Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_N08
(356 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0760 + 27017956-27018433,27018487-27019234,27023760-270243... 31 0.20
06_03_0345 + 19758188-19758382,19759857-19759952,19760061-197601... 31 0.20
11_06_0179 + 20952070-20955228 30 0.61
06_03_0640 - 23059473-23060489,23060592-23060651,23063163-230632... 30 0.61
04_04_1671 + 35231546-35232430,35232517-35232837 30 0.61
12_01_0500 + 3966456-3968556,3968640-3969087,3969524-3969718,396... 29 0.81
12_01_0631 - 5234452-5234468,5234536-5234839,5234926-5235810 29 1.4
08_02_1029 - 23768228-23768548,23768635-23769519 29 1.4
07_01_1077 - 9687394-9687515,9696615-9696733,9696815-9697104,969... 29 1.4
05_04_0117 + 18136189-18137073,18137160-18137516 29 1.4
04_04_0285 - 24136865-24137000,24137554-24137611,24138142-241414... 29 1.4
08_02_1571 - 27935756-27935950,27936048-27936199,27936294-279364... 28 1.9
05_01_0476 - 3896314-3898725 28 1.9
12_01_0404 + 3200787-3200898,3201016-3201091,3201442-3201544,320... 28 2.5
08_02_0746 + 20721421-20721649,20722912-20722971,20723318-207233... 28 2.5
06_03_1346 + 29480482-29480676,29480754-29481067,29481164-294812... 28 2.5
03_06_0517 + 34466743-34466879,34468478-34468588,34468997-344690... 27 3.3
02_04_0624 + 24538095-24538183,24538429-24538612,24538725-245388... 27 3.3
08_02_1242 - 25513665-25513997,25514184-25514257,25514317-255144... 27 4.3
06_03_1500 + 30602846-30603185,30603244-30603323,30603477-306035... 27 4.3
03_04_0204 - 18444903-18445054,18445445-18445676,18445765-184458... 27 4.3
01_06_1142 + 34856497-34856698,34857852-34858402 27 4.3
05_07_0274 - 28873531-28873644,28873727-28873981,28874111-288741... 27 5.7
03_06_0769 + 36134298-36134356,36134740-36134919,36134975-361350... 27 5.7
02_05_0473 + 29319824-29322511,29322659-29322820,29324133-293242... 27 5.7
10_08_0231 - 16045293-16045309,16045377-16045677,16045764-16046648 26 7.6
10_06_0187 - 11598240-11599508 26 7.6
06_01_0026 + 265755-265968,267319-267468,267694-267738,267786-26... 26 7.6
05_05_0267 - 23704249-23704401,23704476-23704780,23704967-237056... 26 7.6
03_06_0448 - 34005581-34005655,34005735-34005830,34006669-340076... 26 7.6
>11_06_0760 + 27017956-27018433,27018487-27019234,27023760-27024378,
27030755-27032440
Length = 1176
Score = 31.5 bits (68), Expect = 0.20
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 16 NKDSFTIDNNKNQTESKCDNDN-STNKSPKKMKQRRKSPIDNVANDVNLNTTSELVNQKN 192
NK++ NK TE +N N++ MK+ S ++NVA + N + N++N
Sbjct: 1096 NKENVASATNKEGTEFIIENVTLEANEATAAMKEATTSTVENVATEGNKENVTTDTNKEN 1155
Query: 193 I 195
+
Sbjct: 1156 V 1156
>06_03_0345 +
19758188-19758382,19759857-19759952,19760061-19760144,
19760504-19760573,19760934-19761838,19763661-19764287
Length = 658
Score = 31.5 bits (68), Expect = 0.20
Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 16 NKDSFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRKSPID--NVANDVNLNTTSELVNQK 189
+ DS T +KN + K D ++ PK + + P++ N + V+ L+NQ
Sbjct: 471 DSDSSTSKGDKNAKDGKDKGDKDKSEEPKDDEAGEEEPLEFNNFQDQVDYGVHQALINQS 530
