Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_N05
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0725 + 31508156-31508277,31508950-31509118,31509311-315094...    28   5.1  
09_05_0012 - 20063456-20064601                                         27   6.8  

>01_06_0725 +
           31508156-31508277,31508950-31509118,31509311-31509406,
           31510037-31510097,31510387-31510451,31511104-31511178,
           31511276-31511351,31512140-31512303,31512398-31512421
          Length = 283

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = -1

Query: 312 TGDFXIVNGLYIVFLYFFLYKYIISEISEK**WALKIISHRKAQNAP 172
           + D  I+N   I+F+Y+F+   I S       W +K I HR+    P
Sbjct: 203 SADEYIINNAIILFMYYFIGSSIPSGFVL---WVMKDIPHRQTVERP 246


>09_05_0012 - 20063456-20064601
          Length = 381

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = +2

Query: 308 PVQEMVALTSWAAYFPILGLPKIRVDGEGWLNCDKRLXXXXXXXP 442
           PV+ + A    A Y+PI+  P ++ +G G ++    L       P
Sbjct: 230 PVEALAAAPPPAVYYPIVADPLLQANGGGSISISSGLAPASSATP 274


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,624,690
Number of Sequences: 37544
Number of extensions: 228941
Number of successful extensions: 346
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 346
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)