Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_N03
(596 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 42 5e-05
SPBP8B7.11 |nxt3||ubiquitin protease cofactor |Schizosaccharomyc... 38 0.001
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 35 0.010
SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces po... 31 0.097
SPBC839.10 |usp107|snu71|U1 snRNP-associated protein Usp107|Schi... 31 0.13
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 30 0.22
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 30 0.29
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 29 0.39
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 29 0.39
SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase |Schizosacc... 29 0.52
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 29 0.52
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 29 0.68
SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|ch... 29 0.68
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 28 0.90
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 28 0.90
SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, An... 28 1.2
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 28 1.2
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 28 1.2
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb... 27 1.6
SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|c... 27 1.6
SPAPB21F2.03 |||ribosome biogenesis protein |Schizosaccharomyces... 27 2.1
SPBC29A10.05 |exo1|mut2|exonuclease I Exo1|Schizosaccharomyces p... 27 2.1
SPCC1827.04 |||ankyrin repeat protein, unknown biological role|S... 27 2.7
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 27 2.7
SPBC530.15c ||SPBC661.01|spermidine family transporter |Schizosa... 27 2.7
SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces po... 27 2.7
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 27 2.7
SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 27 2.7
SPAC977.17 |||MIP water channel|Schizosaccharomyces pombe|chr 1|... 26 4.8
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 26 4.8
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 4.8
SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA polymerase|Sc... 26 4.8
SPAC1565.07c |||TATA binding protein interacting protein |Schizo... 25 6.3
SPCC16A11.13 |usp106|luc7|U1 snRNP-associated protein Usp106|Sch... 25 6.3
SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr... 25 6.3
SPBC776.10c |cog6||Golgi transport complex peripheral subunit Co... 25 6.3
SPBC1198.10c |||asparagine-tRNA ligase Slm5|Schizosaccharomyces ... 25 8.4
SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomy... 25 8.4
SPBC56F2.05c |||transcription factor |Schizosaccharomyces pombe|... 25 8.4
SPAC16A10.08c |mug74|SPAC589.01c|sequence orphan|Schizosaccharom... 25 8.4
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 25 8.4
SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|... 25 8.4
SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|c... 25 8.4
SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces pom... 25 8.4
SPCC24B10.08c |||histone acetyltransferase complex subunit Ada2 ... 25 8.4
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 42.3 bits (95), Expect = 5e-05
Identities = 35/110 (31%), Positives = 56/110 (50%)
Frame = +2
Query: 155 KHSQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAK 334
K +DF+K I + A +NS + E LKE S + ++ EL+N L+ + + K
