Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_N12
(499 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U48508-1|AAC51191.1| 5038|Homo sapiens skeletal muscle ryanodine... 31 2.2
J05200-1|AAA60294.1| 5032|Homo sapiens RYR1 protein. 31 2.2
AB209425-1|BAD92662.1| 1231|Homo sapiens ryanodine receptor 1 (s... 31 2.2
BC113015-1|AAI13016.1| 691|Homo sapiens ZNF180 protein protein. 30 3.9
BC033642-1|AAH33642.1| 691|Homo sapiens zinc finger protein 180... 30 3.9
AF192913-1|AAF07950.1| 692|Homo sapiens zinc finger protein ZNF... 30 3.9
AC069278-1|AAF71790.1| 692|Homo sapiens ZNF180 protein. 30 3.9
X17094-1|CAA34948.1| 794|Homo sapiens protein ( Human fur mRNA ... 29 6.8
BC012181-1|AAH12181.1| 794|Homo sapiens furin (paired basic ami... 29 6.8
BC039654-1|AAH39654.1| 623|Homo sapiens TBCD protein protein. 29 9.0
BC012824-1|AAH12824.2| 387|Homo sapiens TBCD protein protein. 29 9.0
BC003094-1|AAH03094.1| 1192|Homo sapiens tubulin folding cofacto... 29 9.0
AL133562-1|CAB63716.1| 1050|Homo sapiens hypothetical protein pr... 29 9.0
AF193042-1|AAG22470.1| 184|Homo sapiens unknown protein. 29 9.0
AB023205-1|BAA76832.2| 1210|Homo sapiens KIAA0988 protein protein. 29 9.0
>U48508-1|AAC51191.1| 5038|Homo sapiens skeletal muscle ryanodine
receptor protein.
Length = 5038
Score = 31.1 bits (67), Expect = 2.2
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Frame = +1
Query: 208 MNRNISNHEEALIPVAVVCFEKISK--------TNDIETSGILTLVSVFFLIATFAVYTY 363
+ +N++ AL+PV F+ I++ +D++ S TL S++ L T TY
Sbjct: 3125 VGQNLTYTTVALLPVLTTLFQHIAQHQFGDDVILDDVQVSCYRTLCSIYSLGTT--KNTY 3182
Query: 364 LPQLRDLQGMCYICMCISMALGFL 435
+ +LR G C + +M + FL
Sbjct: 3183 VEKLRPALGECLARLAAAMPVAFL 3206
>J05200-1|AAA60294.1| 5032|Homo sapiens RYR1 protein.
Length = 5032
Score = 31.1 bits (67), Expect = 2.2
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Frame = +1
Query: 208 MNRNISNHEEALIPVAVVCFEKISK--------TNDIETSGILTLVSVFFLIATFAVYTY 363
+ +N++ AL+PV F+ I++ +D++ S TL S++ L T TY
Sbjct: 3124 VGQNLTYTTVALLPVLTTLFQHIAQHQFGDDVILDDVQVSCYRTLCSIYSLGTT--KNTY 3181
Query: 364 LPQLRDLQGMCYICMCISMALGFL 435
+ +LR G C + +M + FL
Sbjct: 3182 VEKLRPALGECLARLAAAMPVAFL 3205
>AB209425-1|BAD92662.1| 1231|Homo sapiens ryanodine receptor 1
(skeletal) variant protein.
Length = 1231
Score = 31.1 bits (67), Expect = 2.2
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Frame = +1
Query: 208 MNRNISNHEEALIPVAVVCFEKISK--------TNDIETSGILTLVSVFFLIATFAVYTY 363
+ +N++ AL+PV F+ I++ +D++ S TL S++ L T TY
Sbjct: 70 VGQNLTYTTVALLPVLTTLFQHIAQHQFGDDVILDDVQVSCYRTLCSIYSLGTT--KNTY 127
Query: 364 LPQLRDLQGMCYICMCISMALGFL 435
+ +LR G C + +M + FL
Sbjct: 128 VEKLRPALGECLARLAAAMPVAFL 151
>BC113015-1|AAI13016.1| 691|Homo sapiens ZNF180 protein protein.
Length = 691
Score = 30.3 bits (65), Expect = 3.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 204 SNAVVIWIFNEDEPW*ISCGDFVTCKNNIFKQ 109
+N V I F D+PW SC + CK+ + KQ
Sbjct: 133 ANGVKIERFTRDDPWLSSCEEVDDCKDQLEKQ 164
>BC033642-1|AAH33642.1| 691|Homo sapiens zinc finger protein 180
protein.
