Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_N07
(541 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|S... 266 1e-72
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 167 1e-42
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 163 1e-41
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 158 4e-40
SPCC1682.16 |rpt4||19S proteasome regulatory subunit Rpt4|Schizo... 154 9e-39
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 132 3e-32
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 120 1e-28
SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 104 7e-24
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 95 6e-21
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 95 8e-21
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 89 3e-19
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 85 5e-18
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 81 8e-17
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 81 1e-16
SPAC1834.11c |sec18||secretory pathway protein Sec18 |Schizosacc... 78 7e-16
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 71 1e-13
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 56 3e-09
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 44 2e-05
SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogam... 31 0.082
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 29 0.44
SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux transporte... 29 0.58
SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharo... 28 1.0
SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase |Schizo... 27 1.8
SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase Ubp7|Schizosa... 26 4.1
SPAC16E8.07c |vph1||V-type ATPase subunit a|Schizosaccharomyces ... 25 5.4
SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr... 25 5.4
SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyce... 25 7.2
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 25 7.2
SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual 25 7.2
SPAC926.02 |||conserved fungal protein|Schizosaccharomyces pombe... 25 9.5
SPAC26F1.13c |||leucine-tRNA ligase |Schizosaccharomyces pombe|c... 25 9.5
>SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit
Rpt6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 266 bits (653), Expect = 1e-72
Identities = 134/178 (75%), Positives = 145/178 (81%), Gaps = 1/178 (0%)
Frame = +3
Query: 9 GSRMVRELFVMAREHAPSIIFMXXXXXXXXXXXXXXXXXXXX-VQRTMLELLNQLDGFEA 185
GSRMVRELFVMAREHAPSIIFM VQRTMLELLNQLDGFEA
Sbjct: 223 GSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEA 282
Query: 186 TKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLR 365
TKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPP+ EAR +IL+IHSR MNLTRGI+L+
Sbjct: 283 TKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLK 342
Query: 366 KIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKK 539
IAE M GASGAE+KGVCTEAGM+ALRERRVHVTQEDFE+AVAKV+ K MS++K
Sbjct: 343 SIAEKMNGASGAELKGVCTEAGMFALRERRVHVTQEDFELAVAKVLNKGDSGEMSLQK 400
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 167 bits (405), Expect = 1e-42
Identities = 84/171 (49%), Positives = 110/171 (64%), Gaps = 1/171 (0%)
Frame = +3
Query: 9 GSRMVRELFVMAREHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEAT 188
G R+VR+LF A EH+PSI+F+ +QRTMLELLNQLDGF+ +
Sbjct: 269 GPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQSGAEREIQRTMLELLNQLDGFDTS 328
Query: 189 -KNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLR 365
++IKVIMATNRI LDPAL+RPGRIDRKI F P+E + I IH+ KMNL +NL
Sbjct: 329 QRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDEATKRKIFTIHTSKMNLGEDVNLE 388
