Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_N13
(570 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 283 6e-77
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 275 2e-74
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 268 2e-72
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 268 2e-72
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 267 3e-72
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 266 8e-72
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 188 2e-48
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 188 2e-48
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 137 5e-33
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 137 5e-33
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 135 2e-32
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 135 2e-32
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 134 6e-32
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 133 7e-32
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 131 4e-31
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 131 4e-31
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 129 1e-30
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 129 1e-30
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 129 1e-30
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 128 4e-30
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 127 5e-30
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 127 6e-30
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 122 1e-28
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 105 2e-23
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 105 2e-23
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 105 2e-23
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 31 0.58
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 31 0.77
U37548-4|AAA79200.2| 373|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 29 2.4
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 29 3.1
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 28 5.4
U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical pr... 27 7.2
U13071-2|AAL65793.1| 988|Caenorhabditis elegans Hypothetical pr... 27 7.2
AF039038-1|AAK21435.1| 877|Caenorhabditis elegans Hypothetical ... 27 7.2
U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical pr... 27 9.5
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 27 9.5
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 283 bits (694), Expect = 6e-77
Identities = 126/134 (94%), Positives = 132/134 (98%)
Frame = +1
Query: 130 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYV 309
MREIVH+QAGQCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGG YV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 310 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 489
PRA LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 490 RKEAESCDCLQGFQ 531
RKEAESCDCLQGFQ
Sbjct: 121 RKEAESCDCLQGFQ 134
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 275 bits (674), Expect = 2e-74
Identities = 123/134 (91%), Positives = 128/134 (95%)
Frame = +1
Query: 130 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYV 309
MREIVHVQAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GG YV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 310 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 489
PRAVLVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 490 RKEAESCDCLQGFQ 531
RKEAE CDCLQGFQ
Sbjct: 121 RKEAEGCDCLQGFQ 134
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 268 bits (657), Expect = 2e-72
Identities = 120/134 (89%), Positives = 127/134 (94%)
Frame = +1
Query: 130 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYV 309
MREIVH+QAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA YV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 310 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 489
PRAVLVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 490 RKEAESCDCLQGFQ 531
RKEAES DCLQGFQ
Sbjct: 121 RKEAESTDCLQGFQ 134
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 268 bits (657), Expect = 2e-72
Identities = 120/134 (89%), Positives = 127/134 (94%)
Frame = +1
Query: 130 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYV 309
MREIVH+QAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA YV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 310 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 489
PRAVLVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 490 RKEAESCDCLQGFQ 531
RKEAES DCLQGFQ
Sbjct: 121 RKEAESTDCLQGFQ 134
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 267 bits (655), Expect = 3e-72
Identities = 118/134 (88%), Positives = 127/134 (94%)
Frame = +1
Query: 130 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYV 309
MREIVHVQAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ G YV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 310 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 489
PRAVLVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 490 RKEAESCDCLQGFQ 531
RKEAE CDCLQGFQ
Sbjct: 121 RKEAEGCDCLQGFQ 134
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 266 bits (652), Expect = 8e-72
Identities = 117/134 (87%), Positives = 127/134 (94%)
Frame = +1
Query: 130 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYV 309
MREIVHVQAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ G YV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 310 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 489
PRAVLVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 490 RKEAESCDCLQGFQ 531
RKEAE CDCLQGFQ
Sbjct: 121 RKEAEGCDCLQGFQ 134
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 188 bits (458), Expect = 2e-48
Identities = 81/134 (60%), Positives = 106/134 (79%)
Frame = +1
Query: 130 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYV 309
M+EI++VQ GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G YV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 310 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 489
PRA+LVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 490 RKEAESCDCLQGFQ 531
R+EAE+ D L+GFQ
Sbjct: 121 RREAEAADSLEGFQ 134
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 188 bits (458), Expect = 2e-48
Identities = 81/134 (60%), Positives = 106/134 (79%)
Frame = +1
Query: 130 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYV 309
M+EI++VQ GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G YV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 310 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 489
PRA+LVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 490 RKEAESCDCLQGFQ 531
R+EAE+ D L+GFQ
Sbjct: 121 RREAEAADSLEGFQ 134
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 137 bits (332), Expect = 5e-33
Identities = 57/133 (42%), Positives = 84/133 (63%)
Frame = +1
Query: 130 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYV 309
MRE++ + GQ G QIG WE+ EHGI P G D E ++++ G YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 310 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 489
PR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 490 RKEAESCDCLQGF 528
R+ A++C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 137 bits (332), Expect = 5e-33
Identities = 57/133 (42%), Positives = 84/133 (63%)
Frame = +1
Query: 130 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYV 309
MRE++ + GQ G QIG WE+ EHGI P G D E ++++ G YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 310 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 489
PR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 490 RKEAESCDCLQGF 528
R+ A++C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 135 bits (327), Expect = 2e-32
Identities = 57/133 (42%), Positives = 85/133 (63%)
Frame = +1
Query: 130 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYV 309
MRE++ + GQ G QIG WE+ EHGI P G S + E ++++ G YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 310 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 489
PR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 490 RKEAESCDCLQGF 528
R+ A++C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 135 bits (327), Expect = 2e-32
Identities = 57/133 (42%), Positives = 85/133 (63%)
Frame = +1
Query: 130 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYV 309
MRE++ + GQ G QIG WE+ EHGI P G S + E ++++ G YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 310 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 489
PR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 490 RKEAESCDCLQGF 528
R+ A++C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 134 bits (323), Expect = 6e-32
Identities = 62/135 (45%), Positives = 84/135 (62%), Gaps = 2/135 (1%)
Frame = +1
Query: 130 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGT 303
MREIV + GQ G QIG WE+ EHGI P G D+ +E N +++E G
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 304 YVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 483
+VPRA+ VDLEP +D VR+G + ++F P+ + G+ A NN+A+GHYT G EL+D V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 484 VVRKEAESCDCLQGF 528
VR+ E C LQGF
Sbjct: 121 RVRRLTERCQSLQGF 135
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 133 bits (322), Expect = 7e-32
Identities = 58/133 (43%), Positives = 86/133 (64%), Gaps = 1/133 (0%)
Frame = +1
Query: 133 REIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAY-HGDSDLQLERINVYYNEASGGTYV 309
RE V + GQ G QIG WE+ EHG+D G + + + + + +++E+ G +V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 310 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 489
PRA+ VDLEP +D +R+G +G +F PD + G+ A NN+A+GHYT G EL+D VLD +
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRI 125