Query: 190 NINHVTSTIDNNYQQII 240
+ + +T+ N + ++
Sbjct: 531 GV--LVNTLTNMIKSVV 545
>11_06_0179 + 20952070-20955228
Length = 1052
Score = 29.9 bits (64), Expect = 0.61
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 10/90 (11%)
Frame = +1
Query: 19 KDSFTIDNN---KNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTSELVN-- 183
+DSF + N+ + S ++ + K R+K +NV +DV+LN N
Sbjct: 401 EDSFPVPNSAVPSSLRRSARRKQDAGDNGSMNSKVRKKQKKNNVLSDVDLNCQQIFNNNG 460
Query: 184 -----QKNINHVTSTIDNNYQQIIQDMDSK 258
Q HV+ST+D + + D DSK
Sbjct: 461 TSGDKQSAPPHVSSTVDIQDKTKVTDADSK 490
>06_03_0640 -
23059473-23060489,23060592-23060651,23063163-23063283,
23063476-23065496
Length = 1072
Score = 29.9 bits (64), Expect = 0.61
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +1
Query: 13 KNKDSFTIDNNK--NQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTSELVNQ 186
KN DS + +++ QT S D S +SPKK P++ + D+ + ++ E N
Sbjct: 564 KNVDSASASDSQLDPQTLSPQDKFESKLQSPKKDAGSILFPVEQIKEDLLVKSSPEKANA 623
Query: 187 KNINHVTSTI 216
+NI+ + +I
Sbjct: 624 ENIDTGSQSI 633
>04_04_1671 + 35231546-35232430,35232517-35232837
Length = 401
Score = 29.9 bits (64), Expect = 0.61
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 1 GTRKKNKDSFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRK 123
G K +DN++ ++K ++ S NK PK+ R+K
Sbjct: 338 GQTGSRKRKLVLDNDEGDDDNKSEDKGSPNKLPKRTMPRKK 378
>12_01_0500 +
3966456-3968556,3968640-3969087,3969524-3969718,
3969891-3970119
Length = 990
Score = 29.5 bits (63), Expect = 0.81
Identities = 28/119 (23%), Positives = 45/119 (37%), Gaps = 1/119 (0%)
Frame = +1
Query: 1 GTRKKNKDSFTIDNNK-NQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTSEL 177
GT KN+ SF +N K + E+ ++ T KS +++ D+ TT +
Sbjct: 274 GTPSKNQTSFDDENGKMDGVETVAEDGKVTEKSSEQVPTNG----DDGGGGGEAQTTDD- 328
Query: 178 VNQKNINHVTSTIDNNYQQIIQDMDSKQNITXXXXXXXXHIEEVQADEINNTEENEPLN 354
+ T NN Q I DM+ N T ++ TE++ P N
Sbjct: 329 ------DTATGASSNN--QTISDMNDDSNTTTTTTTTLAAVDSSNGTVSQTTEDDAPAN 379
>12_01_0631 - 5234452-5234468,5234536-5234839,5234926-5235810
Length = 401
Score = 28.7 bits (61), Expect = 1.4
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 1 GTRKKNKDSFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRK 123
G K +DN++ ++K + S NK PK+ R+K
Sbjct: 338 GQTGSRKRKLVLDNDEGDDDNKSGDKGSPNKLPKRTMPRKK 378
>08_02_1029 - 23768228-23768548,23768635-23769519
Length = 401
Score = 28.7 bits (61), Expect = 1.4
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 1 GTRKKNKDSFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRK 123
G K +DN++ ++K + S NK PK+ R+K
Sbjct: 338 GQTGSRKRKLVLDNDEGDDDNKSGDKGSPNKLPKRTMPRKK 378
>07_01_1077 -
9687394-9687515,9696615-9696733,9696815-9697104,
9697191-9698075
Length = 471
Score = 28.7 bits (61), Expect = 1.4
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 1 GTRKKNKDSFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRK 123
G K +DN++ ++K + S NK PK+ R+K
Sbjct: 338 GQTGSRKRKLVLDNDEGDDDNKSGDKGSPNKLPKRTMPRKK 378
>05_04_0117 + 18136189-18137073,18137160-18137516
Length = 413