Query: 366 KIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSE 518
++ + SGAE+K + +EAG+ ALRERR+ V +DF A KV++ E
Sbjct: 389 ELIQCKDDLSGAEIKAIVSEAGLLALRERRMRVVMDDFRQAREKVLKTKDE 439
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 163 bits (396), Expect = 1e-41
Identities = 81/170 (47%), Positives = 108/170 (63%)
Frame = +3
Query: 9 GSRMVRELFVMAREHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEAT 188
G+++VR+ F +A+E +P+IIF+ VQRTMLELLNQLDGF +
Sbjct: 263 GAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSD 322
Query: 189 KNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRK 368
+KVI ATNR+D LDPALLR GR+DRK+EFP PNEEAR+ IL+IHSRKM + IN +
Sbjct: 323 DRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEE 382
Query: 369 IAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSE 518
+A +GA +K VC EAGM ALR+ + E F + +V + S+
Sbjct: 383 LARSTDEYNGAMLKSVCVEAGMIALRQGDTKINHEHFMDGILEVQMRKSK 432
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 158 bits (384), Expect = 4e-40
Identities = 83/166 (50%), Positives = 105/166 (63%)
Frame = +3
Query: 9 GSRMVRELFVMAREHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEAT 188
G+RMVRELF MAR IIF VQRTMLEL+ QLDGF+
Sbjct: 257 GARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPR 316
Query: 189 KNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRK 368
NIKV+ ATNR + LD AL+RPGRIDRK+EF P+ E R IL+IH++ M + + I
Sbjct: 317 GNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWEL 376
Query: 369 IAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQ 506
IA L P +GAE++ VCTEAGM+A+R RR T++DF AV KV++
Sbjct: 377 IARLCPSQTGAELRSVCTEAGMFAIRARRRVATEKDFLDAVQKVVK 422
>SPCC1682.16 |rpt4||19S proteasome regulatory subunit
Rpt4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 388
Score = 154 bits (373), Expect = 9e-39
Identities = 75/163 (46%), Positives = 102/163 (62%)
Frame = +3
Query: 12 SRMVRELFVMAREHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATK 191
+R++RE+F A+EH P +IFM +QRT++ELLNQ+DGF+
Sbjct: 211 ARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDYLG 270
Query: 192 NIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKI 371
K+IMATNR D LDPALLRPGR+DRKIE P PNE R++ILKIH K++ I+ +
Sbjct: 271 QTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYEAL 330
Query: 372 AELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKV 500
+L G +GA+++ V TEAG A++E R +V Q D A KV
Sbjct: 331 VKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSDLMSAARKV 373
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 132 bits (319), Expect = 3e-32
Identities = 71/178 (39%), Positives = 103/178 (57%), Gaps = 1/178 (0%)
Frame = +3
Query: 9 GSRMVRELFVMAREHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEAT 188
G RMVR++F MARE+AP+IIF+ VQR ++ELL Q+DGF+
Sbjct: 212 GPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQTGADREVQRILIELLTQMDGFDQG 271
Query: 189 KNIKVIMATNRIDILDPALLRPGRIDRKIEFPP-PNEEARLDILKIHSRKMNLTRGINLR 365
N+KVIMATNR D LDPALLRPGR+DRKIEFP + R + + + KM L+ ++L
Sbjct: 272 ANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYRDRRQRRLVFQTITAKMLLSPEVDLD 331
Query: 366 KIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKK 539
+SGA++ + +AG+ A+R+ R + Q D E A A+ ++ + + K
Sbjct: 332 TFIMRPDASSGAQIAAIMQDAGLLAVRKSRGVILQSDIEEAYARAVKPTDMEQFAFYK 389
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 120 bits (290), Expect = 1e-28
Identities = 63/145 (43%), Positives = 85/145 (58%)
Frame = +3
Query: 15 RMVRELFVMAREHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATKN 194
R VR++F AR+ +PS+IF R + LLN+LDG EA +N
Sbjct: 628 RAVRQVFQKARQASPSVIFFDEIDALTANRGEDNSS-----DRVVAALLNELDGIEALRN 682
Query: 195 IKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIA 374
