Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_N06
         (488 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021213-1|AAX33361.1|  177|Drosophila melanogaster RH72463p pro...   166   1e-41
Y10017-1|CAA71124.1|  166|Drosophila melanogaster ribosomal prot...   165   4e-41
Y10015-2|CAA71121.1|  166|Drosophila melanogaster ribosomal prot...   165   4e-41
Y09766-1|CAA70905.1|  166|Drosophila melanogaster ribosomal prot...   165   4e-41
AE014296-1484|AAF50393.1|  166|Drosophila melanogaster CG6253-PA...   165   4e-41
BT016128-1|AAV37013.1|  167|Drosophila melanogaster GM06787p pro...   160   8e-40
AE014134-600|AAF51111.1|  181|Drosophila melanogaster CG31952-PA...    32   0.48 
BT021278-1|AAX33426.1|  934|Drosophila melanogaster RE42943p pro...    28   7.9  
AY118377-1|AAM48406.1| 1265|Drosophila melanogaster RE24170p pro...    28   7.9  
AF082097-1|AAC78847.1|  934|Drosophila melanogaster C1-THF synth...    28   7.9  
AE014297-1172|AAN13479.1|  934|Drosophila melanogaster CG4067-PC...    28   7.9  
AE014297-1171|AAN13478.1|  934|Drosophila melanogaster CG4067-PA...    28   7.9  
AE014297-1168|AAX52944.1|  968|Drosophila melanogaster CG4067-PD...    28   7.9  
AE014297-1167|AAG22140.2|  968|Drosophila melanogaster CG4067-PB...    28   7.9  
AE014296-2323|AAF49788.1| 1265|Drosophila melanogaster CG9206-PA...    28   7.9  

>BT021213-1|AAX33361.1|  177|Drosophila melanogaster RH72463p
           protein.
          Length = 177

 Score =  166 bits (404), Expect = 1e-41
 Identities = 74/139 (53%), Positives = 100/139 (71%)
 Frame = +1

Query: 34  VMPFARYVEPWRVALVSDGPLKGKLVGVVDIIDQTRALIDGPGSGVSRQQIRLNQLHLTK 213
           VMPF R+V+  R+A  S GPLKG+LV +VD+IDQ R L+DGP +GV RQ+ RLN LHLTK
Sbjct: 11  VMPFERFVQTGRIAKASAGPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTK 70

Query: 214 FRLKYPFTAPTRVVRKAWTDAQLNEKWAKSQWAQKLANKEKRAQMTDYDRFKLTSARVKR 393
           +R+K+P+TAPTR+VRKAWT++ L  +W  S W+ K  N  KR+ + D+DRFKL  A+ +R
Sbjct: 71  YRIKFPYTAPTRIVRKAWTESDLKAQWKVSPWSVKAQNICKRSSLNDFDRFKLRYAKRQR 130

Query: 394 NRARTAVFKSLKVKAARAG 450
           N+  T  F +LK +    G
Sbjct: 131 NKLLTIAFNTLKKRTKADG 149


>Y10017-1|CAA71124.1|  166|Drosophila melanogaster ribosomal protein
           L14 protein.
          Length = 166

 Score =  165 bits (400), Expect = 4e-41
 Identities = 73/138 (52%), Positives = 99/138 (71%)
 Frame = +1

Query: 37  MPFARYVEPWRVALVSDGPLKGKLVGVVDIIDQTRALIDGPGSGVSRQQIRLNQLHLTKF 216
           MPF R+V+  R+A  S GPLKG+LV +VD+IDQ R L+DGP +GV RQ+ RLN LHLTK+
Sbjct: 1   MPFERFVQTGRIAKASAGPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKY 60

Query: 217 RLKYPFTAPTRVVRKAWTDAQLNEKWAKSQWAQKLANKEKRAQMTDYDRFKLTSARVKRN 396
           R+K+P+TAPTR+VRKAWT++ L  +W  S W+ K  N  KR+ + D+DRFKL  A+ +RN
Sbjct: 61  RIKFPYTAPTRIVRKAWTESDLKAQWKVSPWSVKAQNICKRSSLNDFDRFKLRYAKRQRN 120