Score = 28.7 bits (61), Expect = 1.4
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 1 GTRKKNKDSFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRK 123
G K +DN++ ++K + S NK PK+ R+K
Sbjct: 338 GQTGSRKRKLVLDNDEGDDDNKSGDKGSPNKLPKRTMPRKK 378
>04_04_0285 -
24136865-24137000,24137554-24137611,24138142-24141480,
24141789-24142218,24142861-24142928,24143015-24143165
Length = 1393
Score = 28.7 bits (61), Expect = 1.4
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +1
Query: 22 DSFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVA--NDVNLNTTSELVNQKNI 195
D+ ++ NN + TE+ D+ NK+ K +QR+K + +V ND + + E VNQ I
Sbjct: 795 DNTSVSNNIS-TENVVVQDDDKNKATK--RQRKKISLKHVPTDNDKTIQSLDEQVNQVAI 851
Query: 196 NHVTST 213
+ +
Sbjct: 852 EDLNGS 857
>08_02_1571 -
27935756-27935950,27936048-27936199,27936294-27936403,
27936845-27937050,27937212-27937295,27937367-27937525,
27937621-27937728,27938103-27938278,27938376-27938462,
27938546-27938657,27938737-27938817,27938890-27938943,
27939107-27939183,27939262-27939331,27939552-27939666,
27939840-27939937,27940041-27940179,27940267-27940868,
27941270-27941399,27941471-27941529
Length = 937
Score = 28.3 bits (60), Expect = 1.9
Identities = 18/82 (21%), Positives = 33/82 (40%)
Frame = +1
Query: 97 PKKMKQRRKSPIDNVANDVNLNTTSELVNQKNINHVTSTIDNNYQQIIQDMDSKQNITXX 276
PK Q+ ++ +A+ + TTS NQK IN + D+ Q D+ K T
Sbjct: 418 PKDRYQQEENERKAMADQIEQMTTSLEANQKQINDLQEKYDSELQH-SADLSKKLEATEK 476
Query: 277 XXXXXXHIEEVQADEINNTEEN 342
++ +++ + N
Sbjct: 477 CLDHTSNLLSTTKEDLKQAQYN 498
>05_01_0476 - 3896314-3898725
Length = 803
Score = 28.3 bits (60), Expect = 1.9
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = +1
Query: 16 NKDSFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTS-ELVNQKN 192
N+D+ D NQT K ND + S + + N +NTTS L N N
Sbjct: 90 NRDNPVTDLQLNQTRLKLSNDGNLVISSNASTIWSSATVANTTIATTMNTTSVVLANNGN 149
Query: 193 INHVTSTIDNN 225
+ + S+ +N
Sbjct: 150 LMIIGSSSTSN 160
>12_01_0404 +
3200787-3200898,3201016-3201091,3201442-3201544,
3202109-3202160,3202239-3202333,3202703-3202768,
3202910-3203419,3203598-3203756,3204022-3204321,
3204867-3205193,3205548-3205754,3205978-3206076,
3206193-3206251,3206294-3206639
Length = 836
Score = 27.9 bits (59), Expect = 2.5
Identities = 12/41 (29%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +2
Query: 182 IRRI*IMLPQPLTIIINKSYKIWIL-NKILPKRKVKNVSIL 301
IR + +LP+ L + +NKSY ++ +K++ + +K++ L
Sbjct: 412 IREVASLLPECLDLCLNKSYNTYLASSKLVNEGNIKHIDFL 452
>08_02_0746 +
20721421-20721649,20722912-20722971,20723318-20723377,
20723458-20723553,20723764-20723871,20724037-20724090,
20724275-20724414,20724499-20724570,20724642-20724692,
20724943-20725017,20725205-20725585,20726372-20727604,
20727679-20727831
Length = 903
Score = 27.9 bits (59), Expect = 2.5
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 4/112 (3%)
Frame = +1
Query: 4 TRKKNKDSFTIDNNKNQTESKCDNDNSTNKSPK--KMKQRRKSPIDNVANDVNLNTTSEL 177
+R K K T + + N +T K + K+K+ +K+P+ V +S+
Sbjct: 31 SRGKKKSKTTFEQKVEIHTKETQNLENTKKKQEEGKIKRNKKAPVQGVIQKDKECKSSKE 90