+ V+ ATNR D++DPAL+RPGR+DR + PPN EAR I+KI + KM ++L IA
Sbjct: 683 VLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQIVKIQAEKMKFAEDVDLDLIA 742
Query: 375 ELMPGASGAEVKGVCTEAGMYALRE 449
E G SGAEV +C EAG+ A+ E
Sbjct: 743 EKTEGCSGAEVVALCQEAGLIAMHE 767
Score = 73.7 bits (173), Expect = 2e-14
Identities = 51/165 (30%), Positives = 80/165 (48%), Gaps = 1/165 (0%)
Frame = +3
Query: 21 VRELFVMAREHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATKNIK 200
+R++F AR H PSIIF+ T+L LL DG +
Sbjct: 361 LRKIFEDARAHQPSIIFIDEIDALAPKRTEDVSEAESRAVATLLTLL---DGMANAGKVV 417
Query: 201 VIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILK-IHSRKMNLTRGINLRKIAE 377
VI ATNR + +D AL RPGR++++IE P++ ARLDI+K + S N L +A
Sbjct: 418 VIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIKLLLSGVPNEINDAQLEDLAS 477
Query: 378 LMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKD 512
GA++ V EA + A++ R + + ++ + + +Q D
Sbjct: 478 RTHAYVGADLAAVVREAALRAIK-RTISLQKDTSGLDIFGAVQMD 521
>SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 104 bits (250), Expect = 7e-24
Identities = 59/167 (35%), Positives = 88/167 (52%), Gaps = 3/167 (1%)
Frame = +3
Query: 9 GSRMVRELFVMAREHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTML-ELLNQLDGFEA 185
G VR+LF AR++AP IIF+ + + L +LL ++DGF +
Sbjct: 373 GPSRVRDLFATARKNAPCIIFIDEIDAIGKARGRGGQFGSNDERESTLNQLLVEMDGFTS 432
Query: 186 TKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINL- 362
+++I V TNR D+LDPALLRPGR DR+I P+ R I K+H + + I+L
Sbjct: 433 SEHIVVFAGTNRPDVLDPALLRPGRFDRQITIDRPDIGGREQIFKVHLKHIKAADNIDLI 492
Query: 363 -RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKV 500
+++A L G +GA++ VC E + A R V FE A+ +V
Sbjct: 493 AKRLAVLTSGFTGADIMNVCNEGALIAARSNSNEVQMVHFEQAIERV 539
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 95.1 bits (226), Expect = 6e-21
Identities = 60/179 (33%), Positives = 92/179 (51%), Gaps = 4/179 (2%)
Frame = +3
Query: 9 GSRMVRELFVMAREHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEAT 188
G++ VRELF AR+ APSIIF+ +++T+ +LL LDGF
Sbjct: 344 GAKRVRELFAAARKQAPSIIFIDELDAIGQKRNARDAAH---MRQTLNQLLVDLDGFSKN 400
Query: 189 KNIK----VIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGI 356
+++ I ATN + LDPAL RPGR DR I P P+ RL IL H+R + L + +
Sbjct: 401 EDLAHPVVFIGATNFPESLDPALTRPGRFDRHIHVPLPDVRGRLAILLQHTRHVPLGKDV 460
Query: 357 NLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSI 533
+L IA G +GA++ + +A +YA + V+ D E + +++ K+ I
Sbjct: 461 DLSIIARGTSGFAGADLANLINQAAVYASKNLSTAVSMRDLEWSKDRILMGAERKSAFI 519
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 94.7 bits (225), Expect = 8e-21
Identities = 51/143 (35%), Positives = 79/143 (55%)
Frame = +3
Query: 21 VRELFVMAREHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATKNIK 200
VR++F AR AP ++F+ R + +LL ++DG + KN+
Sbjct: 579 VRDIFDKARAAAPCVVFLDELDSIAKARGASAGDSGGG-DRVVNQLLTEMDGVNSKKNVF 637
Query: 201 VIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAEL 380
VI ATNR D +DPAL+RPGR+D+ I P P+EEAR IL+ R + ++LR +A+
Sbjct: 638 VIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDLRAVAKA 697
Query: 381 MPGASGAEVKGVCTEAGMYALRE 449
G SGA+++ V A A+++
Sbjct: 698 THGFSGADLEFVVQRAVKLAIKD 720
Score = 91.1 bits (216), Expect = 1e-19
Identities = 49/155 (31%), Positives = 87/155 (56%)
Frame = +3
Query: 21 VRELFVMAREHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATKNIK 200
+R+ F A +++P+IIF+ +R + +LL +DG +A N+
Sbjct: 306 LRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVE---RRVVSQLLTLMDGMKARSNVV 362
Query: 201 VIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAEL 380
V+ ATNR + +DPAL R GR DR+++ P+ RL+IL+IH++ M L ++L +IA