Query: 490 RKEAESCDCLQGF 528
RK+ E+C+ LQGF
Sbjct: 126 RKQTENCEGLQGF 138
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 131 bits (316), Expect = 4e-31
Identities = 54/133 (40%), Positives = 83/133 (62%)
Frame = +1
Query: 130 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYV 309
MRE++ + GQ G QIG WE+ EHGI P G + + ++++ G YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 310 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 489
PR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 490 RKEAESCDCLQGF 528
R+ A++C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 131 bits (316), Expect = 4e-31
Identities = 54/133 (40%), Positives = 83/133 (62%)
Frame = +1
Query: 130 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYV 309
MRE++ + GQ G QIG WE+ EHGI P G + + ++++ G YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 310 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 489
PR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 490 RKEAESCDCLQGF 528
R+ A++C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 129 bits (312), Expect = 1e-30
Identities = 57/135 (42%), Positives = 84/135 (62%), Gaps = 2/135 (1%)
Frame = +1
Query: 130 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGT 303
MRE++ + GQ G QIG WE+ EHGI P G D L + + +++E G
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 304 YVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 483
+VPRAV+VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 484 VVRKEAESCDCLQGF 528
+R+ A++C LQGF
Sbjct: 121 RIRRLADNCTGLQGF 135
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 129 bits (312), Expect = 1e-30
Identities = 57/135 (42%), Positives = 84/135 (62%), Gaps = 2/135 (1%)
Frame = +1
Query: 130 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGT 303
MRE++ + GQ G QIG WE+ EHGI P G D L + + +++E G
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 304 YVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 483
+VPRAV+VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 484 VVRKEAESCDCLQGF 528
+R+ A++C LQGF
Sbjct: 121 RIRRLADNCTGLQGF 135
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 129 bits (312), Expect = 1e-30
Identities = 57/135 (42%), Positives = 84/135 (62%), Gaps = 2/135 (1%)
Frame = +1
Query: 130 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGT 303
MRE++ + GQ G QIG WE+ EHGI P G D L + + +++E G
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 304 YVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 483
+VPRAV+VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 484 VVRKEAESCDCLQGF 528
+R+ A++C LQGF
Sbjct: 121 RIRRLADNCTGLQGF 135
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 128 bits (308), Expect = 4e-30
Identities = 59/135 (43%), Positives = 86/135 (63%), Gaps = 3/135 (2%)
Frame = +1
Query: 133 REIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNEASGGT 303
RE++ + GQ G QIG WE+ EHGI P G YH + D + E IN ++ E +GG
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
Query: 304 YVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 483
+VPR + VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V+D
Sbjct: 67 HVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMD 126
Query: 484 VVRKEAESCDCLQGF 528
V++ AE+C+ LQGF
Sbjct: 127 RVKRLAENCNGLQGF 141
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 127 bits (307), Expect = 5e-30
Identities = 56/134 (41%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
Frame = +1
Query: 133 REIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGTY 306
RE++ + GQ G QIG WE+ EHGI P G D L + + +++E G +
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 307 VPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 486
VPRAV+VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 487 VRKEAESCDCLQGF 528
+R+ A++C LQGF
Sbjct: 121 IRRLADNCTGLQGF 134
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 127 bits (306), Expect = 6e-30
Identities = 55/136 (40%), Positives = 86/136 (63%), Gaps = 2/136 (1%)
Frame = +1
Query: 127 KMREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGG 300
+ RE++ + GQ G Q+G WE+ EHGI P G + + L ++ N +++E G
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 301 TYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 480
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D V+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM 124
Query: 481 DVVRKEAESCDCLQGF 528
D VR+ E+C LQGF
Sbjct: 125 DRVRRLVENCRGLQGF 140
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 122 bits (295), Expect = 1e-28
Identities = 53/133 (39%), Positives = 84/133 (63%)
Frame = +1
Query: 130 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYV 309
MRE++ + GQ G QIG WE+ EHGI P G + D + ++++ G +V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSM-EPDGNSGSLGTFFSDTGYGRHV 59
Query: 310 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 489
PR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E++D+ LD +