Query: 178 VNQKNINHVTSTIDNNYQQIIQDMDS--KQNITXXXXXXXXHIEEVQADEIN 327
+ KNI + + I++ +S K++ I + EIN
Sbjct: 91 IEGKNIGGIQKEKQSKSSMEIEEKESDIKKHFKALTEMDTEIISQSNLTEIN 142
>06_03_1346 +
29480482-29480676,29480754-29481067,29481164-29481236,
29481517-29481627,29481725-29481899,29481992-29482119,
29482310-29482370,29482893-29482963
Length = 375
Score = 27.9 bits (59), Expect = 2.5
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +1
Query: 1 GTRKKNKDSFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVAN 147
G K+ + NNK + ES+ D D+ + + K +R K +VA+
Sbjct: 69 GDEKEKQLGDDAKNNKRKQESESDGDSGSGEEQNKRVRRAKGKEKDVAS 117
>03_06_0517 +
34466743-34466879,34468478-34468588,34468997-34469079,
34469287-34469404,34469503-34469714,34470167-34470651,
34470731-34470801,34470898-34470955,34471161-34471192,
34471193-34471449,34471820-34471974,34472353-34472636,
34472725-34472842,34473574-34473756,34473848-34474162
Length = 872
Score = 27.5 bits (58), Expect = 3.3
Identities = 19/117 (16%), Positives = 48/117 (41%), Gaps = 8/117 (6%)
Frame = +1
Query: 19 KDSFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTSELVNQKNI- 195
+D ++ + +++S+ ND++T ++ P+++ N +++N N
Sbjct: 206 QDKPVVNESSKESQSRSTNDSTTRGVDSMKHASKEEPVESKPNSTRGQENMDVLNNLNST 265
Query: 196 -----NHVTSTIDN--NYQQIIQDMDSKQNITXXXXXXXXHIEEVQADEINNTEENE 345
+ +++T +N + Q+ + D K N +A + N+E E
Sbjct: 266 DAGNNSSLSTTTENASHVQRRLLQTDEKSNQAGSSETDASDTGTAKAATVENSEPLE 322
>02_04_0624 + 24538095-24538183,24538429-24538612,24538725-24538886,
24538988-24539225,24539301-24539370,24539439-24539530,
24539799-24539836,24540018-24540039,24540462-24540618,
24540702-24540753,24542144-24542207,24542279-24542362,
24543418-24543543,24543622-24543818,24543903-24544091,
24544186-24544434,24544507-24544556,24544977-24545059,
24545164-24545449,24545751-24545794,24545878-24546626
Length = 1074
Score = 27.5 bits (58), Expect = 3.3
Identities = 19/72 (26%), Positives = 37/72 (51%)
Frame = +1
Query: 40 NNKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTSELVNQKNINHVTSTID 219
+ K++ ++ NST + KK ++ K+P +N + V +S ++K+ ++ T D
Sbjct: 943 SQKSEILNRTQGKNSTQLAGKKAFEKSKTPDENSLHFVGKRDSS---SEKS-KALSKTPD 998
Query: 220 NNYQQIIQDMDS 255
N Q + MDS
Sbjct: 999 ENSLQFLGKMDS 1010
>08_02_1242 -
25513665-25513997,25514184-25514257,25514317-25514422,
25514507-25514557,25514629-25514700,25514785-25514924,
25515109-25515162,25515328-25515435,25515652-25515747,
25515828-25515887,25516234-25516293,25517581-25517809
Length = 460
Score = 27.1 bits (57), Expect = 4.3
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 4/112 (3%)
Frame = +1
Query: 4 TRKKNKDSFTIDNNKNQTESKCDNDNSTNKSPK--KMKQRRKSPIDNVANDVNLNTTSEL 177
+R K K T + + N +T K + K+K+ +K+P+ V +S+
Sbjct: 31 SRGKKKSKTTSEQKVEIHTKETQNLENTKKKQEEGKIKRNKKAPVQGVIQKDKECKSSKE 90
Query: 178 VNQKNINHVTSTIDNNYQQIIQDMDS--KQNITXXXXXXXXHIEEVQADEIN 327
+ KNI + + I++ +S K++ I + EIN
Sbjct: 91 IEGKNIGGIQKEKQSKSSMEIEEKESDIKKHFKALTEMDTEIISQSNLTEIN 142
>06_03_1500 +
30602846-30603185,30603244-30603323,30603477-30603566,
30603677-30603909,30604126-30604204,30604320-30604464,