Sbjct: 363 VMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEILRIHTKNMKLADDVDLEQIAAE 422
Query: 381 MPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEM 485
G G+++ +C+EA M +RE+ + ++ E+
Sbjct: 423 THGYVGSDLASLCSEAAMQQIREKMDMIDLDEDEI 457
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 89.4 bits (212), Expect = 3e-19
Identities = 56/145 (38%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Frame = +3
Query: 15 RMVRELFVMAREHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATKN 194
R +R LF AR PSIIF + T+L L+ DG +
Sbjct: 457 RQLRLLFEEARRVQPSIIFFDEIDGLAPIRSSKQEQTHSSIVSTLLALM---DGLDTRGQ 513
Query: 195 IKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMN-LTRGINLRKI 371
+ VI ATNR + LDPAL RPGR DR+ FP PN++AR+ IL+I+S + L +
Sbjct: 514 VVVIGATNRPNDLDPALRRPGRFDREFYFPLPNKQARMKILEINSLHFSPKIPESYLLHL 573
Query: 372 AELMPGASGAEVKGVCTEAGMYALR 446
AE G GA++K +CTEA + A+R
Sbjct: 574 AESTSGYGGADLKALCTEAALNAVR 598
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 85.4 bits (202), Expect = 5e-18
Identities = 51/145 (35%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Frame = +3
Query: 15 RMVRELFVMAREHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATKN 194
R +R LF A+ PSIIF + T+L L+ DG E+
Sbjct: 351 RQLRLLFEEAKSTQPSIIFFDEIDGLAPVRSSKQEQIHASIVSTLLALM---DGMESRGQ 407
Query: 195 IKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINL-RKI 371
+ +I ATNR D +DPAL RPGR DR+ FP P+ +AR I++IH+R + L +
Sbjct: 408 VIIIGATNRPDAVDPALRRPGRFDREFYFPLPDRDARKKIIEIHTRNWDPPVPEWLCSML 467
Query: 372 AELMPGASGAEVKGVCTEAGMYALR 446
AE G GA+++ +CTEA + +++
Sbjct: 468 AEKSKGYGGADLRALCTEAALNSIK 492
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 779
Score = 81.4 bits (192), Expect = 8e-17
Identities = 50/146 (34%), Positives = 74/146 (50%), Gaps = 2/146 (1%)
Frame = +3
Query: 15 RMVRELFVMAREHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATKN 194
R VR++F+ AR +P +IF V T LL +LDG
Sbjct: 572 RAVRQVFLRARASSPCVIFFDELDAMVPRRDDSLSEASSRVVNT---LLTELDGLSDRSG 628
Query: 195 IKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIA 374
+ VI ATNR DI+DPA+LRPGR+D+ + P+ R++ILK +++ L +NL +
Sbjct: 629 VYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQTPLHEEVNLDVLG 688
Query: 375 --ELMPGASGAEVKGVCTEAGMYALR 446
E SGA++ + EA + ALR
Sbjct: 689 RDERCSNFSGADLAALVREAAVTALR 714
Score = 75.8 bits (178), Expect = 4e-15
Identities = 47/146 (32%), Positives = 77/146 (52%), Gaps = 2/146 (1%)
Frame = +3
Query: 15 RMVRELFVMAREHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEAT-- 188
+ VRE+F A+ AP ++F+ + L +++L FE T
Sbjct: 254 KKVREVFEEAKSLAPCLMFIDEIDAVTPKRESAQREMERRIVAQFLTCMDELS-FEKTDG 312
Query: 189 KNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRK 368
K + VI ATNR D LD AL R GR DR+I P+++AR IL+ ++ + L+ + R+
Sbjct: 313 KPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDAREKILRTMAKGLKLSGDFDFRQ 372
Query: 369 IAELMPGASGAEVKGVCTEAGMYALR 446
+A+ PG GA++K + AG+ A++
Sbjct: 373 LAKQTPGYVGADLKALTAAAGIIAIK 398
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 80.6 bits (190), Expect = 1e-16
Identities = 48/175 (27%), Positives = 90/175 (51%), Gaps = 4/175 (2%)
Frame = +3
Query: 21 VRELFVMAREHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATKNIK 200
VR+LF A+ P ++F R + ++L Q+DG E+ +
Sbjct: 688 VRDLFSRAQMAKPCVLFFDEFDSVAPRRGQDSTGVT---DRVVNQILTQMDGAESLDGVY 744
Query: 201 VIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAEL 380
++ AT R D++DPALLRPGR+D+ I PNEE RL++L+ + + ++ L+K++ L
Sbjct: 745 IVAATTRPDMIDPALLRPGRLDKLIFCDLPNEEERLEVLQKLANRFHIENAAMLKKLSTL 804
Query: 381 MPGASGAEVKGVCTEAGMYALRE--RRVHVTQEDFEMAVAKV--MQKDSEKNMSI 533
G + A++ + +A + A+ + +RV + D + + +S++N S+
Sbjct: 805 TDGYTYADLSSLLYDAHLIAVHKLLKRVSINAVDPSQTTSSFTNLTTESKRNASM 859