Sbjct: 455 KKIKDFEK-IEQDLRACLNSSSNE-----LKEKSALIDKKDQELNN-LREQIKEQK-KVS 506
Query: 335 EVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLA 484
E Q + Q+L+R + + +K H E Q L +LQT I N+ S L+
Sbjct: 507 ESTQSSLQSLQRDILNEKKKHEVYESQLNELKGELQTEISNSEHLSSQLS 556
Score = 33.5 bits (73), Expect = 0.024
Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Frame = +2
Query: 146 DLEKHSQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 325
DLEK +D +K + ++ TE+++ +L+EG + ++++ELS+ L+ A
Sbjct: 1341 DLEKALKDSEKNFLRK-----EAEMTENIH-SLEEGKEETKKEIAELSSRLEDNQL-ATN 1393
Query: 326 KAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKL--QTAIQNTLKESQNLAKEVGV 499
K K L Q + R ED+ K + E +L E L Q +++L +++N E+
Sbjct: 1394 KLKNQLDHLNQEI-RLKEDVLK---EKESLIISLEESLSNQRQKESSLLDAKN---ELEH 1446
Query: 500 NMDQTSQK 523
+D TS+K
Sbjct: 1447 MLDDTSRK 1454
>SPBP8B7.11 |nxt3||ubiquitin protease cofactor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 434
Score = 37.9 bits (84), Expect = 0.001
Identities = 40/140 (28%), Positives = 59/140 (42%), Gaps = 13/140 (9%)
Frame = +2
Query: 152 EKHSQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELS---------NSLQG 304
E H QD T + A + S T+SLN+A + V QV+E S N LQ
Sbjct: 177 EGHYQDPAATENNFATAALISNETDSLNQATLAVPEEPVIQVTEASVPSFVSQQENQLQD 236
Query: 305 ALTDANGKAKEVLQQARQNLERTVED----LRKAHPDVEKQATALHEKLQTAIQNTLKES 472
+N K + + + N+ + + + HPDV+ QA+ + +T +
Sbjct: 237 EALTSNSKNADAIGASDANVATAPKSWADLIARNHPDVKSQAS---------VSSTASTT 287
Query: 473 QNLAKEVGVNMDQTSQKLAP 532
K GVN DQT Q AP
Sbjct: 288 GQTVK--GVNADQTQQPTAP 305
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 34.7 bits (76), Expect = 0.010
Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 5/124 (4%)
Frame = +2
Query: 224 ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHP- 400
ES N+ DSM ++ ELSN L+ AN K E R+ + DLR+
Sbjct: 824 ESSNQEYTATVDSMNSRILELSNDLR----VANSKLSECSDDVRRLTLQNSFDLREHQTL 879
Query: 401 --DVEKQATALHE--KLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKH 568
++ T L + LQ ++N L+ KE M++ + L KL AA D ++
Sbjct: 880 VLQLQSNITELKQDITLQRTVRNQLEIQTTELKERLKFMEERQENLQSKLIAANKDTTQN 939
Query: 569 AEEV 580
+ V
Sbjct: 940 PDNV 943
>SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 412
Score = 31.5 bits (68), Expect = 0.097
Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 12/101 (11%)
Frame = +2
Query: 191 QFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGA------------LTDANGKAK 334
QF A N+K E + +EG D+ +QVS L L+ A A K
Sbjct: 99 QFEATENAKRKEEIEAQYREGYDTAQKQVSSLVRFLRFASHNCVHPSDDAPFNSAVEKLL 158
Query: 335 EVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQN 457
++ + + E+ V DL + DV ++ + + + + N
Sbjct: 159 VIVYEGTEKSEKAVADLNDSSTDVVPESEVSFQTISSRVDN 199
>SPBC839.10 |usp107|snu71|U1 snRNP-associated protein
Usp107|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 31.1 bits (67), Expect = 0.13
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 13/119 (10%)
Frame = +2
Query: 185 SEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTD------ANGKAKEV-- 340
+EQF+ + + N + + G + + ++++ N +G + A K KE+
Sbjct: 189 NEQFSRALEALNDFVVPPLYEGGPSTRLSLITDVEN--EGLYREWQTSRYARNKQKEINI 246
Query: 341 LQQARQNLERTVEDLRK--AHPDVEKQATALHEKLQTAIQNTLKESQ---NLAKEVGVN 502
LQQ R NLER +D+ +E+ A EK + +QN +K S+ N A G+N
Sbjct: 247 LQQIRFNLERICQDIGNFDVRSRIERAARQAREKNEKLLQN-VKTSEIPINAADLEGIN 304
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 30.3 bits (65), Expect = 0.22
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Frame = +2
