Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_N03
         (596 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       28   0.080
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    24   0.98 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    24   1.3  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    24   1.3  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   4.0  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              21   6.9  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              21   6.9  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 27.9 bits (59), Expect = 0.080
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -1

Query: 578 PPPRASQSHRMPLSVLAPVSVRSDPC*RRLPSPGSGSPL 462
           PPP    S   P+S+ A VS    P   +LP P +G+P+
Sbjct: 380 PPPNFGVSQVSPVSMSALVSAVRSPAGGQLP-PSAGAPM 417


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +2

Query: 218 NTESLNKALKEGSDSMVQQVSELSNS 295
           NTESL K+  +G+D   ++V ++ +S
Sbjct: 278 NTESLMKSENQGNDVQYERVQDVFDS 303


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 402 SGCALRRSSTVRSKFWRACWSTSLALPFASVNAPCRLLD 286
           +GC L   +  ++K+ RAC + SL L   +     R+LD
Sbjct: 366 AGCDLTIDNLRKAKYLRACITESLRL-IPTTTCIARILD 403


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 19/69 (27%), Positives = 29/69 (42%)
 Frame = +2

Query: 44  SDTAMAAKCFVLFACVALAHGAMVRRDAPNTILQDLEKHSQDFQKTISEQFNAIVNSKNT 223
           +D+ +AA+ FV F       G        +  L +L  + QD QK + E+ N      N 
Sbjct: 290 TDSLIAAQAFVFFLA-----GFETSSTTMSNALYELALN-QDVQKKLREEINTFCPKNNK 343

Query: 224 ESLNKALKE 250
           E     +KE
Sbjct: 344 ELKYDDIKE 352


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 250 RLRLHGAAGLRVIQQS 297
           RL++HG  GLRV   S
Sbjct: 564 RLKVHGIRGLRVADAS 579


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/43 (23%), Positives = 22/43 (51%)
 Frame = +2

Query: 365 ERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEV 493
           ++TV+D+ + + DVE +    + +      N + ES N  + +
Sbjct: 41  QQTVDDINEVNFDVEDEKPQRYNECILKQFNIVDESGNFKENI 83


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/43 (23%), Positives = 22/43 (51%)
 Frame = +2

Query: 365 ERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEV 493
           ++TV+D+ + + DVE +    + +      N + ES N  + +
Sbjct: 41  QQTVDDINEVNFDVEDEKPQRYNECILKQFNIVDESGNFKENI 83


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,845
Number of Sequences: 438
Number of extensions: 3008
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)