>SPAC1834.11c |sec18||secretory pathway protein Sec18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 792
Score = 78.2 bits (184), Expect = 7e-16
Identities = 41/100 (41%), Positives = 61/100 (61%), Gaps = 4/100 (4%)
Frame = +3
Query: 153 ELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSR 332
+LL ++DG + NI VI TNR D++D ALLRPGR++ +E P+E RL ILKIH+
Sbjct: 404 QLLAKMDGVDQLNNILVIGMTNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQILKIHTS 463
Query: 333 KMN----LTRGINLRKIAELMPGASGAEVKGVCTEAGMYA 440
+M L +++ ++A L SGAE+ G+ A +A
Sbjct: 464 RMASNGILENDVDMEELASLTKNFSGAEIAGLIKSASSFA 503
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 70.9 bits (166), Expect = 1e-13
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 4/148 (2%)
Frame = +3
Query: 21 VRELFVMAREHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEATKN-- 194
VR +F AR +P +IF + R + +LL +LD N
Sbjct: 736 VRNVFEKARNSSPCVIFFDELDSIAPHRGNSSDSGNV-MDRVVSQLLAELDSISKDNNKY 794
Query: 195 IKVIMATNRIDILDPALLRPGRIDRKIEFP-PPNEEARLDILKIHSRKMNLTRGINLRKI 371
+ VI ATNR D+LDP+LLRPGR D+ + +EE++ +L+ ++ L I+L +I
Sbjct: 795 VFVIGATNRPDLLDPSLLRPGRFDKLVYLGINKSEESKASMLRALTKTFKLDETIDLNEI 854
Query: 372 AE-LMPGASGAEVKGVCTEAGMYALRER 452
A+ P +GA++ +C++A + A++ +
Sbjct: 855 AKNCHPNFTGADMYALCSDAVLSAIKRK 882
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 56.4 bits (130), Expect = 3e-09
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 2/151 (1%)
Frame = +3
Query: 15 RMVRELFVMAREHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGF-EATK 191
R+VR+LF MARE PSIIF+ +R E L Q++G +
Sbjct: 208 RLVRQLFEMAREQKPSIIFIDEIDSLCGSRSEGESESS---RRIKTEFLVQMNGVGKDES 264
Query: 192 NIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKM-NLTRGINLRK 368
+ V+ ATN LD A+ R R +++I P PN AR + +++ K+ + + ++
Sbjct: 265 GVLVLGATNIPWTLDSAIRR--RFEKRIYIPLPNAHARARMFELNVGKIPSELTSQDFKE 322
Query: 369 IAELMPGASGAEVKGVCTEAGMYALRERRVH 461
+A++ G SG+++ V +A M + RR+H
Sbjct: 323 LAKMTDGYSGSDISIVVRDAIMEPV--RRIH 351
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 43.6 bits (98), Expect = 2e-05
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +3
Query: 144 TMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRK 272
T LLN LDG ++ + M TN + LDPAL+RPGR+D K
Sbjct: 323 TFSGLLNALDGVTSSDERIIFMTTNHPEKLDPALVRPGRVDVK 365
>SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogamy
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 31.5 bits (68), Expect = 0.082
Identities = 10/45 (22%), Positives = 25/45 (55%)
Frame = -1
Query: 532 MDIFFSESFCMTLATAISKSSWVTCTLLSRRAYIPASVQTPFTSA 398
+ I F +C + + ++ W+TCT+ ++I +++T + +A
Sbjct: 407 LSIIFIHIYCFKITSWVNLYGWITCTIARTLSFIKLNIRTFYLTA 451
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 29.1 bits (62), Expect = 0.44
Identities = 37/157 (23%), Positives = 62/157 (39%), Gaps = 13/157 (8%)
Frame = +3
Query: 15 RMVRELFVMAREHAPSIIFMXXXXXXXXXXXXXXXXXXXXVQRTMLELLNQLDGFEAT-- 188
++VR LF +A++ +PSIIF+ +R E L Q
Sbjct: 538 KLVRALFTLAKKLSPSIIFVDEIDSLLSARSSDGNEHETS-RRIKTEFLIQWSSLARAAA 596
Query: 189 -------KNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARL----DILKIHSRK 335
+ V+ ATN +D A R R R+ P P+E R ++LK
Sbjct: 597 SRQTADHPRVLVLAATNLPWCIDDAARR--RFVRRTYIPLPDETTRRLHLNNLLKYQKHS 654
Query: 336 MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR 446
++L ++ I + SG+++ + +A M LR
Sbjct: 655 LSLE---DIEAIVKATEYYSGSDLTALAKDAAMGPLR 688
>SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 531
Score = 28.7 bits (61), Expect = 0.58
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -3
Query: 299 FLIWWRELNLPVNTTRPQ*--SRIKDINPVCCHNNFNIFCSFKTI*LIEQFQHSSL 138
F +W E N+ V P S+ +N VC N FN FCSF + + F ++L
