Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_N12
(499 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61953-1|AAC48075.2| 569|Caenorhabditis elegans Hypothetical pr... 29 2.5
AL110482-4|CAB60337.1| 371|Caenorhabditis elegans Hypothetical ... 27 5.7
AF000261-8|AAB52929.1| 376|Caenorhabditis elegans T box family ... 27 7.6
Z83225-1|CAB05721.1| 324|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z81097-3|CAB03167.1| 296|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z81045-6|CAB02820.1| 324|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z81045-5|CAB02815.1| 322|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z74033-7|CAA98472.2| 325|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical p... 27 10.0
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 27 10.0
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 27 10.0
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 27 10.0
Z69361-1|CAE17943.1| 468|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical pr... 27 10.0
M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein ( C.ele... 27 10.0
AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical ... 27 10.0
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 27 10.0
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 27 10.0
AC024840-2|AAX55682.1| 434|Caenorhabditis elegans Hypothetical ... 27 10.0
AC024840-1|AAF59619.2| 427|Caenorhabditis elegans Hypothetical ... 27 10.0
>U61953-1|AAC48075.2| 569|Caenorhabditis elegans Hypothetical
protein R08C7.6 protein.
Length = 569
Score = 28.7 bits (61), Expect = 2.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 154 DSPGFVFVEDPNHYC 198
D PGF F DPNH C
Sbjct: 473 DCPGFYFHSDPNHQC 487
>AL110482-4|CAB60337.1| 371|Caenorhabditis elegans Hypothetical
protein Y39G8B.3 protein.
Length = 371
Score = 27.5 bits (58), Expect = 5.7
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1
Query: 262 CFEKISKTNDIETSGILTLVSVFFLIATFAVYTYLPQLRDLQGMCYICM 408
CFE ISK + +G +V + L A F + PQL + +C+I +
Sbjct: 257 CFEMISK---VLIAGFF-IVCLGLLTAIFLFFNLFPQLDTVLNLCFIAV 301
>AF000261-8|AAB52929.1| 376|Caenorhabditis elegans T box family
protein 18 protein.
Length = 376
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 397 STYPEDLLVAVNMYTQQKLLSRKTL 323
+T+PE V V++Y QK+ KTL
Sbjct: 330 ATFPETSFVTVSIYRNQKIKEMKTL 354
>Z83225-1|CAB05721.1| 324|Caenorhabditis elegans Hypothetical
protein F42H11.1 protein.
Length = 324
Score = 26.6 bits (56), Expect = 10.0
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 160 PGFVFVEDPNHYCIGQMNRNISNHEEALIPVA 255
PG DPN+ + +N N+ ++ P A
Sbjct: 118 PGMAATHDPNYQTLAGLNNNVFGKKDGAAPAA 149
>Z81097-3|CAB03167.1| 296|Caenorhabditis elegans Hypothetical
protein K07A1.5 protein.
Length = 296
Score = 26.6 bits (56), Expect = 10.0
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 160 PGFVFVEDPNHYCIGQMNRNISNHEEALIPVA 255
PG DPN+ + +N N+ ++ P A
Sbjct: 132 PGMAATHDPNYQTLAGLNNNVFGKKDGAAPAA 163
>Z81045-6|CAB02820.1| 324|Caenorhabditis elegans Hypothetical
protein F42H11.1 protein.
Length = 324
Score = 26.6 bits (56), Expect = 10.0
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 160 PGFVFVEDPNHYCIGQMNRNISNHEEALIPVA 255
PG DPN+ + +N N+ ++ P A
Sbjct: 118 PGMAATHDPNYQTLAGLNNNVFGKKDGAAPAA 149
>Z81045-5|CAB02815.1| 322|Caenorhabditis elegans Hypothetical
protein C36F7.5 protein.
Length = 322
Score = 26.6 bits (56), Expect = 10.0
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 160 PGFVFVEDPNHYCIGQMNRNISNHEEALIPVA 255
PG DPN+ + +N N+ ++ P A
Sbjct: 116 PGMAATHDPNYQTLAGLNNNVFGKKDGAAPAA 147
>Z74033-7|CAA98472.2| 325|Caenorhabditis elegans Hypothetical
protein F38B7.4 protein.
