Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_N08
(356 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83113-1|CAB05543.1| 733|Caenorhabditis elegans Hypothetical pr... 33 0.059
AF016513-1|AAB69446.1| 733|Caenorhabditis elegans Ce-LEA protein. 33 0.059
U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical p... 33 0.078
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 31 0.18
AL117200-6|CAB55058.1| 209|Caenorhabditis elegans Hypothetical ... 31 0.31
AF043703-7|AAY55881.1| 84|Caenorhabditis elegans Hypothetical ... 31 0.31
Z71186-8|CAA94917.2| 1322|Caenorhabditis elegans Hypothetical pr... 29 0.72
U64858-5|AAB18284.1| 409|Caenorhabditis elegans Hypothetical pr... 29 0.72
AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical ... 29 0.72
AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical ... 29 0.95
AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical ... 29 0.95
Z70287-8|CAA94301.2| 1717|Caenorhabditis elegans Hypothetical pr... 29 1.3
U55364-5|AAQ23124.1| 368|Caenorhabditis elegans Prion-like-(q/n... 29 1.3
U55364-4|AAA97972.1| 382|Caenorhabditis elegans Prion-like-(q/n... 29 1.3
Z81109-4|CAB03250.1| 91|Caenorhabditis elegans Hypothetical pr... 28 1.7
Z92849-4|CAB07431.2| 169|Caenorhabditis elegans Hypothetical pr... 28 2.2
AL117195-4|CAB55010.1| 571|Caenorhabditis elegans Hypothetical ... 28 2.2
Z78017-2|CAD44160.1| 615|Caenorhabditis elegans Hypothetical pr... 27 2.9
Z73976-10|CAD44151.1| 615|Caenorhabditis elegans Hypothetical p... 27 2.9
Z70680-2|CAA94573.1| 424|Caenorhabditis elegans Hypothetical pr... 27 2.9
U13070-21|AAC46647.1| 133|Caenorhabditis elegans Hypothetical p... 27 2.9
AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical ... 27 2.9
AF025451-2|AAK68202.1| 612|Caenorhabditis elegans Hypothetical ... 27 2.9
AF025451-1|AAB71201.1| 610|Caenorhabditis elegans Hypothetical ... 27 2.9
AF003136-3|AAO38651.1| 352|Caenorhabditis elegans Hypothetical ... 27 2.9
AF003136-2|AAK93851.1| 468|Caenorhabditis elegans Hypothetical ... 27 2.9
Z81114-3|CAB03289.1| 664|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical p... 27 3.9
Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical pr... 27 3.9
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p... 27 5.1
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ... 27 5.1
AF036702-13|AAB88379.2| 648|Caenorhabditis elegans Hypothetical... 27 5.1
Z81475-8|CAL90887.1| 676|Caenorhabditis elegans Hypothetical pr... 26 8.9
Z81475-7|CAB03914.2| 653|Caenorhabditis elegans Hypothetical pr... 26 8.9
Z75533-1|CAA99815.1| 423|Caenorhabditis elegans Hypothetical pr... 26 8.9
Z68118-3|CAA92190.2| 280|Caenorhabditis elegans Hypothetical pr... 26 8.9
Z49068-5|CAA88863.2| 707|Caenorhabditis elegans Hypothetical pr... 26 8.9
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 26 8.9
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 26 8.9
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 26 8.9
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 26 8.9
>Z83113-1|CAB05543.1| 733|Caenorhabditis elegans Hypothetical
protein K08H10.1 protein.
Length = 733
Score = 33.1 bits (72), Expect = 0.059
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = +1
Query: 19 KDSFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVN--LNTTSELVNQ-- 186
KDS T DN E+ DN S +S + R K P N A++ N T E ++
Sbjct: 106 KDSITGDNAHKTGEALNDNYESVKESASEAADRLKEPAQNTADNAKDLANQTGEEMSDAF 165
Query: 187 KNINHVTSTIDNNYQQIIQD 246
+++ +TS N ++ D
Sbjct: 166 ESVKQLTSDTAENAKENAHD 185
>AF016513-1|AAB69446.1| 733|Caenorhabditis elegans Ce-LEA protein.
