Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_N02
(377 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M63488-1|AAA36584.1| 616|Homo sapiens replication protein A, 70... 70 3e-12
BC018126-1|AAH18126.1| 616|Homo sapiens replication protein A1,... 70 3e-12
AY599563-1|AAS94324.1| 616|Homo sapiens replication protein A1,... 70 3e-12
AB209732-1|BAD92969.1| 630|Homo sapiens replication protein A1,... 70 3e-12
Z36715-1|CAA85309.1| 407|Homo sapiens Net protein. 29 5.0
CR542251-1|CAG47047.1| 407|Homo sapiens ELK3 protein. 29 5.0
BC017371-1|AAH17371.1| 407|Homo sapiens ELK3, ETS-domain protei... 29 5.0
X56838-1|CAA40168.1| 82|Homo sapiens glutathione transferase p... 29 6.6
M63509-1|AAA60963.1| 218|Homo sapiens glutathione transferase p... 29 6.6
BT019947-1|AAV38750.1| 218|Homo sapiens glutathione S-transfera... 29 6.6
BC110380-1|AAI10381.1| 218|Homo sapiens glutathione S-transfera... 29 6.6
BC105066-1|AAI05067.1| 218|Homo sapiens glutathione S-transfera... 29 6.6
BC105038-1|AAI05039.1| 218|Homo sapiens glutathione S-transfera... 29 6.6
>M63488-1|AAA36584.1| 616|Homo sapiens replication protein A,
70-kDa subunit protein.
Length = 616
Score = 69.7 bits (163), Expect = 3e-12
Identities = 31/86 (36%), Positives = 54/86 (62%)
Frame = +2
Query: 14 DQRVTAFNEVAEAMLGKSAEEIGRMFDYDKNAYGQVFDDVXXXXXXXXXXXXIETYSDEA 193
+Q VT F E AEA+LG++A +G + D ++ A+ +VF + +ETY+DE+
Sbjct: 526 NQWVTCFQESAEAILGQNAAYLGELKDKNEQAFEEVFQNANFRSFIFRVRVKVETYNDES 585
Query: 194 RLKTVIMNAQPVDYKDGNAKLLKSIK 271
R+K +M+ +PVDY++ +L+ SI+
Sbjct: 586 RIKATVMDVKPVDYREYGRRLVMSIR 611
>BC018126-1|AAH18126.1| 616|Homo sapiens replication protein A1,
70kDa protein.
Length = 616
Score = 69.7 bits (163), Expect = 3e-12
Identities = 31/86 (36%), Positives = 54/86 (62%)
Frame = +2
Query: 14 DQRVTAFNEVAEAMLGKSAEEIGRMFDYDKNAYGQVFDDVXXXXXXXXXXXXIETYSDEA 193
+Q VT F E AEA+LG++A +G + D ++ A+ +VF + +ETY+DE+
Sbjct: 526 NQWVTCFQESAEAILGQNAAYLGELKDKNEQAFEEVFQNANFRSFIFRVRVKVETYNDES 585
Query: 194 RLKTVIMNAQPVDYKDGNAKLLKSIK 271
R+K +M+ +PVDY++ +L+ SI+
Sbjct: 586 RIKATVMDVKPVDYREYGRRLVMSIR 611
>AY599563-1|AAS94324.1| 616|Homo sapiens replication protein A1,
70kDa protein.
Length = 616
Score = 69.7 bits (163), Expect = 3e-12
Identities = 31/86 (36%), Positives = 54/86 (62%)
Frame = +2
Query: 14 DQRVTAFNEVAEAMLGKSAEEIGRMFDYDKNAYGQVFDDVXXXXXXXXXXXXIETYSDEA 193
+Q VT F E AEA+LG++A +G + D ++ A+ +VF + +ETY+DE+
Sbjct: 526 NQWVTCFQESAEAILGQNAAYLGELKDKNEQAFEEVFQNANFRSFIFRVRVKVETYNDES 585
Query: 194 RLKTVIMNAQPVDYKDGNAKLLKSIK 271
R+K +M+ +PVDY++ +L+ SI+
Sbjct: 586 RIKATVMDVKPVDYREYGRRLVMSIR 611
>AB209732-1|BAD92969.1| 630|Homo sapiens replication protein A1,
70kDa variant protein.