Query: 242 LKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQA---RQNLERTVEDLRKAHPDVEK 412
+ + S++ V + E + L L+ K+ L++ +Q L EDLRK D EK
Sbjct: 1005 ITKDSETRVALLLEENKHLNNELSSHRNAEKQHLEKENDYKQQLLLVTEDLRKTREDYEK 1064
Query: 413 Q------ATALHEKLQTAIQNTLKESQNLAKEVGV 499
+ A + +KL+ L++ ++L KE+ +
Sbjct: 1065 ELLRHADARSTLQKLREDYTKALEQVEDLNKEIAL 1099
Score = 26.6 bits (56), Expect = 2.7
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +2
Query: 263 MVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQ 442
+VQ+ S L + L +D + K E L+ + R V+DL K + +Q T L+EK+Q
Sbjct: 194 LVQEKSALVSDLASLQSD-HSKVCEKLEVS----SRQVQDLEKKLAGLAQQNTELNEKIQ 248
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 29.9 bits (64), Expect = 0.29
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Frame = +2
Query: 326 KAKEVLQ---QARQNLERTVEDLRK---AHPD-VEKQATALHEKLQTAIQNTLKESQNLA 484
K KE ++ Q ++ LER VE+LRK + D VE +A + + + E Q L
Sbjct: 128 KEKEEMEGSLQGKEKLEREVENLRKELDKYKDLVETEAEKRAAITKEECEKSWLEQQKLY 187
Query: 485 KEVGVNMDQTSQKLAPKLK 541
K++ T QKL K++
Sbjct: 188 KDMEQENASTIQKLTSKIR 206
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 29.5 bits (63), Expect = 0.39
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 397 PRRRETSHRITREAANRHPEHTKGEPEPGEGSRRQHGSDLTETGAKTESGIR 552
P R ++ ++RE NR T+ G + HGS LT+TG + ++
Sbjct: 15 PSRASSNTHLSREGTNRSSNVTRTV----SGRKSNHGSSLTDTGESDQLSLK 62
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 29.5 bits (63), Expect = 0.39
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +2
Query: 341 LQQARQNLERTVEDLRKAHPDVEK 412
++QAR E T+ED+++A P++EK
Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149
>SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 29.1 bits (62), Expect = 0.52
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Frame = +2
Query: 206 VNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDL 385
+N S++ L + D + S + NG A+E+ A + L VE+L
Sbjct: 29 LNLPTNSSISVTLSQ-DDLRTVTTASCSEKFENDTLWLNGNAEEIF--ANKRLRVCVEEL 85
Query: 386 RKAHPDVEKQATALHE----KLQTAIQNTLKESQNLA 484
RKA D+E++ L + KL +N + LA
Sbjct: 86 RKARLDLEEENDDLDKIGALKLHVVSENNFPTAAGLA 122
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 29.1 bits (62), Expect = 0.52
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Frame = +2
Query: 167 DFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQ 346
D K+ FN+I + E K L ++ + +Q+SE++ +A KA++ L+
Sbjct: 14 DSLKSKISNFNSIFDRFLQEERKKLLNNKNEYL-RQLSEIN--------EAQKKAEKSLE 64
Query: 347 QARQNLERTVEDLRKAHPD---VEKQATALHEKLQTAIQNTLKESQNL 481
Q + E L K H + E++ + EKL ++ K S+ L
Sbjct: 65 QTEARKQNFTELLEKEHEEQAITEQEIFSFQEKLDAMLKRKQKLSEEL 112
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 28.7 bits (61), Expect = 0.68
Identities = 26/98 (26%), Positives = 38/98 (38%), Gaps = 3/98 (3%)
Frame = +1
Query: 202 NRQLKEHGELEQSTEGRLRLHGAAGLRVIQQSTGCVDRRKR*S*GSAPTSSPELGAHSRG 381
N KE +Q TEG+ H QQ+T RK S P+ P G H+R
Sbjct: 673 NHHRKESIPSKQPTEGQ---HARQESLPSQQTTETKHLRKE----STPSKQPTEGQHTRQ 725
Query: 382 SPQGAPRRRETSHRITREAANRHP---EHTKGEPEPGE 486
+ + ET H ++ P +H + E P +
Sbjct: 726 ESLPSQQTTETKHLRKESIPSKQPTEGQHARQESLPSQ 763
Score = 28.3 bits (60), Expect = 0.90
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = +1
Query: 289 QQSTGCVDRRKR*S*GSAPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHP---EH 459
QQST RK S P+ P G H+R + + ET H ++ P +H
Sbjct: 667 QQSTVSNHHRKE----SIPSKQPTEGQHARQESLPSQQTTETKHLRKESTPSKQPTEGQH 722
Query: 460 TKGEPEPGE 486
T+ E P +
Sbjct: 723 TRQESLPSQ 731
>SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 677
Score = 28.7 bits (61), Expect = 0.68
Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Frame = +2
Query: 272 QVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVE------KQATALHE 433
Q +E SN+ A ++ + + +E L L TV + R + + + A+ ++E
Sbjct: 550 QSNETSNTFPAASSNISSQLRE-LHTKIDELRETVSNFRADYNSIRTSLNQLEAASGINE 608
Query: 434 KLQTAIQNTLKESQNLAKEVGVNMDQTS 517
++QT ++L S ++ G QTS
Sbjct: 609 RIQTTSADSLLNSNGMSGTEGFENTQTS 636
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 28.3 bits (60), Expect = 0.90
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 167 DFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTD-ANGKAKEVL 343
D T Q + I+ ++ +ES + A SM + S+S A NG+AKE
Sbjct: 426 DLNDTTKNQNDQILPNETSESDDDA--NSISSMENEEERTSDSKSSAKQGKGNGRAKETP 483
Query: 344 QQARQNLERTVED 382
++ R ++T ED
Sbjct: 484 EEKRARKKKTKED 496
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 28.3 bits (60), Expect = 0.90
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 7/135 (5%)
Frame = +2
Query: 107 AMVRRDAPNTILQDLEKHSQDFQKTISEQFNA--IVNSKNTESLNKALKEGSDSMVQQVS 280
+M R A + +K S D T S+Q +V S N +LNK +E SDS+ Q S
Sbjct: 75 SMSRTSASSFRYSSPQKSSIDTPITSSDQGLTPDLVGSSN--ALNKPTRE-SDSLKHQKS 131
Query: 281 E-LSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEK----LQT 445
+ NSL +L+ ++ +R NL+ + A D + A L L++
Sbjct: 132 HPMLNSLGSSLSLKKSVSRPPSSMSRTNLDVSSRWDNTADNDSQIDAQDLSRSTPSPLRS 191
Query: 446 AIQNTLKESQNLAKE 490
A++N L+ + K+
Sbjct: 192 AMENVLQSLNAMGKK 206
>SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, Anp
family |Schizosaccharomyces pombe|chr 2|||Manual
Length = 430
Score = 27.9 bits (59), Expect = 1.2
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Frame = +2
Query: 62 AKCFVLFACVALAHGAMVRRD-----APNTILQDLEKHSQD 169
A+ ++L A + H + RD APNTIL+DL +H +D
Sbjct: 201 ARNWLLSAAIQPYHSWVYWRDVDVETAPNTILEDLMRHDKD 241
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 27.9 bits (59), Expect = 1.2
Identities = 24/125 (19%), Positives = 54/125 (43%), Gaps = 4/125 (3%)
Frame = +2
Query: 119 RDAPNTILQDLEKHSQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSL 298
R + D + S ++ +S F TE+ + L + + ++ +++++L N+
Sbjct: 843 RSLKQELRHDFVQFSGKKEQELSRSFEKF--GLGTETKHDILAQRNRNVSEKMNDLENAA 900
Query: 299 QGALTDANGKAKEVLQQARQN----LERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLK 466
Q + + K + + LE+T+EDL+ A D K L + + + + T K
Sbjct: 901 QKFFSSPDRKNGYLYPSEHTSKIEYLEKTIEDLKLALQDELKNRNLLMDDISSYNKQTTK 960
Query: 467 ESQNL 481
+ +
Sbjct: 961 LQEKI 965
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 27.9 bits (59), Expect = 1.2
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +2
Query: 215 KNTESLNKALKEGSDSMVQQVSELSNSLQGA------LTDANGKAKEVLQQARQNLERT 373
K T++ + +E +S + + E + L A L D+ KAK L+QAR LERT
Sbjct: 364 KETDTTSVERREKLESKLTDLKEEQDKLSAAWEEERKLLDSIKKAKTELEQARIELERT 422
>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 610
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -3
Query: 360 FWRACWSTSLALPFASVNAPCRLLDNSETCCTMESEPSFS 241
F C S +L+LP +N P R+ D +C ++ ++P S
Sbjct: 199 FCNQCSSKTLSLPHLGINQPVRVCD---SCYSLRTKPKGS 235
>SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 27.5 bits (58), Expect = 1.6
Identities = 25/141 (17%), Positives = 51/141 (36%)
Frame = +2
Query: 152 EKHSQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKA 331
++ S++ +KT Q I L K + M S+++ + + N
Sbjct: 253 DQPSEEEEKTSDIQDRKIKTPIKPSLLGKIRSSVNKGMTDVASQVNRGMTDVASQVNKGV 312