Query: 397 RARTAVFKSLKVKAARAG 450
           +  T  F +LK +    G
Sbjct: 121 KLLTIAFNTLKKRTKADG 138


>Y10015-2|CAA71121.1|  166|Drosophila melanogaster ribosomal protein
           L14 protein.
          Length = 166

 Score =  165 bits (400), Expect = 4e-41
 Identities = 73/138 (52%), Positives = 99/138 (71%)
 Frame = +1

Query: 37  MPFARYVEPWRVALVSDGPLKGKLVGVVDIIDQTRALIDGPGSGVSRQQIRLNQLHLTKF 216
           MPF R+V+  R+A  S GPLKG+LV +VD+IDQ R L+DGP +GV RQ+ RLN LHLTK+
Sbjct: 1   MPFERFVQTGRIAKASAGPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKY 60

Query: 217 RLKYPFTAPTRVVRKAWTDAQLNEKWAKSQWAQKLANKEKRAQMTDYDRFKLTSARVKRN 396
           R+K+P+TAPTR+VRKAWT++ L  +W  S W+ K  N  KR+ + D+DRFKL  A+ +RN
Sbjct: 61  RIKFPYTAPTRIVRKAWTESDLKAQWKVSPWSVKAQNICKRSSLNDFDRFKLRYAKRQRN 120

Query: 397 RARTAVFKSLKVKAARAG 450
           +  T  F +LK +    G
Sbjct: 121 KLLTIAFNTLKKRTKADG 138


>Y09766-1|CAA70905.1|  166|Drosophila melanogaster ribosomal protein
           L14 protein.
          Length = 166

 Score =  165 bits (400), Expect = 4e-41
 Identities = 73/138 (52%), Positives = 99/138 (71%)
 Frame = +1

Query: 37  MPFARYVEPWRVALVSDGPLKGKLVGVVDIIDQTRALIDGPGSGVSRQQIRLNQLHLTKF 216
           MPF R+V+  R+A  S GPLKG+LV +VD+IDQ R L+DGP +GV RQ+ RLN LHLTK+
Sbjct: 1   MPFERFVQTGRIAKASAGPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKY 60

Query: 217 RLKYPFTAPTRVVRKAWTDAQLNEKWAKSQWAQKLANKEKRAQMTDYDRFKLTSARVKRN 396
           R+K+P+TAPTR+VRKAWT++ L  +W  S W+ K  N  KR+ + D+DRFKL  A+ +RN
Sbjct: 61  RIKFPYTAPTRIVRKAWTESDLKAQWKVSPWSVKAQNICKRSSLNDFDRFKLRYAKRQRN 120

Query: 397 RARTAVFKSLKVKAARAG 450
           +  T  F +LK +    G
Sbjct: 121 KLLTIAFNTLKKRTKADG 138


>AE014296-1484|AAF50393.1|  166|Drosophila melanogaster CG6253-PA
           protein.
          Length = 166

 Score =  165 bits (400), Expect = 4e-41
 Identities = 73/138 (52%), Positives = 99/138 (71%)
 Frame = +1

Query: 37  MPFARYVEPWRVALVSDGPLKGKLVGVVDIIDQTRALIDGPGSGVSRQQIRLNQLHLTKF 216
           MPF R+V+  R+A  S GPLKG+LV +VD+IDQ R L+DGP +GV RQ+ RLN LHLTK+
Sbjct: 1   MPFERFVQTGRIAKASAGPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKY 60

Query: 217 RLKYPFTAPTRVVRKAWTDAQLNEKWAKSQWAQKLANKEKRAQMTDYDRFKLTSARVKRN 396
           R+K+P+TAPTR+VRKAWT++ L  +W  S W+ K  N  KR+ + D+DRFKL  A+ +RN
Sbjct: 61  RIKFPYTAPTRIVRKAWTESDLKAQWKVSPWSVKAQNICKRSSLNDFDRFKLRYAKRQRN 120