Length = 325
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/41 (29%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = -2
Query: 288 VGF*NFFKAYYSYRY*SFFMVRDI--SVHLSNAVVIWIFNE 172
+ F +F ++Y YR+ +FF + S+H + ++ +FNE
Sbjct: 252 ISFTFYFNSFYDYRFWTFFCGTFVWQSLHSLDGFIMIMFNE 292
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Frame = +1
Query: 19 QCCP---NGQIIKPRGYCDAQHRVNITCANG 102
QCCP II+P C + ++ CANG
Sbjct: 372 QCCPVCDEPTIIRPPATCPSLELCSLRCANG 402
>Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Frame = +1
Query: 19 QCCP---NGQIIKPRGYCDAQHRVNITCANG 102
QCCP II+P C + ++ CANG
Sbjct: 306 QCCPVCDEPTIIRPPATCPSLELCSLRCANG 336
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Frame = +1
Query: 19 QCCP---NGQIIKPRGYCDAQHRVNITCANG 102
QCCP II+P C + ++ CANG
Sbjct: 306 QCCPVCDEPTIIRPPATCPSLELCSLRCANG 336
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Frame = +1
Query: 19 QCCP---NGQIIKPRGYCDAQHRVNITCANG 102
QCCP II+P C + ++ CANG
Sbjct: 372 QCCPVCDEPTIIRPPATCPSLELCSLRCANG 402
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Frame = +1
Query: 19 QCCP---NGQIIKPRGYCDAQHRVNITCANG 102
QCCP II+P C + ++ CANG
Sbjct: 306 QCCPVCDEPTIIRPPATCPSLELCSLRCANG 336
>Z69361-1|CAE17943.1| 468|Caenorhabditis elegans Hypothetical
protein T13H10.2 protein.
Length = 468
Score = 26.6 bits (56), Expect = 10.0
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +3
Query: 279 KNQRH*N*RYIDTCFSVFLD--SNFCCVYIF 365
K RH N RY + CFS+ L + F CV IF
Sbjct: 20 KLPRHQNIRYHEKCFSIPLHTLNYFLCVIIF 50
>Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 26.6 bits (56), Expect = 10.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 13 ARQCCPNGQIIKPRGYCDAQH 75
+R C NG + K GYC+ Q+
Sbjct: 451 SRHPCKNGGVCKNTGYCECQY 471
>Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 26.6 bits (56), Expect = 10.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 13 ARQCCPNGQIIKPRGYCDAQH 75
+R C NG + K GYC+ Q+
Sbjct: 451 SRHPCKNGGVCKNTGYCECQY 471
>M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein (
C.elegans glp-1 gene,complete cds. ).
Length = 1295
Score = 26.6 bits (56), Expect = 10.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 13 ARQCCPNGQIIKPRGYCDAQH 75
+R C NG + K GYC+ Q+
Sbjct: 451 SRHPCKNGGVCKNTGYCECQY 471
>AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Frame = +1
Query: 19 QCCP---NGQIIKPRGYCDAQHRVNITCANG 102
QCCP II+P C + ++ CANG
Sbjct: 306 QCCPVCDEPTIIRPPATCPSLELCSLRCANG 336
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Frame = +1
Query: 19 QCCP---NGQIIKPRGYCDAQHRVNITCANG 102
QCCP II+P C + ++ CANG
Sbjct: 306 QCCPVCDEPTIIRPPATCPSLELCSLRCANG 336
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Frame = +1
Query: 19 QCCP---NGQIIKPRGYCDAQHRVNITCANG 102
QCCP II+P C + ++ CANG
Sbjct: 306 QCCPVCDEPTIIRPPATCPSLELCSLRCANG 336
>AC024840-2|AAX55682.1| 434|Caenorhabditis elegans Hypothetical
protein Y59H11AL.1b protein.
Length = 434
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 381 SSGYVLYLYVYQHGFRISIIGHTAVEPWI 467
S GY+LYL+ + HG +S H+ V P I
Sbjct: 310 SWGYILYLWWFAHGLAMS---HSMVNPII 335
>AC024840-1|AAF59619.2| 427|Caenorhabditis elegans Hypothetical
protein Y59H11AL.1a protein.
Length = 427
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 381 SSGYVLYLYVYQHGFRISIIGHTAVEPWI 467
S GY+LYL+ + HG +S H+ V P I
Sbjct: 310 SWGYILYLWWFAHGLAMS---HSMVNPII 335
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,977,543
Number of Sequences: 27780
Number of extensions: 249557
Number of successful extensions: 740
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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