Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_M24
(539 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024859-27|AAK29978.4| 337|Caenorhabditis elegans Hypothetical... 244 2e-65
Z81030-8|CAB02716.1| 421|Caenorhabditis elegans Hypothetical pr... 70 1e-12
AF125450-1|AAD12815.1| 188|Caenorhabditis elegans Hypothetical ... 33 0.17
AL022288-4|CAA18365.1| 461|Caenorhabditis elegans Hypothetical ... 28 3.7
Z81096-8|CAD54149.2| 922|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z81096-6|CAJ80827.1| 691|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z81096-5|CAD54150.1| 507|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z81096-4|CAB54264.2| 689|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z81096-3|CAB54265.2| 747|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z78065-11|CAD54155.2| 922|Caenorhabditis elegans Hypothetical p... 27 6.5
Z78065-10|CAJ80826.1| 691|Caenorhabditis elegans Hypothetical p... 27 6.5
Z78065-8|CAD54156.1| 507|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z78065-7|CAB54297.2| 689|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z78065-6|CAB54298.2| 747|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z78065-1|CAD54154.1| 547|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z79604-3|CAD36502.1| 817|Caenorhabditis elegans Hypothetical pr... 27 8.6
AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical ... 27 8.6
AF332205-1|AAK17976.1| 817|Caenorhabditis elegans nuclear recep... 27 8.6
AC199169-2|ABO33254.1| 319|Caenorhabditis elegans Hypothetical ... 27 8.6
>AC024859-27|AAK29978.4| 337|Caenorhabditis elegans Hypothetical
protein Y71H2AM.1 protein.
Length = 337
Score = 244 bits (598), Expect = 2e-65
Identities = 113/174 (64%), Positives = 141/174 (81%), Gaps = 2/174 (1%)
Frame = +1
Query: 19 MVVAIGFEGSANKLGIGIVRDGEILANCRRTYITPPGLGFLPRETAEHHQRNIHDLLKQA 198
MV IG EGSANK+G+GI+RDG +L+N R T+ PPG GF P ETA+HH++ I L+ +A
Sbjct: 1 MVCVIGIEGSANKIGVGIIRDGVVLSNPRATFHAPPGEGFRPTETAQHHRQQIVRLVGEA 60
Query: 199 FEDSGL-TPK-DIDVVCYTKGPGMGAPLMVCAIVARTCAKLWNKPILGVNHCIGHIEMGR 372
+ + + P+ +ID + YTKGPGMGAPL V AIVART + W KPI+ VNHC+GHIEMGR
Sbjct: 61 IKLANIQNPELEIDGIAYTKGPGMGAPLQVGAIVARTLSLTWKKPIIPVNHCVGHIEMGR 120
Query: 373 LITKAENPIVLYVSGGNTQIIAYSRKRYRIFGETIDMAVGNCLDRFARVFKMSN 534
LIT A+NP+VLYVSGGNTQ+I+Y++KRYRIFGETID+AVGNCLDRFARV K+ N
Sbjct: 121 LITGADNPVVLYVSGGNTQVISYTKKRYRIFGETIDIAVGNCLDRFARVLKLPN 174
>Z81030-8|CAB02716.1| 421|Caenorhabditis elegans Hypothetical
protein C01G10.10 protein.
Length = 421
Score = 69.7 bits (163), Expect = 1e-12
Identities = 50/174 (28%), Positives = 86/174 (49%), Gaps = 6/174 (3%)
Frame = +1
Query: 13 NIMVVAIGFEGSANKLGIGIVRDG-EILANCRRTY--ITPPGLGFLPRETAEHHQRNIHD 183
N V +G E S + + IV + EIL++ R T I G P A H+ N+
Sbjct: 20 NYSVKVLGIETSCDDTAVAIVNEKREILSSERYTERAIQRQQGGINPSVCALQHRENLPR 79
Query: 184 LLKQAFEDSGLTPKDIDVVCYTKGPGMGAPLMVCAIVARTCAKLWNKPILGVNHCIGHIE 363
L+++ D+G +PKD+D V T PG+ L A AK P++ V+H H
Sbjct: 80 LIEKCLNDAGTSPKDLDAVAVTVTPGLVIALKEGISAAIGFAKKHRLPLIPVHHMRAHAL 139
Query: 364 MGRLITKAEN-PI-VLYVSGGNTQI-IAYSRKRYRIFGETIDMAVGNCLDRFAR 516
L+ + P + +SGG+ I +A ++++++G+++ + G C+D+ AR
Sbjct: 140 SILLVDDSVRFPFSAVLLSGGHALISVAEDVEKFKLYGQSVSGSPGECIDKVAR 193
>AF125450-1|AAD12815.1| 188|Caenorhabditis elegans Hypothetical
protein Y39F10A.1 protein.