Length = 733
Score = 33.1 bits (72), Expect = 0.059
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = +1
Query: 19 KDSFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVN--LNTTSELVNQ-- 186
KDS T DN E+ DN S +S + R K P N A++ N T E ++
Sbjct: 106 KDSITGDNAHKTGEALNDNYESVKESASEAADRLKEPAQNTADNAKDLANQTGEEMSDAF 165
Query: 187 KNINHVTSTIDNNYQQIIQD 246
+++ +TS N ++ D
Sbjct: 166 ESVKQLTSDTAENAKENAHD 185
>U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical
protein C33G8.3 protein.
Length = 142
Score = 32.7 bits (71), Expect = 0.078
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 7 RKKNKDSFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRKS 126
+KKNKDS ++ K + K D+ + + + KK K +RK+
Sbjct: 103 KKKNKDSEEEEDKKKDKKKKNDSSDESEEENKKRKNKRKN 142
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 31.5 bits (68), Expect = 0.18
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 10 KKNKDSFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRKSPIDN 138
+KN D D K++ + K DND + KK K ++K D+
Sbjct: 169 EKNDDDDEEDKKKDKKKKKDDNDEEEKEKDKKKKDKKKDDDDD 211
>AL117200-6|CAB55058.1| 209|Caenorhabditis elegans Hypothetical
protein Y50E8A.10 protein.
Length = 209
Score = 30.7 bits (66), Expect = 0.31
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 7 RKKNKDSFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRKS 126
+K++KDS N KN+ + D+ +K K K+ +KS
Sbjct: 68 KKRSKDSSKKSNKKNKKKKSADSSMKISKKSSKSKKSKKS 107
>AF043703-7|AAY55881.1| 84|Caenorhabditis elegans Hypothetical
protein W10C8.6 protein.
Length = 84
Score = 30.7 bits (66), Expect = 0.31
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = -1
Query: 335 SVLFISSACTSSICLRFLLF-FLVI--FCLESISCMI 234
+V F S CTS +CL LL+ FL+I +C + C I
Sbjct: 33 AVFFKSRGCTSQVCLNILLYIFLIIPAYCHATWYCFI 69
>Z71186-8|CAA94917.2| 1322|Caenorhabditis elegans Hypothetical
protein F23D12.2 protein.
Length = 1322
Score = 29.5 bits (63), Expect = 0.72
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +1
Query: 49 NQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTSELVNQKNINHVTSTIDNNY 228
N+ KC D ++ KM+Q + P + +AND + + +Q+ + TS +
Sbjct: 198 NKLMRKCKKDAENQRTLAKMEQSLQPPSNFLANDYLVRESERAAHQQEASSSTSQFSLDG 257
Query: 229 QQII 240
+II
Sbjct: 258 TKII 261
>U64858-5|AAB18284.1| 409|Caenorhabditis elegans Hypothetical
protein C16D9.4 protein.
Length = 409
Score = 29.5 bits (63), Expect = 0.72
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 130 IDNVANDVNLNTTSELVNQKNINHVTSTIDNNYQQIIQDMDS 255
+DN V+ +T E+ KNI V++T DN+Y+Q + S
Sbjct: 142 VDNPGPFVDFKSTDEI--SKNIVFVSATSDNHYEQATNSISS 181
>AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical
protein W09G12.7 protein.
Length = 368
Score = 29.5 bits (63), Expect = 0.72
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 7 RKKNKDSFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRKSP 129
+KK K + + + S +D+S ++ PKK K++ K P
Sbjct: 159 KKKKKSKKSKNKGSSSDSSDSSDDSSDDEKPKKKKKKSKKP 199
>AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical
protein Y47D3B.5b protein.
Length = 1136
Score = 29.1 bits (62), Expect = 0.95
Identities = 13/73 (17%), Positives = 32/73 (43%)
Frame = +1
Query: 43 NKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTSELVNQKNINHVTSTIDN 222
+++ S +++ + P+KM R SP+ D N + E + + ++I
Sbjct: 787 HRSTVTSPVGREDAETEMPQKMMDRMVSPVSTAIRDQNTSPVEEQTPDFDDRSIQTSISE 846
Query: 223 NYQQIIQDMDSKQ 261
+ ++++ D Q
Sbjct: 847 WFGKLLKKKDESQ 859
>AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical
protein Y47D3B.5a protein.