30604815-30604877,30605343-30605374,30605475-30605516,
30605599-30605712
Length = 405
Score = 27.1 bits (57), Expect = 4.3
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +1
Query: 13 KNKDSFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTSELVNQKN 192
+N ++ + K + CD S NK PK+ SP + +D++ + S+L ++ N
Sbjct: 169 QNDEAVADSDFKGGAGASCDEAVSINKPPKETTTGSLSP--KIESDIDSSEDSDLKDEDN 226
>03_04_0204 -
18444903-18445054,18445445-18445676,18445765-18445836,
18446201-18446347,18446559-18446614,18446727-18446832,
18446938-18447025,18447112-18447230,18448975-18449580,
18449803-18449898,18450232-18450422,18453287-18453416,
18453531-18453566
Length = 676
Score = 27.1 bits (57), Expect = 4.3
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 58 ESKCDNDNSTNKSPKKMKQRRKSP 129
+SKCD D S+ P M R SP
Sbjct: 588 KSKCDGDGSSGSMPGNMLPRTSSP 611
>01_06_1142 + 34856497-34856698,34857852-34858402
Length = 250
Score = 27.1 bits (57), Expect = 4.3
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 7 RKKNKDSFTIDNNKNQTESKCDNDNSTNKSPK 102
R K K + + NN ++E++ D ++ T+K PK
Sbjct: 147 RSKRKQA-ALPNNNAESEAEADEESPTDKKPK 177
>05_07_0274 -
28873531-28873644,28873727-28873981,28874111-28874179,
28874277-28874415,28874511-28875076,28875225-28875326,
28875425-28875491,28875576-28876072,28876148-28876212,
28876470-28876567,28876652-28876694,28876870-28876963,
28877325-28877360,28877454-28877542,28877667-28877788,
28878193-28878404
Length = 855
Score = 26.6 bits (56), Expect = 5.7
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +1
Query: 19 KDSFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRKSPIDN 138
K+ N ESK + +NS N K+ ++ RK +N
Sbjct: 741 KEKAATAENSESPESKKEKENSENPESKEKEKERKENSEN 780
>03_06_0769 +
36134298-36134356,36134740-36134919,36134975-36135007,
36135008-36135128,36135227-36135266,36135811-36135863,
36135937-36135998,36136354-36136506,36136949-36137160,
36137480-36138972,36140560-36141483,36141734-36142043,
36143818-36143874,36144114-36144167,36144452-36144510
Length = 1269
Score = 26.6 bits (56), Expect = 5.7
Identities = 12/50 (24%), Positives = 26/50 (52%)
Frame = +1
Query: 16 NKDSFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNT 165
+KDS T+D+ Q+ S+ ++ + K + +K P V ++N+ +
Sbjct: 378 SKDSETLDDESGQSGSEIESSHGHKLHKKGKRSGKKKPSVVVIRNINVTS 427
>02_05_0473 +
29319824-29322511,29322659-29322820,29324133-29324249,
29324360-29324469,29324504-29324540,29324696-29324862,
29325002-29325089,29325163-29325270
Length = 1158
Score = 26.6 bits (56), Expect = 5.7
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +1
Query: 25 SFTIDNNKNQTESKCDNDNSTNKSPK----KMKQRRKSPIDNVANDVNLNTTSELVNQKN 192
S + N N + C +D ++ + K++ RR + +D NLNT SE N+ N
Sbjct: 23 SHPVGNAGNFEQHNCYDDPGMDQQARIKHSKLEVRRGEAHFSQEDDANLNTLSEDPNKSN 82
Query: 193 INHVT 207
+ ++
Sbjct: 83 LPSIS 87
>10_08_0231 - 16045293-16045309,16045377-16045677,16045764-16046648
Length = 400
Score = 26.2 bits (55), Expect = 7.6
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 1 GTRKKNKDSFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRK 123