Query: 332 KEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDQ 511
V Q + + + K V Q KL+ K+ +NL K +G +
Sbjct: 313 NGVASQVNKGMNGVANQVNKGVTGVASQVRKPVGKLE-------KKFENLEKSIGDTLKS 365
Query: 512 TSQKLAPKLKAAYDDFVKHAE 574
+ + K + +DF ++ +
Sbjct: 366 SIRSSPKSKKRSREDFEENED 386
>SPAPB21F2.03 |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 172
Score = 27.1 bits (57), Expect = 2.1
Identities = 10/44 (22%), Positives = 26/44 (59%)
Frame = +2
Query: 344 QQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQ 475
++AR+NL+ V + + P+++ + + +L+ I+++L Q
Sbjct: 85 RKARENLKVNVSSIGEVLPEIDLDISVANSRLKPVIKDSLSSKQ 128
>SPBC29A10.05 |exo1|mut2|exonuclease I Exo1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 571
Score = 27.1 bits (57), Expect = 2.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 596 RAPFCAPPPRASQSHRMPLSVLAPV 522
+ P A PP +S SH +P+S LA +
Sbjct: 499 QTPNSASPPFSSLSHTLPISALAKI 523
>SPCC1827.04 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 600
Score = 26.6 bits (56), Expect = 2.7
Identities = 29/143 (20%), Positives = 58/143 (40%), Gaps = 7/143 (4%)
Frame = +2
Query: 146 DLEKHSQDFQKTI----SEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALT 313
DL + Q + K + S + V KN + + K L+ G+D + + ++
Sbjct: 417 DLSINFQFYPKNVHLHTSTPLHYAVTQKNAKLVAKLLRNGADPAMLNGN---GKTPFEIS 473
Query: 314 DANGKAKEVLQQARQNLERTVEDLRKAH---PDVEKQATALHEKLQTAIQNTLKESQNLA 484
N + K+ AR L + D A P +Q +K +T ++N ++ +
Sbjct: 474 TGNKEVKDEFLIARHELGESFFDWEAAKVGAPQSREQIQKQRQKAKTKLENQRRDKE--- 530
Query: 485 KEVGVNMDQTSQKLAPKLKAAYD 553
++ + + QK+ + K YD
Sbjct: 531 RQEELRRKEAMQKIEEQSKRDYD 553
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.6 bits (56), Expect = 2.7
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +2
Query: 182 ISEQFN-AIVNSKNTESLNKALKEGSDSMVQQVSELSNS--LQGALTDANGKAKEVLQQA 352
I +Q N +I N KNT N + K + + +S +SNS A+ + +AKE + A
Sbjct: 483 IPQQSNKSIGNHKNTSVANVSSKVANSKFERNISMMSNSNASSPAIFEVGAEAKEKTKDA 542
>SPBC530.15c ||SPBC661.01|spermidine family transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 516
Score = 26.6 bits (56), Expect = 2.7
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +2
Query: 365 ERTVEDLRK-AHPDVEKQATALHEKLQTAIQNTLKES 472
ERT E + A D+EKQ + H++ Q+++ + L+ES
Sbjct: 3 ERTSESSSESASFDLEKQQSNHHDRYQSSVSSELEES 39
>SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 220
Score = 26.6 bits (56), Expect = 2.7
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 206 VNSKNTESLNKALKEGSDSMVQQVSELSNSLQ 301
V +TES N+A+K+ D+ ++ +SE LQ
Sbjct: 184 VKGSSTESHNQAIKDFRDAKIEVISEKDPILQ 215
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 26.6 bits (56), Expect = 2.7
Identities = 26/132 (19%), Positives = 59/132 (44%), Gaps = 9/132 (6%)
Frame = +2
Query: 149 LEKHSQDFQKTISEQFNAIVNSKNTESLNKAL---KEGSDSMVQQVSELSNSLQGALTDA 319
L+K S+ Q T ++ + + ++ + +N+ + KE SD + + E+ N L+ L+
Sbjct: 376 LDKQSRTSQFTTKKERDEWIRNQLLQ-INRNINSTKENSDYLKTEYDEMENELKAKLSRK 434
Query: 320 NG------KAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNL 481
+ + Q N+ ++ + ++ D K KL+++I+N +
Sbjct: 435 KEIEISLESQGDRMSQLLANIT-SINERKENLTDKRKSLWREEAKLKSSIENVKDDLSRS 493
Query: 482 AKEVGVNMDQTS 517
K +G MD+ +
Sbjct: 494 EKALGTTMDRNT 505
>SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 956
Score = 26.6 bits (56), Expect = 2.7
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +2
Query: 131 NTILQDLEKHSQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSL 298
NT+ + + K SQ FQ S +FN + N ++K+L++ + S+ N L