Length = 1088
Score = 29.1 bits (62), Expect = 0.95
Identities = 13/73 (17%), Positives = 32/73 (43%)
Frame = +1
Query: 43 NKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTSELVNQKNINHVTSTIDN 222
+++ S +++ + P+KM R SP+ D N + E + + ++I
Sbjct: 787 HRSTVTSPVGREDAETEMPQKMMDRMVSPVSTAIRDQNTSPVEEQTPDFDDRSIQTSISE 846
Query: 223 NYQQIIQDMDSKQ 261
+ ++++ D Q
Sbjct: 847 WFGKLLKKKDESQ 859
>Z70287-8|CAA94301.2| 1717|Caenorhabditis elegans Hypothetical
protein R09E10.7 protein.
Length = 1717
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 43 NKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVN 156
N + TES ++D K+P++++ RK +D+V DVN
Sbjct: 661 NNDSTESGQESD--VQKTPQRVEIPRKKKVDSVEMDVN 696
>U55364-5|AAQ23124.1| 368|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 31,
isoform b protein.
Length = 368
Score = 28.7 bits (61), Expect = 1.3
Identities = 23/88 (26%), Positives = 34/88 (38%)
Frame = +1
Query: 1 GTRKKNKDSFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTSELV 180
G + S T+ N T + N+ Q ++ + N N +TTS +
Sbjct: 33 GAQYDQYGSSTLQYNNGATAQPIQYNQ--NQQYGSTAQYNQNQMQNQQNSNQYSTTSNMN 90
Query: 181 NQKNINHVTSTIDNNYQQIIQDMDSKQN 264
NQ+N N NNY Q D+ QN
Sbjct: 91 NQQNSNQYQQGQQNNYGTQAQ-YDAGQN 117
>U55364-4|AAA97972.1| 382|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 31,
isoform a protein.
Length = 382
Score = 28.7 bits (61), Expect = 1.3
Identities = 23/88 (26%), Positives = 34/88 (38%)
Frame = +1
Query: 1 GTRKKNKDSFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTSELV 180
G + S T+ N T + N+ Q ++ + N N +TTS +
Sbjct: 47 GAQYDQYGSSTLQYNNGATAQPIQYNQ--NQQYGSTAQYNQNQMQNQQNSNQYSTTSNMN 104
Query: 181 NQKNINHVTSTIDNNYQQIIQDMDSKQN 264
NQ+N N NNY Q D+ QN
Sbjct: 105 NQQNSNQYQQGQQNNYGTQAQ-YDAGQN 131
>Z81109-4|CAB03250.1| 91|Caenorhabditis elegans Hypothetical
protein R10D12.6 protein.
Length = 91
Score = 28.3 bits (60), Expect = 1.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 335 SVLFISSACTSSICLRFLLFFLVI 264
+V F S CT +CL LL+F +I
Sbjct: 40 AVYFKSRGCTKHVCLNVLLYFFLI 63
>Z92849-4|CAB07431.2| 169|Caenorhabditis elegans Hypothetical
protein H12D21.5 protein.
Length = 169
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +1
Query: 1 GTRKKNKDSFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDV 153
GT+K K+ +KN +K ++ N P + KQ++ +NV + +
Sbjct: 116 GTKKGLKNQKKGKKSKNSNNTKSTDNTGDNAQPDEQKQQKLESKENVPDQL 166
>AL117195-4|CAB55010.1| 571|Caenorhabditis elegans Hypothetical
protein Y57A10A.5 protein.
Length = 571
Score = 27.9 bits (59), Expect = 2.2
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Frame = +1
Query: 22 DSFTIDNNKNQTESKCDNDNS------TNKSPKKMKQRRKSPIDNVANDVNLNTTSELVN 183
D F ID+++N E+ D+DN +S + Q + PID + N S +N
Sbjct: 332 DDFHIDHSQNYEETMVDDDNQPIPEDPPYESDEVEGQPKPEPIDFEFDQTNNRDVSHSLN 391
Query: 184 QKNINHVTSTIDNN 225
N+ + NN
Sbjct: 392 INNLRE-NGEVSNN 404
>Z78017-2|CAD44160.1| 615|Caenorhabditis elegans Hypothetical
protein T07C12.12 protein.
Length = 615
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 25 SFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRKSPID 135
S + K+ TE N TN+SPKK R P+D
Sbjct: 332 SSLLSKMKDDTEDFDLNRRMTNRSPKKRNSIRSPPMD 368
>Z73976-10|CAD44151.1| 615|Caenorhabditis elegans Hypothetical
protein T07C12.12 protein.