Length = 630
Score = 69.7 bits (163), Expect = 3e-12
Identities = 31/86 (36%), Positives = 54/86 (62%)
Frame = +2
Query: 14 DQRVTAFNEVAEAMLGKSAEEIGRMFDYDKNAYGQVFDDVXXXXXXXXXXXXIETYSDEA 193
+Q VT F E AEA+LG++A +G + D ++ A+ +VF + +ETY+DE+
Sbjct: 540 NQWVTCFQESAEAILGQNAAYLGELKDKNEQAFEEVFQNANFRSFIFRVRVKVETYNDES 599
Query: 194 RLKTVIMNAQPVDYKDGNAKLLKSIK 271
R+K +M+ +PVDY++ +L+ SI+
Sbjct: 600 RIKATVMDVKPVDYREYGRRLVMSIR 625
>Z36715-1|CAA85309.1| 407|Homo sapiens Net protein.
Length = 407
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -3
Query: 132 TSSKTCPYAFLS*SNMRPISSALLPNIASATSLNAVTRWSPA 7
TS AFL+ S ISS +LPN AS +S + + SP+
Sbjct: 204 TSEAAAASAFLASSVSAKISSLMLPNAASISSASPFSSRSPS 245
>CR542251-1|CAG47047.1| 407|Homo sapiens ELK3 protein.
Length = 407
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -3
Query: 132 TSSKTCPYAFLS*SNMRPISSALLPNIASATSLNAVTRWSPA 7
TS AFL+ S ISS +LPN AS +S + + SP+
Sbjct: 204 TSEAAAASAFLASSVSAKISSLMLPNAASISSASPFSSRSPS 245
>BC017371-1|AAH17371.1| 407|Homo sapiens ELK3, ETS-domain protein
(SRF accessory protein 2) protein.
Length = 407
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -3
Query: 132 TSSKTCPYAFLS*SNMRPISSALLPNIASATSLNAVTRWSPA 7
TS AFL+ S ISS +LPN AS +S + + SP+
Sbjct: 204 TSEAAAASAFLASSVSAKISSLMLPNAASISSASPFSSRSPS 245
>X56838-1|CAA40168.1| 82|Homo sapiens glutathione transferase
protein.
Length = 82
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -2
Query: 238 FVIDGL-RVHYYSFQSRFVAVRFNLSAEPERERFEFDIIEN 119
++IDG ++ + R++A + NL E E+E+ DI+EN
Sbjct: 24 YLIDGTHKITQSNAILRYIARKHNLCGESEKEQIREDILEN 64
>M63509-1|AAA60963.1| 218|Homo sapiens glutathione transferase
protein.
Length = 218
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -2
Query: 238 FVIDGL-RVHYYSFQSRFVAVRFNLSAEPERERFEFDIIEN 119
++IDG ++ + R++A + NL E E+E+ DI+EN
Sbjct: 62 YLIDGTHKITQSNAILRYIARKHNLCGESEKEQIREDILEN 102
>BT019947-1|AAV38750.1| 218|Homo sapiens glutathione S-transferase
M1 protein.
Length = 218
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -2
Query: 238 FVIDGL-RVHYYSFQSRFVAVRFNLSAEPERERFEFDIIEN 119
++IDG ++ + R++A + NL E E+E+ DI+EN
Sbjct: 62 YLIDGTHKITQSNAILRYIARKHNLCGESEKEQIREDILEN 102
>BC110380-1|AAI10381.1| 218|Homo sapiens glutathione S-transferase
M2 (muscle) protein.
Length = 218
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -2
Query: 238 FVIDGL-RVHYYSFQSRFVAVRFNLSAEPERERFEFDIIEN 119
++IDG ++ + R++A + NL E E+E+ DI+EN
Sbjct: 62 YLIDGTHKITQSNAILRYIARKHNLCGESEKEQIREDILEN 102
>BC105066-1|AAI05067.1| 218|Homo sapiens glutathione S-transferase
M2 (muscle) protein.
Length = 218
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -2
Query: 238 FVIDGL-RVHYYSFQSRFVAVRFNLSAEPERERFEFDIIEN 119
++IDG ++ + R++A + NL E E+E+ DI+EN
Sbjct: 62 YLIDGTHKITQSNAILRYIARKHNLCGESEKEQIREDILEN 102
>BC105038-1|AAI05039.1| 218|Homo sapiens glutathione S-transferase
M2 (muscle) protein.
Length = 218
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -2
Query: 238 FVIDGL-RVHYYSFQSRFVAVRFNLSAEPERERFEFDIIEN 119
++IDG ++ + R++A + NL E E+E+ DI+EN
Sbjct: 62 YLIDGTHKITQSNAILRYIARKHNLCGESEKEQIREDILEN 102
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,800,296
Number of Sequences: 237096
Number of extensions: 565974
Number of successful extensions: 1174
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1174
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2536788584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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