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRI 119
Query: 490 RKEAESCDCLQGF 528
R+ A +C+ LQGF
Sbjct: 120 RRLANNCEGLQGF 132
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 105 bits (253), Expect = 2e-23
Identities = 49/110 (44%), Positives = 72/110 (65%), Gaps = 3/110 (2%)
Frame = +1
Query: 208 EHGIDPTGAYHGDSDL---QLERINVYYNEASGGTYVPRAVLVDLEPGTMDSVRSGPFGQ 378
EHGI P G YH + D + E IN ++ E +GG +VPR + VDLEP +D VR+G +
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRS 63
Query: 379 IFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 528
+F P+ + G+ A N +A+G YT G E++D V+D V++ AE+C+ LQGF
Sbjct: 64 LFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGF 113
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 105 bits (252), Expect = 2e-23
Identities = 52/132 (39%), Positives = 79/132 (59%), Gaps = 3/132 (2%)
Frame = +1
Query: 139 IVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYVPRA 318
++ V GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 319 VLVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVV 489
VLVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D++
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
Query: 490 RKEAESCDCLQG 525
+EAE+ + L G
Sbjct: 125 IREAENTNNLDG 136
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 105 bits (252), Expect = 2e-23
Identities = 52/132 (39%), Positives = 79/132 (59%), Gaps = 3/132 (2%)
Frame = +1
Query: 139 IVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYVPRA 318
++ V GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 319 VLVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVV 489
VLVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D++
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
Query: 490 RKEAESCDCLQG 525
+EAE+ + L G
Sbjct: 125 IREAENTNNLDG 136
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 31.1 bits (67), Expect = 0.58
Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
Frame = -2
Query: 563 EPVPPPRECVSWNPCRQSHDSASLRTTSKTEST----SSAPSV*CPLAQLLPAPDCPKTK 396
E VPP + PC + + TT+ T + AP P A PA P+T
Sbjct: 274 ETVPPAAQTTPQPPCTPRTTTTTTTTTTTTALPPCVYTPAPPATAPPATATPATQTPRTY 333
Query: 395 LSGRKICPKGPERTESMVPGSRST 324
+ I P++ ++ PG T
Sbjct: 334 STTTPIKTTVPQQWTTLPPGPEPT 357
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 30.7 bits (66), Expect = 0.77
Identities = 20/81 (24%), Positives = 35/81 (43%)
Frame = -2
Query: 566 PEPVPPPRECVSWNPCRQSHDSASLRTTSKTESTSSAPSV*CPLAQLLPAPDCPKTKLSG 387
P P P P + NP + +A + TT T++ AP+ P+ +P+P P +
Sbjct: 221 PVPKPAPVTAPAPNPPAPENTTAKVETTKPTKAAPPAPT---PVPNPVPSPPPPPANTTV 277
Query: 386 RKICPKGPERTESMVPGSRST 324
+ P T+ P + +T
Sbjct: 278 TEEKTTVPPATDEPAPKTVAT 298
>U37548-4|AAA79200.2| 373|Caenorhabditis elegans Hypothetical
protein C54D2.1 protein.
Length = 373
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 287 KHPEALMYLAPFLLTSSLAPWTLSAQDPLDKSFAPITSFS--DSPVPVTTGLRDTT 448
+H A YLA F+ ++ T A + AP T+FS +P P TT + TT
Sbjct: 244 RHASAATYLAYFVASAQTTTTTELATTTTTTTEAPTTTFSTTTTPAPTTTFIIPTT 299
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +2
Query: 293 PEALMYLAPFLLTSSLAPWTLSAQDPLDKSFAPITSFSDSPVPV--TTGLRDTTQRV 457
P Y +P T+ P T + +DP F + +++P+P+ L++T+++V
Sbjct: 154 PYQYHYTSPTTTTTKRPPTTTTTEDPQPFEFHELQEQAENPIPLDPKNSLQETSEQV 210
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 28.7 bits (61), Expect = 3.1
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Frame = -2
Query: 512 SHDSASLRTTSKTESTSSAPSV*CPLAQLL-----PAPDCPKTKLSGRKICPKGPERTES 348
S A R + + S SS+PS CP LL PAP P + G PK +
Sbjct: 294 SDGRAGSRISLASTSASSSPSDPCPSPPLLPPVCPPAPPPPPPPIGGLTSPPKDALKNVP 353
Query: 347 MVPGSRST 324
PG+ T
Sbjct: 354 EPPGNMKT 361
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 196 IISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYVPRAVLVDL 333
I S+ H I T + H DS R + GG + R +L+D+
Sbjct: 101 IASEHHHISTTSSCHSDSGNSSSRDVITPFTVHGGASIGRLILIDI 146
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.9 bits (59), Expect = 5.4
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = -2
Query: 512 SHDSASLRTTSKTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKGPERTESMVPGS 333
S S ++ T + TESTS++PS + + + P T +G P T S S
Sbjct: 466 SSSSTTVTTPTSTESTSTSPS-----STVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSS 520
Query: 332 RSTRTARGT 306
++ T T
Sbjct: 521 TASSTQSST 529
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.9 bits (59), Expect = 5.4
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = -2
Query: 512 SHDSASLRTTSKTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKGPERTESMVPGS 333
S S ++ T + TESTS++PS + + + P T +G P T S S
Sbjct: 466 SSSSTTVTTPTSTESTSTSPS-----STVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSS 520
Query: 332 RSTRTARGT 306
++ T T
Sbjct: 521 TASSTQSST 529
>U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical
protein F45E4.7a protein.