Length = 188
Score = 32.7 bits (71), Expect = 0.17
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 199 FEDSGLTPKDIDVVCYTKGPGMGAPLMVCAIVARTCAKLW-NKPILGVNHCIGHIE 363
F D + P D ++C+T+G L VC+ ++C LW K +G + HI+
Sbjct: 72 FSDYSIRPHDDHLLCHTRG---AVGLCVCSSTQQSCHDLWPTKGSIGPKNMTTHIK 124
>AL022288-4|CAA18365.1| 461|Caenorhabditis elegans Hypothetical
protein ZK1025.7 protein.
Length = 461
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 106 RTYITPPGLGFLPRETAEHHQRNIHDLLKQAFEDS 210
R I F P +TA H RN+HD + + FE+S
Sbjct: 370 RAKIVRKSYRFFPNDTAGHI-RNMHDTMNKIFENS 403
>Z81096-8|CAD54149.2| 922|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 922
Score = 27.5 bits (58), Expect = 6.5
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = -3
Query: 528 HFENSSKSV*TITHSHIYGFSKDPISFSGVSNNLCIATTDI*HNWIFSFRYQSAHFNMTN 349
H S ++ ++HS G +K SFS + N DI N S R Q+ H M
Sbjct: 764 HSTLGSHNMSPLSHSKSSGLTK---SFSNFALNSSKQRDDITANMSRSIREQNRHITMCR 820
Query: 348 AMV 340
AMV
Sbjct: 821 AMV 823
>Z81096-6|CAJ80827.1| 691|Caenorhabditis elegans Hypothetical
protein T09E8.1f protein.
Length = 691
Score = 27.5 bits (58), Expect = 6.5
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = -3
Query: 528 HFENSSKSV*TITHSHIYGFSKDPISFSGVSNNLCIATTDI*HNWIFSFRYQSAHFNMTN 349
H S ++ ++HS G +K SFS + N DI N S R Q+ H M
Sbjct: 533 HSTLGSHNMSPLSHSKSSGLTK---SFSNFALNSSKQRDDITANMSRSIREQNRHITMCR 589
Query: 348 AMV 340
AMV
Sbjct: 590 AMV 592
>Z81096-5|CAD54150.1| 507|Caenorhabditis elegans Hypothetical
protein T09E8.1e protein.
Length = 507
Score = 27.5 bits (58), Expect = 6.5
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = -3
Query: 528 HFENSSKSV*TITHSHIYGFSKDPISFSGVSNNLCIATTDI*HNWIFSFRYQSAHFNMTN 349
H S ++ ++HS G +K SFS + N DI N S R Q+ H M
Sbjct: 349 HSTLGSHNMSPLSHSKSSGLTK---SFSNFALNSSKQRDDITANMSRSIREQNRHITMCR 405
Query: 348 AMV 340
AMV
Sbjct: 406 AMV 408
>Z81096-4|CAB54264.2| 689|Caenorhabditis elegans Hypothetical
protein T09E8.1b protein.
Length = 689
Score = 27.5 bits (58), Expect = 6.5
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = -3
Query: 528 HFENSSKSV*TITHSHIYGFSKDPISFSGVSNNLCIATTDI*HNWIFSFRYQSAHFNMTN 349
H S ++ ++HS G +K SFS + N DI N S R Q+ H M
Sbjct: 531 HSTLGSHNMSPLSHSKSSGLTK---SFSNFALNSSKQRDDITANMSRSIREQNRHITMCR 587
Query: 348 AMV 340
AMV
Sbjct: 588 AMV 590
>Z81096-3|CAB54265.2| 747|Caenorhabditis elegans Hypothetical
protein T09E8.1a protein.