G K +DN++ ++K ++ S NK PK+ R+K
Sbjct: 338 GQTGSRKRKLVLDNDEGD-DNKSEDKGSPNKPPKRTMPRKK 377
>10_06_0187 - 11598240-11599508
Length = 422
Score = 26.2 bits (55), Expect = 7.6
Identities = 18/74 (24%), Positives = 30/74 (40%)
Frame = +1
Query: 37 DNNKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTSELVNQKNINHVTSTI 216
D +K Q + + T S K R K+P A + SE+ Q+N+ +
Sbjct: 64 DPDKIQAADQLVIEELTKLSELKHAYREKNPKPVAATPQDARLLSEIQEQQNLLKTYEVM 123
Query: 217 DNNYQQIIQDMDSK 258
+Q IQ D++
Sbjct: 124 VKKFQSQIQTRDTE 137
>06_01_0026 +
265755-265968,267319-267468,267694-267738,267786-268460,
268779-268843,268854-269073,269163-269438,269547-269663,
269776-269853,269930-270184,270235-270323,270403-270816
Length = 865
Score = 26.2 bits (55), Expect = 7.6
Identities = 23/105 (21%), Positives = 36/105 (34%), Gaps = 1/105 (0%)
Frame = +1
Query: 10 KKNKDSFTIDNNKNQTESKCD-NDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTSELVNQ 186
KK K T + + E++ + N TN++ +SP + N T + N
Sbjct: 159 KKEKAHETSSSKGKELETQENANSQETNENSNNSSLENRSPSNGSHEVCNSGETVTVANG 218
Query: 187 KNINHVTSTIDNNYQQIIQDMDSKQNITXXXXXXXXHIEEVQADE 321
K V + ID N + S H E + DE
Sbjct: 219 KAGLKVITIIDKNQNGLANSNGSLHIANVSMNKTSVHEIEAEKDE 263
>05_05_0267 -
23704249-23704401,23704476-23704780,23704967-23705674,
23707772-23708114,23708300-23708374,23708625-23708675,
23708747-23708818,23708903-23709042,23709227-23709280,
23709446-23709553,23709769-23709864,23709946-23710005,
23710352-23710411,23711699-23711927
Length = 817
Score = 26.2 bits (55), Expect = 7.6
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 4/112 (3%)
Frame = +1
Query: 4 TRKKNKDSFTIDNNKNQTESKCDNDNSTNKSPK--KMKQRRKSPIDNVANDVNLNTTSEL 177
+R K K T + + N +T K + K+K+ +K+P+ V +S+
Sbjct: 31 SRGKKKSKTTSEQKVEIHTKETQNLANTKKKQEEGKIKRNKKAPVQGVIQKDKECKSSKE 90
Query: 178 VNQKNINHVTSTIDNNYQQIIQDMDS--KQNITXXXXXXXXHIEEVQADEIN 327
+ KNI + + I++ +S K++ I + EIN
Sbjct: 91 IEGKNIGGIQKEKQSKSSMEIEEKESDIKKHFKALTEMDTEIISQSNLTEIN 142
>03_06_0448 - 34005581-34005655,34005735-34005830,34006669-34007616,
34007684-34007851,34007908-34008099,34008164-34008346,
34008414-34008590,34008667-34012074
Length = 1748
Score = 26.2 bits (55), Expect = 7.6
Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Frame = +1
Query: 70 DNDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTSELVNQKNINHVTSTID--NNYQQIIQ 243
+ +NS + + + + + A + NLN +E V++K I ST+D ++ ++
Sbjct: 1299 NEENSIKEMQNQEIRSTEEASEFQAGETNLNNGAENVDEKRILEDASTLDIRDSTNAVVN 1358
Query: 244 DMDSKQNITXXXXXXXXHIEEVQADEINNTEENEPLN 354
+S + EVQ + T ENE N
Sbjct: 1359 GAESTEGTQILCAFNTEKELEVQEKQDQGT-ENENRN 1394
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.300 0.119 0.313
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,195,906
Number of Sequences: 37544
Number of extensions: 82252
Number of successful extensions: 184
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 183
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 542368620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.7 bits)
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