Query: 397 RARTAVFKSLKVKAARAG 450
           +  T  F +LK +    G
Sbjct: 121 KLLTIAFNTLKKRTKADG 138


>BT016128-1|AAV37013.1|  167|Drosophila melanogaster GM06787p
           protein.
          Length = 167

 Score =  160 bits (389), Expect = 8e-40
 Identities = 71/137 (51%), Positives = 97/137 (70%)
 Frame = +1

Query: 40  PFARYVEPWRVALVSDGPLKGKLVGVVDIIDQTRALIDGPGSGVSRQQIRLNQLHLTKFR 219
           PF R+V+  R+A  S GPLKG+LV +VD+IDQ R L+DGP +GV RQ+ RLN LHLTK+R
Sbjct: 3   PFERFVQTGRIAKASAGPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKYR 62

Query: 220 LKYPFTAPTRVVRKAWTDAQLNEKWAKSQWAQKLANKEKRAQMTDYDRFKLTSARVKRNR 399
           +K+P+TAPTR+VRKAW ++ L  +W  S W+ K  N  KR+ + D+DRFKL  A+ +RN+
Sbjct: 63  IKFPYTAPTRIVRKAWIESDLKAQWKVSPWSVKAQNICKRSSLNDFDRFKLRYAKRQRNK 122

Query: 400 ARTAVFKSLKVKAARAG 450
             T  F +LK +    G
Sbjct: 123 LLTIAFNTLKKRTKADG 139


>AE014134-600|AAF51111.1|  181|Drosophila melanogaster CG31952-PA
           protein.
          Length = 181

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 16/56 (28%), Positives = 30/56 (53%)
 Frame = +1

Query: 319 LANKEKRAQMTDYDRFKLTSARVKRNRARTAVFKSLKVKAARAGVFGKSKIPKSAV 486
           +A +EK A   ++ + K T+A      A T+   +++ KAA A V  ++K   +A+
Sbjct: 79  IAAREKAANAAEFTKEKATAAAAAATEAATSAASTVREKAAAAAVAVRAKASATAI 134


>BT021278-1|AAX33426.1|  934|Drosophila melanogaster RE42943p
           protein.
          Length = 934

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
 Frame = +1

Query: 229 PFTAPTRVVRKAWTDAQLNEKWAKSQWA-QKLANKEKRAQMTDYDRFKLTSARVKRNRAR 405
           P T    +     + A+  E+ AKSQWA Q L  K +R   +D     +  AR ++ +  
Sbjct: 276 PMTVAMLMKNTVRSAARFLERLAKSQWALQTLPLKPQRPVPSD-----IVIARAQKPKDI 330

Query: 406 TAVFKSLKVKAARAGVFGKSK 468
             + K + ++A    ++G  K
Sbjct: 331 AVLAKEIGLEAREVSLYGNKK 351


>AY118377-1|AAM48406.1| 1265|Drosophila melanogaster RE24170p
           protein.
          Length = 1265

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -3

Query: 204 MELVEANLLPRNTTAGTVNKCACLINDIN 118
           +EL+++N L  N+T   + KC    N +N
Sbjct: 731 IELLKSNQLDENSTTDNIEKCVAFFNAMN 759


>AF082097-1|AAC78847.1|  934|Drosophila melanogaster C1-THF synthase
           homolog protein.
          Length = 934

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
 Frame = +1

Query: 229 PFTAPTRVVRKAWTDAQLNEKWAKSQWA-QKLANKEKRAQMTDYDRFKLTSARVKRNRAR 405
           P T    +     + A+  E+ AKSQWA Q L  K +R   +D     +  AR ++ +  
Sbjct: 276 PMTVAMLMKNTVRSAARFLERLAKSQWALQTLPLKPQRPVPSD-----IVIARAQKPKDI 330

