Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_N04
         (527 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021410-1|AAX33558.1| 1061|Drosophila melanogaster LD06566p pro...    28   6.8  
AF464851-1|AAM09646.1| 1061|Drosophila melanogaster Smad-ubiquit...    28   6.8  
AF416571-1|AAL09691.1| 1061|Drosophila melanogaster ubiquitin-pr...    28   6.8  
AF216521-1|AAF21125.1| 1061|Drosophila melanogaster E3 ubiquitin...    28   6.8  
AE013599-2520|AAF57824.3| 1061|Drosophila melanogaster CG4943-PA...    28   6.8  
BT025941-1|ABG02185.1|  207|Drosophila melanogaster IP14143p pro...    28   9.0  
BT025938-1|ABG02182.1|  207|Drosophila melanogaster IP14043p pro...    28   9.0  
AE014134-759|AAF50995.3| 1118|Drosophila melanogaster CG15635-PA...    28   9.0  

>BT021410-1|AAX33558.1| 1061|Drosophila melanogaster LD06566p
           protein.
          Length = 1061

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 441 TRGNTSERSGNPPTLVSTWTRRESATTT 524
           T GN S ++  P +  + WT+ ++ATTT
Sbjct: 368 TSGNGSGQAAQPQSASNGWTQEDAATTT 395


>AF464851-1|AAM09646.1| 1061|Drosophila melanogaster Smad-ubiquitin
           E3 ligase Smurf1 protein.
          Length = 1061

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 441 TRGNTSERSGNPPTLVSTWTRRESATTT 524
           T GN S ++  P +  + WT+ ++ATTT
Sbjct: 368 TSGNGSGQAAQPQSASNGWTQEDAATTT 395


>AF416571-1|AAL09691.1| 1061|Drosophila melanogaster
           ubiquitin-protein ligase protein.
          Length = 1061

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 441 TRGNTSERSGNPPTLVSTWTRRESATTT 524
           T GN S ++  P +  + WT+ ++ATTT
Sbjct: 368 TSGNGSGQAAQPQSASNGWTQEDAATTT 395


>AF216521-1|AAF21125.1| 1061|Drosophila melanogaster E3 ubiquitin
           ligase protein.
          Length = 1061

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 441 TRGNTSERSGNPPTLVSTWTRRESATTT 524
           T GN S ++  P +  + WT+ ++ATTT
Sbjct: 368 TSGNGSGQAAQPQSASNGWTQEDAATTT 395


>AE013599-2520|AAF57824.3| 1061|Drosophila melanogaster CG4943-PA
           protein.
          Length = 1061

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 441 TRGNTSERSGNPPTLVSTWTRRESATTT 524
           T GN S ++  P +  + WT+ ++ATTT
Sbjct: 368 TSGNGSGQAAQPQSASNGWTQEDAATTT 395


>BT025941-1|ABG02185.1|  207|Drosophila melanogaster IP14143p
           protein.
          Length = 207

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 454 PPRGPETLQLWFPLGLVANQPQ 519
           PP  P T  +W+PL +  N PQ
Sbjct: 97  PPPDPATPGVWYPLPIYGNAPQ 118


>BT025938-1|ABG02182.1|  207|Drosophila melanogaster IP14043p
           protein.
          Length = 207

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 454 PPRGPETLQLWFPLGLVANQPQ 519
           PP  P T  +W+PL +  N PQ
Sbjct: 97  PPPDPATPGVWYPLPIYGNAPQ 118


>AE014134-759|AAF50995.3| 1118|Drosophila melanogaster CG15635-PA
           protein.
          Length = 1118

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 454 PPRGPETLQLWFPLGLVANQPQ 519
           PP  P T  +W+PL +  N PQ
Sbjct: 79  PPPDPATPGVWYPLPIYGNAPQ 100


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,593,073
Number of Sequences: 53049
Number of extensions: 488713
Number of successful extensions: 1500
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1500
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1970722560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)