Sbjct: 487 NTVDEAITKQSQTFQLVNSNEFNEV----NANDVHKSLRQNCAKLDFDDSKSKNLL 538
>SPAC977.17 |||MIP water channel|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 25.8 bits (54), Expect = 4.8
Identities = 24/149 (16%), Positives = 66/149 (44%)
Frame = +2
Query: 131 NTILQDLEKHSQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGAL 310
N++++ + + +Q+ + + + N+ NS+ S++ A +GS + + ++ +++ G+
Sbjct: 131 NSVVEKISQKNQEARSRANSRVNSRANSRANSSVSLAGMDGSPNWKR---KMKSAVFGSR 187
Query: 311 TDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKE 490
N E Q R ++ + + P K + +L Q +I ++Q +
Sbjct: 188 VKLN---DEEAQLPRNKSSVSIAEQAASRP---KVSFSLQSSRQPSIAEEQPQTQRKSSA 241
Query: 491 VGVNMDQTSQKLAPKLKAAYDDFVKHAEE 577
+ V + ++ P+ ++ AE+
Sbjct: 242 ITVEHAENAEPETPRNNVSFSRKPSIAEQ 270
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 25.8 bits (54), Expect = 4.8
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 320 NGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTA 448
N +K L+ AR +L+ ++ED KA+ + E+ LQT+
Sbjct: 33 NQLSKLKLEDARADLQSSMEDSNKANGNGEETTDGAEGVLQTS 75
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.8 bits (54), Expect = 4.8
Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +2
Query: 371 TVEDLRKAHPDVEKQATALHEKLQTAIQNT-LKESQNLAKEVGVNMDQTSQKLAPKLKAA 547
++ED + P ++ K + QN K++ K+ G+N +QTS + P ++
Sbjct: 1551 SLEDSNRQKPFNGEKFRRFSSKSRRGSQNRDSKKTGKARKDKGINNNQTSPQNKPSKESL 1610
Query: 548 YDDFVKHAEEV 580
D + + ++V
Sbjct: 1611 KSDTISNEKKV 1621
>SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA
polymerase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1120
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 308 LTDANGKAKEVLQQARQN 361
LTD AKE+LQQAR N
Sbjct: 83 LTDVLSNAKELLQQARLN 100
>SPAC1565.07c |||TATA binding protein interacting protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 25.4 bits (53), Expect = 6.3
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Frame = +2
Query: 230 LNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVE 409
L K E SD ++ ++ LS+ L L DAN L+ L+ ++ L A P+V+
Sbjct: 6 LLKKYVESSDKDIRYMA-LSD-LAARLNDANHLKNLKLESFPDTLDVLLQALSDASPEVQ 63
Query: 410 KQATALHEKLQTAI-QNTLKES-QNLAKEV 493
++A + + I Q+ LK + +NL V
Sbjct: 64 QEAVRCVAIISSKIPQDKLKSTVENLLSGV 93
>SPCC16A11.13 |usp106|luc7|U1 snRNP-associated protein
Usp106|Schizosaccharomyces pombe|chr 3|||Manual
Length = 264
Score = 25.4 bits (53), Expect = 6.3
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 10/111 (9%)
Frame = +2
Query: 140 LQDLEKHSQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALT-- 313
L+DLE+H D K I I ++ ++ K +E D +++ + +S++ +T
Sbjct: 85 LEDLERHVDDCNKRID-----IAEARREKT--KEEEERIDELMRDIIHTDHSIEVIITEM 137
Query: 314 DANGKAKEVLQQARQNLE-RTVEDLRK-------AHPDVEKQATALHEKLQ 442
+A K K V + +E ++ RK + ++ QA+ H+KLQ
Sbjct: 138 EALAKRKLVNDAVKHFIELNRLKTYRKELYDEVISMNEIPSQASTTHQKLQ 188
>SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 749
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = -1
Query: 593 APFCAPPPRASQSHRMPLSVLAPVSVRSDPC*RRLPSPGSGSPLV 459
+PF P + H +L+P++ ++ PSP GSP++
Sbjct: 242 SPFATRRPSLNTDHHGRPILLSPLNYQNSSLNPSTPSPFGGSPVM 286
>SPBC776.10c |cog6||Golgi transport complex peripheral subunit Cog6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 25.4 bits (53), Expect = 6.3
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +2
Query: 143 QDLEKHSQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQ 301
Q ++K S +KT+SE + + + N+ LKE + S V + + +L+