Length = 615
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 25 SFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRKSPID 135
S + K+ TE N TN+SPKK R P+D
Sbjct: 332 SSLLSKMKDDTEDFDLNRRMTNRSPKKRNSIRSPPMD 368
>Z70680-2|CAA94573.1| 424|Caenorhabditis elegans Hypothetical
protein C25G4.4 protein.
Length = 424
Score = 27.5 bits (58), Expect = 2.9
Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +1
Query: 10 KKNKDSFTID--NNKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTSELVN 183
+ + ++ TID + N+ KC + N N +++ Q RKS + A + +E+
Sbjct: 141 RTHMEAMTIDFYEHMNRCSGKCQSRNYVNAPSEEVLQARKSKRTSEAGQLKYEIENEMAG 200
Query: 184 QKNIN 198
++ N
Sbjct: 201 KEADN 205
>U13070-21|AAC46647.1| 133|Caenorhabditis elegans Hypothetical
protein F01F1.14 protein.
Length = 133
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 25 SFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRKS 126
SF + +K + + KC+N +NK+PKKM S
Sbjct: 6 SFHLFKSKKKYK-KCENSPESNKNPKKMSTSSNS 38
>AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical
protein F52G3.1 protein.
Length = 1172
Score = 27.5 bits (58), Expect = 2.9
Identities = 21/115 (18%), Positives = 49/115 (42%), Gaps = 2/115 (1%)
Frame = +1
Query: 4 TRKKNKDSF--TIDNNKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTSEL 177
+ ++ KDS + ++ + K N +S K +K+K+ N+ + N+N S
Sbjct: 557 SHRERKDSHRSNVSSHHSDDAKKHMNGHSKKKETEKLKENGDVKKFNIEDCSNVNIESWA 616
Query: 178 VNQKNINHVTSTIDNNYQQIIQDMDSKQNITXXXXXXXXHIEEVQADEINNTEEN 342
+N++ N+ ++ + + KQN+ H + ++ + E+N
Sbjct: 617 DEMENMDGFEEV--NSKKKKNKTLAEKQNVQQSKSQLQNHTQNQSQNQSQDHEKN 669
>AF025451-2|AAK68202.1| 612|Caenorhabditis elegans Hypothetical
protein C24H12.5b protein.
Length = 612
Score = 27.5 bits (58), Expect = 2.9
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +1
Query: 34 IDNNKNQTES--KCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTSELVNQ 186
I+N++N ES K D D+ N+SP K+ + + I V + EL +Q
Sbjct: 413 IENSENSDESPLKKDQDSDENESPMKLANQWLNEIGVSPRTVKNTVSRELSSQ 465
>AF025451-1|AAB71201.1| 610|Caenorhabditis elegans Hypothetical
protein C24H12.5a protein.
Length = 610
Score = 27.5 bits (58), Expect = 2.9
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +1
Query: 34 IDNNKNQTES--KCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTSELVNQ 186
I+N++N ES K D D+ N+SP K+ + + I V + EL +Q
Sbjct: 411 IENSENSDESPLKKDQDSDENESPMKLANQWLNEIGVSPRTVKNTVSRELSSQ 463
>AF003136-3|AAO38651.1| 352|Caenorhabditis elegans Hypothetical
protein F28B3.5b protein.
Length = 352
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/60 (23%), Positives = 32/60 (53%)
Frame = +1
Query: 34 IDNNKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTSELVNQKNINHVTST 213
I NN+ + + + D + K +K K+ + + +NV N ++L T ++++Q+ + T
Sbjct: 198 ITNNRQEDKEQGDREVLIEKEQEKEKEHQLTFHENVQNSIHL--TKQILSQRQFLAIVIT 255
>AF003136-2|AAK93851.1| 468|Caenorhabditis elegans Hypothetical
protein F28B3.5a protein.
Length = 468
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/60 (23%), Positives = 32/60 (53%)
Frame = +1
Query: 34 IDNNKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTSELVNQKNINHVTST 213
I NN+ + + + D + K +K K+ + + +NV N ++L T ++++Q+ + T
Sbjct: 198 ITNNRQEDKEQGDREVLIEKEQEKEKEHQLTFHENVQNSIHL--TKQILSQRQFLAIVIT 255
>Z81114-3|CAB03289.1| 664|Caenorhabditis elegans Hypothetical
protein T04D3.3 protein.