Query: 406 TAVFKSLKVKAARAGVFGKSK 468
             + K + ++A    ++G  K
Sbjct: 331 AVLAKEIGLEAREVSLYGNKK 351


>AE014297-1172|AAN13479.1|  934|Drosophila melanogaster CG4067-PC,
           isoform C protein.
          Length = 934

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
 Frame = +1

Query: 229 PFTAPTRVVRKAWTDAQLNEKWAKSQWA-QKLANKEKRAQMTDYDRFKLTSARVKRNRAR 405
           P T    +     + A+  E+ AKSQWA Q L  K +R   +D     +  AR ++ +  
Sbjct: 276 PMTVAMLMKNTVRSAARFLERLAKSQWALQTLPLKPQRPVPSD-----IVIARAQKPKDI 330

Query: 406 TAVFKSLKVKAARAGVFGKSK 468
             + K + ++A    ++G  K
Sbjct: 331 AVLAKEIGLEAREVSLYGNKK 351


>AE014297-1171|AAN13478.1|  934|Drosophila melanogaster CG4067-PA,
           isoform A protein.
          Length = 934

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
 Frame = +1

Query: 229 PFTAPTRVVRKAWTDAQLNEKWAKSQWA-QKLANKEKRAQMTDYDRFKLTSARVKRNRAR 405
           P T    +     + A+  E+ AKSQWA Q L  K +R   +D     +  AR ++ +  
Sbjct: 276 PMTVAMLMKNTVRSAARFLERLAKSQWALQTLPLKPQRPVPSD-----IVIARAQKPKDI 330

Query: 406 TAVFKSLKVKAARAGVFGKSK 468
             + K + ++A    ++G  K
Sbjct: 331 AVLAKEIGLEAREVSLYGNKK 351


>AE014297-1168|AAX52944.1|  968|Drosophila melanogaster CG4067-PD,
           isoform D protein.
          Length = 968

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
 Frame = +1

Query: 229 PFTAPTRVVRKAWTDAQLNEKWAKSQWA-QKLANKEKRAQMTDYDRFKLTSARVKRNRAR 405
           P T    +     + A+  E+ AKSQWA Q L  K +R   +D     +  AR ++ +  
Sbjct: 310 PMTVAMLMKNTVRSAARFLERLAKSQWALQTLPLKPQRPVPSD-----IVIARAQKPKDI 364

Query: 406 TAVFKSLKVKAARAGVFGKSK 468
             + K + ++A    ++G  K
Sbjct: 365 AVLAKEIGLEAREVSLYGNKK 385


>AE014297-1167|AAG22140.2|  968|Drosophila melanogaster CG4067-PB,
           isoform B protein.
          Length = 968

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
 Frame = +1

Query: 229 PFTAPTRVVRKAWTDAQLNEKWAKSQWA-QKLANKEKRAQMTDYDRFKLTSARVKRNRAR 405
           P T    +     + A+  E+ AKSQWA Q L  K +R   +D     +  AR ++ +  
Sbjct: 310 PMTVAMLMKNTVRSAARFLERLAKSQWALQTLPLKPQRPVPSD-----IVIARAQKPKDI 364

Query: 406 TAVFKSLKVKAARAGVFGKSK 468
             + K + ++A    ++G  K
Sbjct: 365 AVLAKEIGLEAREVSLYGNKK 385


>AE014296-2323|AAF49788.1| 1265|Drosophila melanogaster CG9206-PA
           protein.
          Length = 1265

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -3

Query: 204 MELVEANLLPRNTTAGTVNKCACLINDIN 118
           +EL+++N L  N+T   + KC    N +N
Sbjct: 731 IELLKSNQLDENSTTDNIEKCVAFFNAMN 759


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,429,529
Number of Sequences: 53049
Number of extensions: 414481
Number of successful extensions: 1159
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1159
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1726192251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)