Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_N08
(356 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 33 8e-04
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 24 0.47
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 24 0.62
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 23 1.1
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 1.1
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 1.9
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 22 1.9
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 3.3
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 3.3
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 21 4.4
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 21 4.4
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 21 4.4
DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein ... 21 5.8
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 5.8
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 21 5.8
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 21 5.8
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 20 7.6
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 33.5 bits (73), Expect = 8e-04
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +1
Query: 40 NNKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTSELVNQKNINHVTSTID 219
+N+N +N N+ N++ K R++ DN ND N + N++N N
Sbjct: 433 DNQNADNQNANNQNADNQNANKQNGNRQN--DNRQNDNKQNGNRQNDNKQNGNRQNDNKQ 490
Query: 220 N-NYQQIIQDMDSKQN 264
N N Q + D+KQN
Sbjct: 491 NGNRQNGNKQNDNKQN 506
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 24.2 bits (50), Expect = 0.47
Identities = 13/71 (18%), Positives = 30/71 (42%)
Frame = +1
Query: 40 NNKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTSELVNQKNINHVTSTID 219
N KN +S + + + + + ID ND+++N + + +N + +
Sbjct: 399 NVKNTLDSYNGSMEINQNIAQNIDHAKNTIIDYRNNDLSINEEKRTIENEQLNRMYKSYP 458
Query: 220 NNYQQIIQDMD 252
N + +DM+
Sbjct: 459 NYIDKETKDMN 469
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 23.8 bits (49), Expect = 0.62
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 133 DNVANDVNLNTTSELVNQKNINHVTSTIDNN 225
DN+ N N N ++ N+KN N+ + N+
Sbjct: 421 DNIQNTNNQNDNNQKNNKKNANNQKNNNQND 451
Score = 23.4 bits (48), Expect = 0.82
Identities = 11/41 (26%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 19 KDSFTIDNNKNQTESKCDNDNSTN-KSPKKMKQRRKSPIDN 138
+++ ++NN+N +N N N K+ KK +K+ N
Sbjct: 410 RNTHCVNNNQNDNIQNTNNQNDNNQKNNKKNANNQKNNNQN 450
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 23.0 bits (47), Expect = 1.1
Identities = 10/48 (20%), Positives = 25/48 (52%)
Frame = +1
Query: 4 TRKKNKDSFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVAN 147
++KK D + ++K+ +++ ST +++ R SP+ ++ N
Sbjct: 338 SKKKESDDKKVISSKSGSKANSPFPGSTEADIIELQDLRMSPLPSIRN 385
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.0 bits (47), Expect = 1.1
Identities = 17/85 (20%), Positives = 36/85 (42%)
Frame = +1
Query: 13 KNKDSFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTSELVNQKN 192
KN+ + +++ S+ + ++ PK + I N N N N + N N
Sbjct: 284 KNEREYRKYRERSKERSRDRTERERSREPKIISSLSNKTIHNNNNYNNNNYNNNYNNYNN 343
Query: 193 INHVTSTIDNNYQQIIQDMDSKQNI 267
N+ NNY+++ ++ + + I
Sbjct: 344 NNY------NNYKKLYYNIINIEQI 362
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 22.2 bits (45), Expect = 1.9
Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 1/73 (1%)
Frame = +1
Query: 13 KNKDSFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTSELVNQKN 192
KN+ + +++ S+ + ++ PK + I N N N N + N N
Sbjct: 51 KNERKYRKYRERSKERSRDRTERERSREPKIISSLSNKTIHNNNNYNNNNYNNYNYNNNN 110
Query: 193 INHVTSTIDN-NY 228
N+ N NY
Sbjct: 111 YNNYKKLYYNINY 123
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 22.2 bits (45), Expect = 1.9
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +1
Query: 37 DNNKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNL 159
+N++ E+ D N+ S ++ +QR + +D+ VNL
Sbjct: 468 ENSRRAMENLGDGRNNKEDS-EEFRQRLRKELDSKTGGVNL 507
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.4 bits (43), Expect = 3.3
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 323 ISSACTSSICLRFLLFF 273
+ S S CL FL+FF
Sbjct: 445 LDSYAVSGFCLLFLMFF 461
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.4 bits (43), Expect = 3.3
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 323 ISSACTSSICLRFLLFF 273
+ S S CL FL+FF
Sbjct: 498 LDSYAVSGFCLLFLMFF 514
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.0 bits (42), Expect = 4.4
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +1
Query: 16 NKDSFTIDNNKNQTESKCDNDNSTN 90
N+D+ ++N NQ +DN N
Sbjct: 419 NQDNNHYNHNHNQARHSSKSDNQNN 443
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.0 bits (42), Expect = 4.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 10 KKNKDSFTIDNNKNQTESKCDNDNSTNK 93
K+ K ++ NN S +NDN+ NK
Sbjct: 77 KERKIISSLSNNYISNISNYNNDNNYNK 104
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 21.0 bits (42), Expect = 4.4
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +1
Query: 34 IDNNKNQTESKCDN 75
IDN+ +TESK +N
Sbjct: 274 IDNSAQKTESKTNN 287
>DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein 5
protein.
Length = 104
Score = 20.6 bits (41), Expect = 5.8
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Frame = +2
Query: 185 RRI*IMLPQPLTIIINK--SYKIWILNKILPKRKVKNVS----ILRKYKLMK 322
++I +LP+ L N+ S +I I N ++P + ILR+YK+MK
Sbjct: 51 KKIKELLPEVLNNHCNRCTSRQIGIANTLIPFMQQNYPYEWQLILRRYKIMK 102
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 5.8
Identities = 11/47 (23%), Positives = 22/47 (46%)
Frame = +1
Query: 7 RKKNKDSFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVAN 147
R+++K+ I NN + + + N+N N + +K N+ N
Sbjct: 73 RERSKEPKIISNNNSLSNNYNYNNNYNNYNNNYNTNYKKLQYYNIIN 119
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 5.8
Identities = 13/64 (20%), Positives = 26/64 (40%)
Frame = +1
Query: 13 KNKDSFTIDNNKNQTESKCDNDNSTNKSPKKMKQRRKSPIDNVANDVNLNTTSELVNQKN 192
KN+ + +++ S+ + ++ PK + I N N N N + N
Sbjct: 51 KNERKYRKYRERSKERSRDRTERERSREPKIISSLSNKTIHNNNNYNNNNYNNYKKLYYN 110
Query: 193 INHV 204
IN++
Sbjct: 111 INYI 114
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 20.6 bits (41), Expect = 5.8
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +2
Query: 245 IWILNKILPKR 277
+W +NKI+P R
Sbjct: 405 LWFINKIIPIR 415
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 20.2 bits (40), Expect = 7.6
Identities = 6/22 (27%), Positives = 12/22 (54%)
Frame = +1
Query: 34 IDNNKNQTESKCDNDNSTNKSP 99
+ + + E + +DN + KSP
Sbjct: 241 LQKKRTRAEGRLSSDNMSKKSP 262
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.300 0.119 0.313
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,469
Number of Sequences: 438
Number of extensions: 1375
Number of successful extensions: 20
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8308335
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.0 bits)
- SilkBase 1999-2023 -