Length = 664
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = +1
Query: 46 KNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTSELVNQKN 192
+NQ E +DN K P RK DN +L +++Q N
Sbjct: 113 RNQKEKSNSDDNCQEKEPTSPSSSRKKSYDNAPALESLEKLRYILHQLN 161
>Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical
protein ZK1251.9 protein.
Length = 1701
Score = 27.1 bits (57), Expect = 3.9
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +1
Query: 49 NQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTSE 174
N T D +N+ N+ ++ QRR+ +++ ND L + E
Sbjct: 1453 NDTLDDLDFENAQNRIIRRQAQRRRQRLNSSENDAELPGSDE 1494
>Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical protein
ZK1251.9 protein.
Length = 1701
Score = 27.1 bits (57), Expect = 3.9
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +1
Query: 49 NQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTSE 174
N T D +N+ N+ ++ QRR+ +++ ND L + E
Sbjct: 1453 NDTLDDLDFENAQNRIIRRQAQRRRQRLNSSENDAELPGSDE 1494
>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
protein 2, isoform b protein.
Length = 2027
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 37 DNNKNQTESKCDNDNSTNKSPKKMKQRRKSP 129
D+N +QTE DN + SP+ R SP
Sbjct: 1717 DHNPHQTEHLLAQDNRSPSSPRYRSMARASP 1747
>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
activated calciumchannel alpha-1 subunit protein.
Length = 2027
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 37 DNNKNQTESKCDNDNSTNKSPKKMKQRRKSP 129
D+N +QTE DN + SP+ R SP
Sbjct: 1717 DHNPHQTEHLLAQDNRSPSSPRYRSMARASP 1747
>AF036702-13|AAB88379.2| 648|Caenorhabditis elegans Hypothetical
protein F33D4.6b protein.
Length = 648
Score = 26.6 bits (56), Expect = 5.1
Identities = 16/94 (17%), Positives = 38/94 (40%)
Frame = +1
Query: 37 DNNKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTSELVNQKNINHVTSTI 216
+N K + + + + +T + PKK ++ RKS + + +L +++ V ++
Sbjct: 380 ENEKVEEKPVEEEEEATTEPPKKKRKMRKSHKTSKKEKKEIRKFPDLYDEQWKTQVAPSV 439
Query: 217 DNNYQQIIQDMDSKQNITXXXXXXXXHIEEVQAD 318
++ + D + +EVQ D
Sbjct: 440 SPPSEEFAEQFDGVDEVQESPKRQETTQQEVQND 473
>Z81475-8|CAL90887.1| 676|Caenorhabditis elegans Hypothetical
protein C24H11.8b protein.
Length = 676
Score = 25.8 bits (54), Expect = 8.9
Identities = 19/91 (20%), Positives = 38/91 (41%), Gaps = 6/91 (6%)
Frame = +1
Query: 4 TRKKNKDSFTIDN------NKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNT 165
TRK +D + N +S D T+ S + +K P N N
Sbjct: 375 TRKPRRDDAAVPNVIISRTRDEDVKSDPDKTEETSMSLTDDEDMQKPPRRN--NSARELR 432
Query: 166 TSELVNQKNINHVTSTIDNNYQQIIQDMDSK 258
E++ ++NH ++D++ + ++D+D +
Sbjct: 433 EKEMMMMNSLNHKQPSMDSSTSRRLRDIDGR 463
>Z81475-7|CAB03914.2| 653|Caenorhabditis elegans Hypothetical
protein C24H11.8a protein.
Length = 653
Score = 25.8 bits (54), Expect = 8.9
Identities = 19/91 (20%), Positives = 38/91 (41%), Gaps = 6/91 (6%)
Frame = +1
Query: 4 TRKKNKDSFTIDN------NKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNT 165
TRK +D + N +S D T+ S + +K P N N
Sbjct: 375 TRKPRRDDAAVPNVIISRTRDEDVKSDPDKTEETSMSLTDDEDMQKPPRRN--NSARELR 432
Query: 166 TSELVNQKNINHVTSTIDNNYQQIIQDMDSK 258
E++ ++NH ++D++ + ++D+D +
Sbjct: 433 EKEMMMMNSLNHKQPSMDSSTSRRLRDIDGR 463
>Z75533-1|CAA99815.1| 423|Caenorhabditis elegans Hypothetical
protein C54G4.2 protein.
