Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_N11
         (463 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    25   0.30 
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    25   0.30 
L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    22   3.7  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    21   6.5  

>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 25.4 bits (53), Expect = 0.30
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +2

Query: 281 VTSSTSTWVMSPYCSLRVVRPFVCTLVP 364
           +T +T+ + + P+C   V+ PF C + P
Sbjct: 37  MTHTTNAFCL-PFCGPNVINPFFCDMSP 63


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 25.4 bits (53), Expect = 0.30
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +2

Query: 281 VTSSTSTWVMSPYCSLRVVRPFVCTLVP 364
           +T +T+ + + P+C   V+ PF C + P
Sbjct: 36  MTHTTNAFCL-PFCGPNVINPFFCDMSP 62


>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = -2

Query: 186 PQCPFQC*SSLGLVSHNPLHPAASPHSCQH 97
           P+C  +      L +H  LH    P+ C H
Sbjct: 13  PECHKRFTRDHHLKTHMRLHTGEKPYHCSH 42


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = -2

Query: 150 LVSHNPLHPAASPHSCQH 97
           L  H   H    P SCQH
Sbjct: 58  LQGHIRTHTGEKPFSCQH 75


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,539
Number of Sequences: 438
Number of extensions: 2554
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12312900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)