Length = 868
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -2
Query: 560 PVPPPRECVSWNPCRQSHDSASLRTTS-KTESTSSAPSV*CPLAQLLPAP 414
P PPP S++P R+ H+S ++TS P P Q+ PAP
Sbjct: 44 PDPPPLPPHSFSPRRKVHESIVREVREYHLQTTSRIPFSPPPTIQIHPAP 93
>U13071-2|AAL65793.1| 988|Caenorhabditis elegans Hypothetical
protein T22F7.3 protein.
Length = 988
Score = 27.5 bits (58), Expect = 7.2
Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Frame = -2
Query: 563 EPVPPPRECVSWNPCRQSHDSASLRTTSKTESTSSAPSV*CPLAQLLPAPDCPKTKLSGR 384
E V P C S C ++ RT T SSA CPL + P T L+
Sbjct: 87 EAVWPGTICTSAGLCECPKETVPSRTRDGTVCISSAIPPACPLPEAHNGNPNPATVLANP 146
Query: 383 KICPKGPERTESMVPGSRST--RTARG 309
P P ++ S S+ RT+ G
Sbjct: 147 STHPLNPGNYMPVLCNSLSSEVRTSNG 173
>AF039038-1|AAK21435.1| 877|Caenorhabditis elegans Hypothetical
protein K06A5.4 protein.
Length = 877
Score = 27.5 bits (58), Expect = 7.2
Identities = 20/70 (28%), Positives = 27/70 (38%)
Frame = -3
Query: 520 VDNHMTLLPCELHPRRNRRAQHPLCSVP*PSCYRHRTVRKRSYRGERFVQRVLSGQSPWC 341
VD+ + E P R R+ S P P RHR+ + Y R+ QR S W
Sbjct: 329 VDSVLDTFHFESTPGRVRKPGRRNVSSPSPEP-RHRSSSRDGYEQSRYSQRYEHDNSRWS 387
Query: 340 QARGQQERRE 311
+ R E
Sbjct: 388 RHNATYRRHE 397
>U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical
protein C18H9.8 protein.
Length = 674
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = +2
Query: 254 YSWSVLMFITMKHPEALMYLAPFLLTSSLAPWTLSAQDPLDKSFAPITSFSDSPVPVTTG 433
+SWSVL+ +T KH T+S P T + + P ++ P + P P T
Sbjct: 31 HSWSVLVSMTTKHASTTNTRMERPSTASSRPRTSTGRAPSARARPPSAMRAPPPQP-TYE 89
Query: 434 LRDTT 448
R TT
Sbjct: 90 NRPTT 94
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/65 (23%), Positives = 31/65 (47%)
Frame = -2
Query: 527 NPCRQSHDSASLRTTSKTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKGPERTES 348
NP + S+S +T + T++T +PS ++Q P T ++ + + + + +
Sbjct: 390 NPTTTAQLSSSSKTLTSTQTTQGSPST---VSQTTPGVSSASTGMTTSQASLRSTQNSVT 446
Query: 347 MVPGS 333
PGS
Sbjct: 447 STPGS 451
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,005,379
Number of Sequences: 27780
Number of extensions: 309227
Number of successful extensions: 1161
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1142
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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