Length = 423
Score = 25.8 bits (54), Expect = 8.9
Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 4/90 (4%)
Frame = +1
Query: 46 KNQTESKCDNDNSTNKSPKKMK----QRRKSPIDNVANDVNLNTTSELVNQKNINHVTST 213
K ESK S KSP+K + Q+++ + + TS+L++ +H
Sbjct: 33 KKVVESKKRRPKSKTKSPEKEEKKRDQKKRKSASITPSTESTMKTSDLISSIG-DHTEGE 91
Query: 214 IDNNYQQIIQDMDSKQNITXXXXXXXXHIE 303
N + + + KQN T +IE
Sbjct: 92 PSNGNTKFVSHLHKKQNSTEEDKKVPENIE 121
>Z68118-3|CAA92190.2| 280|Caenorhabditis elegans Hypothetical
protein R01E6.3a protein.
Length = 280
Score = 25.8 bits (54), Expect = 8.9
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 58 ESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTSELVNQKNINH 201
++K + +NK KK +R+SPID V V +T + NI++
Sbjct: 31 KAKSKSAKKSNKKFKKAAAQRQSPIDIVPQHVCCDTDVCKADALNIDY 78
>Z49068-5|CAA88863.2| 707|Caenorhabditis elegans Hypothetical
protein K01C8.5 protein.
Length = 707
Score = 25.8 bits (54), Expect = 8.9
Identities = 21/93 (22%), Positives = 38/93 (40%), Gaps = 6/93 (6%)
Frame = +1
Query: 4 TRKKNKDSFTIDNNKNQTESKC---DNDNSTNKSPKKMKQRRKSPIDNVANDVNLN---T 165
T+++ I +NKN+TES+ + +S + +K R S + + LN
Sbjct: 282 TKRRRSQKTPIQHNKNRTESRLHQKEKSSSDEEVHEKSTSSRHSNVSRSSKSPYLNDDRA 341
Query: 166 TSELVNQKNINHVTSTIDNNYQQIIQDMDSKQN 264
S + +H T + Q ++D D N
Sbjct: 342 PSRGSKCTSSHHSTPKLLTPSPQYLKDSDDDDN 374
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/61 (19%), Positives = 28/61 (45%)
Frame = +1
Query: 7 RKKNKDSFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTSELVNQ 186
++K+ + + K+ T+ + + S + PK ++ SP+ ++V T E +
Sbjct: 1740 KEKSPEKSAAEEVKSPTKKEKSPEKSAEEKPKSPTKKESSPVKMADDEVKSPTKKEKSPE 1799
Query: 187 K 189
K
Sbjct: 1800 K 1800
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/61 (19%), Positives = 28/61 (45%)
Frame = +1
Query: 7 RKKNKDSFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTSELVNQ 186
++K+ + + K+ T+ + + S + PK ++ SP+ ++V T E +
Sbjct: 1740 KEKSPEKSAAEEVKSPTKKEKSPEKSAEEKPKSPTKKESSPVKMADDEVKSPTKKEKSPE 1799
Query: 187 K 189
K
Sbjct: 1800 K 1800
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/61 (19%), Positives = 28/61 (45%)
Frame = +1
Query: 7 RKKNKDSFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTSELVNQ 186
++K+ + + K+ T+ + + S + PK ++ SP+ ++V T E +
Sbjct: 1740 KEKSPEKSAAEEVKSPTKKEKSPEKSAEEKPKSPTKKESSPVKMADDEVKSPTKKEKSPE 1799
Query: 187 K 189
K
Sbjct: 1800 K 1800
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/61 (19%), Positives = 28/61 (45%)
Frame = +1
Query: 7 RKKNKDSFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTSELVNQ 186
++K+ + + K+ T+ + + S + PK ++ SP+ ++V T E +
Sbjct: 1740 KEKSPEKSAAEEVKSPTKKEKSPEKSAEEKPKSPTKKESSPVKMADDEVKSPTKKEKSPE 1799
Query: 187 K 189
K
Sbjct: 1800 K 1800
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.300 0.119 0.313
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,180,100
Number of Sequences: 27780
Number of extensions: 95003
Number of successful extensions: 402
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 401
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.7 bits)
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