Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_N04
(527 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 31 0.67
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 31 0.67
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 31 0.67
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 31 0.67
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 31 0.67
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 31 0.67
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 31 0.67
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 31 0.67
Z80214-2|CAB02264.2| 338|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical pr... 29 2.7
AL117195-28|CAB55014.1| 458|Caenorhabditis elegans Hypothetical... 29 2.7
AL110485-4|CAB60350.1| 220|Caenorhabditis elegans Hypothetical ... 28 4.8
Z70310-5|CAA94369.1| 1141|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical pr... 27 8.3
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 30.7 bits (66), Expect = 0.67
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 423 TKVPTLTRGNTSERSGNPPTLVSTWTRRESATTTG 527
T P+ + G T+ RS PP L+S +R S ++TG
Sbjct: 506 TSQPSTSGGITTPRSSQPPPLMSPVSRHNSMSSTG 540
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 30.7 bits (66), Expect = 0.67
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 423 TKVPTLTRGNTSERSGNPPTLVSTWTRRESATTTG 527
T P+ + G T+ RS PP L+S +R S ++TG
Sbjct: 797 TSQPSTSGGITTPRSSQPPPLMSPVSRHNSMSSTG 831
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 30.7 bits (66), Expect = 0.67
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 423 TKVPTLTRGNTSERSGNPPTLVSTWTRRESATTTG 527
T P+ + G T+ RS PP L+S +R S ++TG
Sbjct: 812 TSQPSTSGGITTPRSSQPPPLMSPVSRHNSMSSTG 846
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 30.7 bits (66), Expect = 0.67
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 423 TKVPTLTRGNTSERSGNPPTLVSTWTRRESATTTG 527
T P+ + G T+ RS PP L+S +R S ++TG
Sbjct: 812 TSQPSTSGGITTPRSSQPPPLMSPVSRHNSMSSTG 846
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 30.7 bits (66), Expect = 0.67
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 423 TKVPTLTRGNTSERSGNPPTLVSTWTRRESATTTG 527
T P+ + G T+ RS PP L+S +R S ++TG
Sbjct: 506 TSQPSTSGGITTPRSSQPPPLMSPVSRHNSMSSTG 540
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 30.7 bits (66), Expect = 0.67
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 423 TKVPTLTRGNTSERSGNPPTLVSTWTRRESATTTG 527
T P+ + G T+ RS PP L+S +R S ++TG
Sbjct: 797 TSQPSTSGGITTPRSSQPPPLMSPVSRHNSMSSTG 831
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 30.7 bits (66), Expect = 0.67
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 423 TKVPTLTRGNTSERSGNPPTLVSTWTRRESATTTG 527
T P+ + G T+ RS PP L+S +R S ++TG
Sbjct: 812 TSQPSTSGGITTPRSSQPPPLMSPVSRHNSMSSTG 846
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 30.7 bits (66), Expect = 0.67
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 423 TKVPTLTRGNTSERSGNPPTLVSTWTRRESATTTG 527
T P+ + G T+ RS PP L+S +R S ++TG
Sbjct: 812 TSQPSTSGGITTPRSSQPPPLMSPVSRHNSMSSTG 846
>Z80214-2|CAB02264.2| 338|Caenorhabditis elegans Hypothetical
protein C27D8.4 protein.
Length = 338
Score = 29.9 bits (64), Expect = 1.2
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = -1
Query: 194 RWSHRHNYFPXNKPIIVSQRNLRTXYIFFIFNYLFSAILVRFSA---RGIHSLERRHPVG 24
RW N + KP+ S N ++ FI YL +A L A RG H + ++ +
Sbjct: 5 RWGILENKWRYYKPLAFSSSNFLVEFLIFIHVYLLAAWLALREAWFDRGFHIYKLKNELF 64
Query: 23 SS 18
SS
Sbjct: 65 SS 66
>Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical
protein C08B11.3 protein.
Length = 1244
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = -2
Query: 337 IERVSSILTRVSFAVRNANTIHMVTVIVSRFRFICFETNCRWSPM 203
+ +V++I+ +SF N TI + T V +F +C +C+WSP+
Sbjct: 296 LNQVTTIIRNLSFEPANRVTI-VKTWPVMKFLIMC--ASCKWSPL 337
>AL117195-28|CAB55014.1| 458|Caenorhabditis elegans Hypothetical
protein Y57A10A.11 protein.
Length = 458
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +3
Query: 372 PHKKKTLQSGCIIQKR*TKVPTLTRGNTSERSGNPPTLVSTWTRRESATTTG 527
P KT +K T T T ++ + P T +T TRR S TTTG
Sbjct: 119 PPPPKTEAPTTTTKKTTTTTTTTTTTTSTTTTEAPTTTKTTTTRRPSTTTTG 170
>AL110485-4|CAB60350.1| 220|Caenorhabditis elegans Hypothetical
protein Y46G5A.5 protein.
Length = 220
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 245 PFYMFRDQLSMVADVVSRWSHRH 177
P ++F QLS V D+ S W H H
Sbjct: 94 PDHLFLLQLSAVIDIASHWLHLH 116
>Z70310-5|CAA94369.1| 1141|Caenorhabditis elegans Hypothetical
protein R11A8.6 protein.
Length = 1141
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -1
Query: 290 EREHHTH--GDCYSLSLPFYMFRDQLSMVADVVSRWSHRHNYF 168
+R H T G ++ LP Y S + DVV RW+H++ ++
Sbjct: 39 DRPHFTFYDGPPFATGLPHYGHM-LTSTIKDVVGRWAHQNGHY 80
>Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical
protein C30F2.1 protein.
Length = 307
Score = 27.1 bits (57), Expect = 8.3
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = -2
Query: 409 IIHPLCNVFFL*GQYSELPAI-LNYIERVSSILTRVSFA---VRNANTIHMVT 263
+I LC VF+ Y EL A+ LN + V+ +FA + N +H+V+
Sbjct: 19 LIAALCGVFYYITVYQELSALSLNVKKSVAEFSVATNFAWEQIATLNELHLVS 71
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,542,358
Number of Sequences: 27780
Number of extensions: 249661
Number of successful extensions: 650
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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