Length = 691
Score = 30.3 bits (65), Expect = 3.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 204 SNAVVIWIFNEDEPW*ISCGDFVTCKNNIFKQ 109
+N V I F D+PW SC + CK+ + KQ
Sbjct: 133 ANGVKIERFTRDDPWLSSCEEVDDCKDQLEKQ 164
>AF192913-1|AAF07950.1| 692|Homo sapiens zinc finger protein ZNF180
protein.
Length = 692
Score = 30.3 bits (65), Expect = 3.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 204 SNAVVIWIFNEDEPW*ISCGDFVTCKNNIFKQ 109
+N V I F D+PW SC + CK+ + KQ
Sbjct: 134 ANGVKIERFTRDDPWLSSCEEVDDCKDQLEKQ 165
>AC069278-1|AAF71790.1| 692|Homo sapiens ZNF180 protein.
Length = 692
Score = 30.3 bits (65), Expect = 3.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 204 SNAVVIWIFNEDEPW*ISCGDFVTCKNNIFKQ 109
+N V I F D+PW SC + CK+ + KQ
Sbjct: 134 ANGVKIERFTRDDPWLSSCEEVDDCKDQLEKQ 165
>X17094-1|CAA34948.1| 794|Homo sapiens protein ( Human fur mRNA for
furin. ).
Length = 794
Score = 29.5 bits (63), Expect = 6.8
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = -2
Query: 141 FVTCKNNIFKQHSSI-CTGYVNSVLGVAISS--RFDNLP 34
FV N ++H S C GY NS+ ++ISS +F N+P
Sbjct: 289 FVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVP 327
>BC012181-1|AAH12181.1| 794|Homo sapiens furin (paired basic amino
acid cleaving enzyme) protein.
Length = 794
Score = 29.5 bits (63), Expect = 6.8
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = -2
Query: 141 FVTCKNNIFKQHSSI-CTGYVNSVLGVAISS--RFDNLP 34
FV N ++H S C GY NS+ ++ISS +F N+P
Sbjct: 289 FVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVP 327
>BC039654-1|AAH39654.1| 623|Homo sapiens TBCD protein protein.
Length = 623
Score = 29.1 bits (62), Expect = 9.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 247 VLKLLHG*RYFCSFVQCSSDLDLQRRRTLVNLVWRLCH 134
+ KLL G FC VQ D+ RR+ L+ L LCH
Sbjct: 516 IQKLLSGIAVFCGMVQFPGDV---RRQALLQLCLLLCH 550
>BC012824-1|AAH12824.2| 387|Homo sapiens TBCD protein protein.
Length = 387
Score = 29.1 bits (62), Expect = 9.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 247 VLKLLHG*RYFCSFVQCSSDLDLQRRRTLVNLVWRLCH 134
+ KLL G FC VQ D+ RR+ L+ L LCH
Sbjct: 280 IQKLLSGIAVFCEMVQFPGDV---RRQALLQLCLLLCH 314
>BC003094-1|AAH03094.1| 1192|Homo sapiens tubulin folding cofactor D
protein.
Length = 1192
Score = 29.1 bits (62), Expect = 9.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 247 VLKLLHG*RYFCSFVQCSSDLDLQRRRTLVNLVWRLCH 134
+ KLL G FC VQ D+ RR+ L+ L LCH
Sbjct: 1085 IQKLLSGIAVFCGMVQFPGDV---RRQALLQLCLLLCH 1119
>AL133562-1|CAB63716.1| 1050|Homo sapiens hypothetical protein
protein.
Length = 1050
Score = 29.1 bits (62), Expect = 9.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 247 VLKLLHG*RYFCSFVQCSSDLDLQRRRTLVNLVWRLCH 134
+ KLL G FC VQ D+ RR+ L+ L LCH
Sbjct: 943 IQKLLSGIAVFCGMVQFPGDV---RRQALLQLCLLLCH 977
>AF193042-1|AAG22470.1| 184|Homo sapiens unknown protein.
Length = 184
Score = 29.1 bits (62), Expect = 9.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 247 VLKLLHG*RYFCSFVQCSSDLDLQRRRTLVNLVWRLCH 134
+ KLL G FC VQ D+ RR+ L+ L LCH
Sbjct: 77 IQKLLSGIAVFCGMVQFPGDV---RRQALLQLCLLLCH 111
>AB023205-1|BAA76832.2| 1210|Homo sapiens KIAA0988 protein protein.
Length = 1210
Score = 29.1 bits (62), Expect = 9.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 247 VLKLLHG*RYFCSFVQCSSDLDLQRRRTLVNLVWRLCH 134
+ KLL G FC VQ D+ RR+ L+ L LCH
Sbjct: 1103 IQKLLSGIAVFCGMVQFPGDV---RRQALLQLCLLLCH 1137
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,430,248
Number of Sequences: 237096
Number of extensions: 1515494
Number of successful extensions: 2912
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2912
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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