLTKDLKSSLGTIENSEGNFTSSETDSPELPSKSQGS 255
N ++ E + +A EDI D++ D S +E SSE D+ E+ S QG
Sbjct: 467 NSPNSIRETEEYAASPKLEDIADEVETDATSQRELLERQIQKAESSE-DTSEIES-LQGK 524
Query: 256 GDTPKTAPSQSHVDKNYDFTEDEAKE 333
P+ + +Q + + E + E
Sbjct: 525 LSLPQVSSTQQEIQPSSSVPEAASNE 550
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 26.6 bits (56), Expect = 2.7
Identities = 27/130 (20%), Positives = 48/130 (36%), Gaps = 3/130 (2%)
Frame = +1
Query: 166 SSLGTIENSEGN-FTSSETDSPELPSKSQGSGDTPKTAPSQSHVDKNYDFTEDEAKEGXX 342
S ++++SE N TSS + S + S + + S+S + +E+ E
Sbjct: 12 SDAESVDSSEENRLTSSRLKKQDDSSSEEESSEEESASSSESESSEEESESEESEVEVPK 71
Query: 343 XXXXXXXXXXLKDAEVDMTDEEKEYRR--SVAEEFKLTGNDAFLVADYELSIEKYTEGLR 516
D+E +EE E V++E + + S E+ E R
Sbjct: 72 KKAVAASEDSESDSESSEEEEETESEEDSEVSDESESESESESESEEESESEEESDESER 131
Query: 517 KCPLQFTQQP 546
P F ++P
Sbjct: 132 SGPSSFLKKP 141
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 26.2 bits (55), Expect = 3.5
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
Frame = +1
Query: 133 DIIDDLTKDLKSSLGTIENSEGNFTSSETDSPELPSKSQGSGDTPKT-APSQS----HVD 297
D +D T + ++ T E S E SP P + PK+ +P Q+ +D
Sbjct: 1029 DAVDTSTATVAATTTTAEEELPQKESQERSSPS-PENQDSTPLAPKSVSPKQAARTLDID 1087
Query: 298 KNYDFTEDE 324
+NYD E E
Sbjct: 1088 ENYDDDEGE 1096
>SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 529
Score = 26.2 bits (55), Expect = 3.5
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +1
Query: 103 LKNSAQTSNEDIIDDLTKDLKSSLGTIENSEGNFTSSETDSPELPSK--SQGSGDTPKTA 276
L++ N + D+ D+K + GT++N F T + + SK S+ S +T
Sbjct: 239 LESKVLPQNNETSDEENVDVKPAAGTVKNVMQAFLQPATPAKDTASKEPSKSSQQPVRTK 298
Query: 277 P 279
P
Sbjct: 299 P 299
>SPBC19G7.18c ||SPBC19G7.11c|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 252
Score = 26.2 bits (55), Expect = 3.5
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 193 EGNFTSSETDSPELPSKSQGSGDTPKTAPSQS 288
+G F SS ++ P SK Q G P T S S
Sbjct: 113 QGRFPSSSSEFPPKNSKYQLPGSMPNTGASSS 144
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 25.8 bits (54), Expect = 4.7
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 187 NSEGNFTSSETDSPELPSKSQGSGDTP-KTAPSQSHV 294
NS +FTSS + +P + S SG P K+ S +HV
Sbjct: 206 NSSSSFTSSTSSTP-ISSSYSSSGTLPSKSNKSSNHV 241
>SPCC736.14 |dis1||microtubule-associated protein Dis1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 882
Score = 25.8 bits (54), Expect = 4.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 160 LKSSLGTIENSEGNFTSSETDSPELPSKSQGSGDTPKTAPS 282
+ +SL T E +F+S+ P L SKS G+T + + S
Sbjct: 235 ISNSLNTQEVVLPSFSSNAKPKPHLSSKSSSQGNTLQRSTS 275
>SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1154
Score = 25.8 bits (54), Expect = 4.7
Identities = 18/68 (26%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Frame = +1
Query: 211 SETDSPELPSKSQGSGD-TPKTAPSQSHVDKNYDFTEDEAKEGXXXXXXXXXXXXLKDAE 387
SE D+P ++Q + PK +PSQS N + K+ L +
Sbjct: 10 SERDNPGDKVETQSDKNHLPKASPSQSQSPVNTSLHNGDGKDNGVATEPVENKQILSERS 69
Query: 388 VDMTDEEK 411
V D EK
Sbjct: 70 VTRDDYEK 77
>SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 781
Score = 25.4 bits (53), Expect = 6.2
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 97 ERLKNSAQTSN--EDIIDDLTKDLKSSLGTIENSEGNFTSSETDSPELPSKSQ 249
+ LKNS S + +LG+ ++ GN S + S ELPSK++
Sbjct: 185 QHLKNSPPNSRTARKPVPRRANSASHNLGSTKSPNGNAKESLSRSAELPSKAK 237
>SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 358
Score = 25.0 bits (52), Expect = 8.1
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 427 VAEEFKLTGNDAFLVADYELSIEKYTEGL-RKC 522
VA+ F+ GN+ F Y+ + E YT+ L +KC
Sbjct: 63 VAQNFREHGNECFASKRYKDAEEFYTKALAQKC 95
>SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1038
Score = 25.0 bits (52), Expect = 8.1
Identities = 16/65 (24%), Positives = 29/65 (44%)
Frame = +1
Query: 121 TSNEDIIDDLTKDLKSSLGTIENSEGNFTSSETDSPELPSKSQGSGDTPKTAPSQSHVDK 300
+S E +D +L SS +N E S TD + + + ++ S+ ++
Sbjct: 36 SSEESESEDKESNLTSSENIGKNPERELNSDGTDRIIEEEEEEDDIENEASSFSEQSENE 95
Query: 301 NYDFT 315
NYDF+
Sbjct: 96 NYDFS 100
>SPBC3B9.19 |mge1||GrpE domain chaperone protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 223
Score = 25.0 bits (52), Expect = 8.1
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = +1
Query: 82 YTTMSERLKNSAQTSNEDIIDDLTKDLKSSLGTIENS 192
Y + R+K + + + LTKDL S+ +E +
Sbjct: 88 YRNLENRMKRDMEQTRAFAVQKLTKDLLDSVDNLERA 124
>SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase
Ubp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 875
Score = 25.0 bits (52), Expect = 8.1
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +1
Query: 178 TIENSEGNFTSSETDSPELPSKSQGSGDTPKTAPSQ-SHVDK 300
+I+N N TSSE + S TP T P + SH+ K
Sbjct: 20 SIKNGLNNLTSSELVNQMKKESLAASVKTPSTPPKECSHLKK 61
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 25.0 bits (52), Expect = 8.1
Identities = 15/70 (21%), Positives = 27/70 (38%)
Frame = +1
Query: 109 NSAQTSNEDIIDDLTKDLKSSLGTIENSEGNFTSSETDSPELPSKSQGSGDTPKTAPSQS 288
NS++ +++ + S GT G F D+P++P Q + P +
Sbjct: 25 NSSEPPTTSNVNNTQSTGRGSSGT-STEHGTFKKGRNDAPDVPQWKQVNAKNPVARDIFA 83
Query: 289 HVDKNYDFTE 318
+D F E
Sbjct: 84 RLDLENMFEE 93
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.133 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,113,142
Number of Sequences: 5004
Number of extensions: 40422
Number of successful extensions: 167
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 166
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 252150250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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