Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_N13
         (570 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    25   0.70 
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    24   1.2  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                24   1.2  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    23   2.8  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    23   2.8  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    23   2.8  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   6.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   6.5  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    21   8.6  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 24.6 bits (51), Expect = 0.70
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = +1

Query: 466 VDSVLDVVRKEAESCDCLQG 525
           +DS+++++R   ++CD L G
Sbjct: 106 IDSIINIIRVRVDACDRLWG 125


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -2

Query: 257 CKSESPWYAPVGSIPC 210
           CK +  WY P G   C
Sbjct: 234 CKGDGKWYLPSGGCHC 249


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 488 FARKQSHVIVYKDSNSHTPLE 550
           FA   SH I+Y  +  H P++
Sbjct: 254 FAGLHSHTIIYLSAKGHRPID 274


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/48 (25%), Positives = 22/48 (45%)
 Frame = -3

Query: 421 RHRTVRKRSYRGERFVQRVLSGQSPWCQARGQQERREVHKCLRMLHCN 278
           R R   + SY+ ER  ++         + R ++E+ + HK +  L  N
Sbjct: 41  RSREREQNSYKNEREYRKYRETSKERSRDRKEREKSKEHKIISSLSNN 88


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/48 (25%), Positives = 22/48 (45%)
 Frame = -3

Query: 421 RHRTVRKRSYRGERFVQRVLSGQSPWCQARGQQERREVHKCLRMLHCN 278
           R R   + SY+ ER  ++         + R ++E+ + HK +  L  N
Sbjct: 41  RSREREQNSYKNEREYRKYRETSKERSRDRKEREKSKEHKIISSLSNN 88


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/48 (25%), Positives = 22/48 (45%)
 Frame = -3

Query: 421 RHRTVRKRSYRGERFVQRVLSGQSPWCQARGQQERREVHKCLRMLHCN 278
           R R   + SY+ ER  ++         + R ++E+ + HK +  L  N
Sbjct: 41  RSREREQNSYKNEREYRKYRETSKERSRDRKEREKSKEHKIISSLSNN 88


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 5/36 (13%)
 Frame = +3

Query: 477 LGCSSQGSRVM*LSTRIPTHTLP-----WRWYRLRY 569
           LG  S+   ++ ++T I    LP     WRW RL Y
Sbjct: 32  LGQDSKAKAIV-VNTLISNDILPVCNGLWRWIRLTY 66


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 5/36 (13%)
 Frame = +3

Query: 477 LGCSSQGSRVM*LSTRIPTHTLP-----WRWYRLRY 569
           LG  S+   ++ ++T I    LP     WRW RL Y
Sbjct: 70  LGQDSKAKAIV-VNTLISNDILPVCNGLWRWIRLTY 104


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 569 IPEPVPPPRECVSWNP 522
           IP PVP P  C ++ P
Sbjct: 342 IPVPVPVPIHCGNFPP 357


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,963
Number of Sequences: 438
Number of extensions: 3736
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)