Sbjct: 582 QQIDKFSTFIRKTLSETIDNLQLLTSPIVTNQVLKETAISFVGAIETVDKALE 634
>SPBC1198.10c |||asparagine-tRNA ligase Slm5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 441
Score = 25.0 bits (52), Expect = 8.4
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = -3
Query: 138 IVLGASR-RTIAP*ARATQANNTKHLA 61
+ LG SR TI+P RA Q++ ++HLA
Sbjct: 214 LALGLSRVYTISPAFRAEQSHTSRHLA 240
>SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -3
Query: 381 SSTVRSKFWRACWSTSLALPFASVNAPCRLLDNSETCCTME--SEPSFSALF 232
++T+ + + W + +LP A C +D++ +C + S +S LF
Sbjct: 340 TATMSCQATNSAWMAATSLPPTPSEAVCECMDSTRSCVINDDVSSDDYSDLF 391
>SPBC56F2.05c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 397
Score = 25.0 bits (52), Expect = 8.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 584 CAPPPRASQSHRMPLSVLAPVSVRSDPC*RRLPSP 480
C+ PP + S R PLS+ P V+ LP P
Sbjct: 153 CSIPPILNSSDRSPLSLPTPYPVQYSTQPVSLPQP 187
>SPAC16A10.08c |mug74|SPAC589.01c|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 285
Score = 25.0 bits (52), Expect = 8.4
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +2
Query: 407 EKQATALHEKLQTAIQNTLKE--SQ-NLAKEVGVNMDQTSQKLAPKLKAAYD 553
EKQ HEK+ ++ LKE SQ N AK++ ++ +Q + K+ ++
Sbjct: 234 EKQRNTEHEKIIRRMKKELKELHSQFNFAKKLFISALSANQDILDKMNDEFN 285
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 25.0 bits (52), Expect = 8.4
Identities = 16/58 (27%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Frame = +2
Query: 92 ALAHGAM-VRRDAPNTILQDLEKHSQDFQKTISEQFNAIVNSKNTESLNKALKEGSDS 262
+L GA V ++ I K DF K I FN + L A+ E S +
Sbjct: 46 SLTDGAKSVAKERQKKISDPARKFFSDFSKLIDNSFNVFAKKNEGDLLQNAIYELSQA 103
>SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 310
Score = 25.0 bits (52), Expect = 8.4
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +2
Query: 236 KALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHP 400
+ ++E S++ + SE+S + A+TD + KE+ A ++ + +KA P
Sbjct: 30 REIEESLPSILGEKSEVSKPFKPAVTDPSNAKKEI-NMAIESPSKKATSPKKATP 83
>SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 240
Score = 25.0 bits (52), Expect = 8.4
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +2
Query: 176 KTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNS 295
KT+S++ + S+ T SLNKA K+ + + ++ +S S
Sbjct: 164 KTLSKRLLDLALSEKTHSLNKASKKSNKNGDKKRKHVSKS 203
>SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 659
Score = 25.0 bits (52), Expect = 8.4
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +3
Query: 363 WSAQSRISARRTPTSRNKPPHYTRSCKPP 449
+ QSR S S N PP+ TR+ P
Sbjct: 103 FEVQSRYSGALKEVSSNTPPNMTRAASQP 131
>SPCC24B10.08c |||histone acetyltransferase complex subunit Ada2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 437
Score = 25.0 bits (52), Expect = 8.4
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Frame = +2
Query: 332 KEVLQQARQNLERTVEDLRK-AHPDVEKQATALHEKLQTAIQ-NTLKESQNLAK---EVG 496
K + ++ R L +T R PD +K + HE++ Q + L+E + + E G
Sbjct: 242 KRMSKEERNLLNKTKAFARLLTGPDYQKFVNSYHEQITLKKQISDLQEWRQMGLTTLEQG 301
Query: 497 --VNMDQTSQKLAPKLKAAYDDFVKHAEEVHK 586
D+T + L K A+YD ++H + ++
Sbjct: 302 HKYERDKTQKFLLSKASASYDKQLRHVKSFNQ 333
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,170,751
Number of Sequences: 5004
Number of extensions: 40196
Number of successful extensions: 247
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 247
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 260219058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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