Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_N05
         (516 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1796|AAF48189.3| 1470|Drosophila melanogaster CG17762-P...    28   6.5  
AE014298-1795|AAF48187.3| 1470|Drosophila melanogaster CG17762-P...    28   6.5  
AE014298-1794|AAF48188.3| 1173|Drosophila melanogaster CG17762-P...    28   6.5  
AE014298-1793|AAF48190.3| 1173|Drosophila melanogaster CG17762-P...    28   6.5  
AE014297-3813|AAF56477.1|  432|Drosophila melanogaster CG4582-PA...    28   8.6  

>AE014298-1796|AAF48189.3| 1470|Drosophila melanogaster CG17762-PD,
           isoform D protein.
          Length = 1470

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 281 YSPFTIXKSPVQEMVALTSWAAYFPILGLPKI 376
           YSP +    PVQ+++A+   + Y  ILG P +
Sbjct: 49  YSPTSFAFDPVQKLLAIGDKSGYIRILGRPGV 80


>AE014298-1795|AAF48187.3| 1470|Drosophila melanogaster CG17762-PC,
           isoform C protein.
          Length = 1470

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 281 YSPFTIXKSPVQEMVALTSWAAYFPILGLPKI 376
           YSP +    PVQ+++A+   + Y  ILG P +
Sbjct: 49  YSPTSFAFDPVQKLLAIGDKSGYIRILGRPGV 80


>AE014298-1794|AAF48188.3| 1173|Drosophila melanogaster CG17762-PB,
           isoform B protein.
          Length = 1173

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 281 YSPFTIXKSPVQEMVALTSWAAYFPILGLPKI 376
           YSP +    PVQ+++A+   + Y  ILG P +
Sbjct: 49  YSPTSFAFDPVQKLLAIGDKSGYIRILGRPGV 80


>AE014298-1793|AAF48190.3| 1173|Drosophila melanogaster CG17762-PA,
           isoform A protein.
          Length = 1173

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 281 YSPFTIXKSPVQEMVALTSWAAYFPILGLPKI 376
           YSP +    PVQ+++A+   + Y  ILG P +
Sbjct: 49  YSPTSFAFDPVQKLLAIGDKSGYIRILGRPGV 80


>AE014297-3813|AAF56477.1|  432|Drosophila melanogaster CG4582-PA
           protein.
          Length = 432

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +3

Query: 72  GRGEVANYITQ*YTI-PYNNYCGTDISLLIYKERMERFEPFDAILFSM 212
           GRG +A+YIT  Y + P        +  L ++E   RFE    + FSM
Sbjct: 204 GRGAIADYITASYRVKPVGQVLAKFVDFL-HQEAGMRFEDLQLVGFSM 250


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,353,724
Number of Sequences: 53049
Number of extensions: 386250
Number of successful extensions: 536
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)