Sbjct: 268 FAFYWVEKNIAVEPIAPVEILSQPTPLN-VCLGNFFNAFCSFVIVYELPLFFETTL 322
>SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1183
Score = 27.9 bits (59), Expect = 1.0
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +3
Query: 165 QLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNL 344
Q+ G + + + N+ID D ++R R+ RK++ + E D ++I RK
Sbjct: 323 QILGADVGEKSHDVAPDNKIDNPDADMVRAQRMPRKLKMREEDVEPTADDIEIKGRKTTY 382
Query: 345 T 347
T
Sbjct: 383 T 383
>SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 27.1 bits (57), Expect = 1.8
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 150 LELLNQLDGFEATKNIKVIMATNRIDILD-PALLRPGRIDRKIEFPPPNEEARL 308
L+ ++L + KN V +ID++ P + PG IDR + PP A++
Sbjct: 395 LQTCSRLVNIDIRKNGVVSFENRQIDVIALPISIDPGFIDRCLASPPVEHWAKV 448
>SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase
Ubp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 875
Score = 25.8 bits (54), Expect = 4.1
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 533 DGHILLRILLHDFGYCHFKIFLGNMYSSFTKSIHTSLC 420
D H LLR+LL D F++ N+ +S ++S+ S C
Sbjct: 303 DAHELLRLLLDDLISEEFRVLRFNL-NSVSRSLQLSPC 339
>SPAC16E8.07c |vph1||V-type ATPase subunit a|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 805
Score = 25.4 bits (53), Expect = 5.4
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -1
Query: 409 FTSAPDAPGINSAI--LRKLIPLVRFIFLEWILRMSSRASSF 290
F S +P +N+ + + +IP V+F FLE IL + R + F
Sbjct: 160 FDSEETSPQMNTTLDFVSGIIPTVKFQFLERILWRTLRGNLF 201
>SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 904
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 162 NQLDGFEATKNIKVIMATNR-IDILDPALLRPGRIDRKIE 278
+ L+G E + + + R I + DP+++ P +I KIE
Sbjct: 22 SMLEGVEGIEQFTISLLLERAIAVHDPSIISPDQIAEKIE 61
>SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 413
Score = 25.0 bits (52), Expect = 7.2
Identities = 9/37 (24%), Positives = 20/37 (54%)
Frame = -3
Query: 482 FKIFLGNMYSSFTKSIHTSLCADSLYLCTRRTRHQLG 372
F + + +++F S+H + S+Y+ ++T H G
Sbjct: 206 FLVSKNDAFTTFVHSVHNTPMQQSMYVPQQQTSHSSG 242
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 25.0 bits (52), Expect = 7.2
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 135 VQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 236
VQRT+ E N I +M +NRI +LD
Sbjct: 1399 VQRTIRERFNDRTILTIAHRINTVMDSNRILVLD 1432
>SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1489
Score = 25.0 bits (52), Expect = 7.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 273 IEFPPPNEEARLDILKIHSRKMNLT 347
+EF + AR DILK+H R + T
Sbjct: 238 LEFSKKDASARSDILKMHRRTKSAT 262
>SPAC926.02 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 443
Score = 24.6 bits (51), Expect = 9.5
Identities = 21/95 (22%), Positives = 43/95 (45%)
Frame = +3
Query: 153 ELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSR 332
+LL + D FE I ++ T ++DIL + R + NE A +D+L++
Sbjct: 214 KLLEESD-FEKLCQI-MLPITEKLDILKLMDWYLAKTKRLVLGGKENEVAWIDLLQVFDH 271
Query: 333 KMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMY 437
+++ +NL+ + ++ +C +A Y
Sbjct: 272 QLSQLPQLNLQNPLDPNSSVKPLHIQLLCDKADAY 306
>SPAC26F1.13c |||leucine-tRNA ligase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1111
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -3
Query: 452 SFTKSIHTSLCADSLYLCTRRTRHQLGY 369
+ T I+ S + L++CTRR + + Y
Sbjct: 337 NITYGIYESNVPNELFICTRRAANNMAY 364
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,308,276
Number of Sequences: 5004
Number of extensions: 46328
Number of successful extensions: 174
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 162
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 221892220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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