Length = 747
Score = 27.5 bits (58), Expect = 6.5
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = -3
Query: 528 HFENSSKSV*TITHSHIYGFSKDPISFSGVSNNLCIATTDI*HNWIFSFRYQSAHFNMTN 349
H S ++ ++HS G +K SFS + N DI N S R Q+ H M
Sbjct: 589 HSTLGSHNMSPLSHSKSSGLTK---SFSNFALNSSKQRDDITANMSRSIREQNRHITMCR 645
Query: 348 AMV 340
AMV
Sbjct: 646 AMV 648
>Z78065-11|CAD54155.2| 922|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 922
Score = 27.5 bits (58), Expect = 6.5
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = -3
Query: 528 HFENSSKSV*TITHSHIYGFSKDPISFSGVSNNLCIATTDI*HNWIFSFRYQSAHFNMTN 349
H S ++ ++HS G +K SFS + N DI N S R Q+ H M
Sbjct: 764 HSTLGSHNMSPLSHSKSSGLTK---SFSNFALNSSKQRDDITANMSRSIREQNRHITMCR 820
Query: 348 AMV 340
AMV
Sbjct: 821 AMV 823
>Z78065-10|CAJ80826.1| 691|Caenorhabditis elegans Hypothetical
protein T09E8.1f protein.
Length = 691
Score = 27.5 bits (58), Expect = 6.5
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = -3
Query: 528 HFENSSKSV*TITHSHIYGFSKDPISFSGVSNNLCIATTDI*HNWIFSFRYQSAHFNMTN 349
H S ++ ++HS G +K SFS + N DI N S R Q+ H M
Sbjct: 533 HSTLGSHNMSPLSHSKSSGLTK---SFSNFALNSSKQRDDITANMSRSIREQNRHITMCR 589
Query: 348 AMV 340
AMV
Sbjct: 590 AMV 592
>Z78065-8|CAD54156.1| 507|Caenorhabditis elegans Hypothetical
protein T09E8.1e protein.
Length = 507
Score = 27.5 bits (58), Expect = 6.5
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = -3
Query: 528 HFENSSKSV*TITHSHIYGFSKDPISFSGVSNNLCIATTDI*HNWIFSFRYQSAHFNMTN 349
H S ++ ++HS G +K SFS + N DI N S R Q+ H M
Sbjct: 349 HSTLGSHNMSPLSHSKSSGLTK---SFSNFALNSSKQRDDITANMSRSIREQNRHITMCR 405
Query: 348 AMV 340
AMV
Sbjct: 406 AMV 408
>Z78065-7|CAB54297.2| 689|Caenorhabditis elegans Hypothetical
protein T09E8.1b protein.
Length = 689
Score = 27.5 bits (58), Expect = 6.5
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = -3
Query: 528 HFENSSKSV*TITHSHIYGFSKDPISFSGVSNNLCIATTDI*HNWIFSFRYQSAHFNMTN 349
H S ++ ++HS G +K SFS + N DI N S R Q+ H M
Sbjct: 531 HSTLGSHNMSPLSHSKSSGLTK---SFSNFALNSSKQRDDITANMSRSIREQNRHITMCR 587
Query: 348 AMV 340
AMV
Sbjct: 588 AMV 590
>Z78065-6|CAB54298.2| 747|Caenorhabditis elegans Hypothetical
protein T09E8.1a protein.
Length = 747
Score = 27.5 bits (58), Expect = 6.5
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = -3
Query: 528 HFENSSKSV*TITHSHIYGFSKDPISFSGVSNNLCIATTDI*HNWIFSFRYQSAHFNMTN 349
H S ++ ++HS G +K SFS + N DI N S R Q+ H M
Sbjct: 589 HSTLGSHNMSPLSHSKSSGLTK---SFSNFALNSSKQRDDITANMSRSIREQNRHITMCR 645
Query: 348 AMV 340
AMV
Sbjct: 646 AMV 648
>Z78065-1|CAD54154.1| 547|Caenorhabditis elegans Hypothetical
protein T09E8.1d protein.
Length = 547
Score = 27.5 bits (58), Expect = 6.5
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = -3
Query: 528 HFENSSKSV*TITHSHIYGFSKDPISFSGVSNNLCIATTDI*HNWIFSFRYQSAHFNMTN 349
H S ++ ++HS G +K SFS + N DI N S R Q+ H M
Sbjct: 389 HSTLGSHNMSPLSHSKSSGLTK---SFSNFALNSSKQRDDITANMSRSIREQNRHITMCR 445
Query: 348 AMV 340
AMV
Sbjct: 446 AMV 448
>Z79604-3|CAD36502.1| 817|Caenorhabditis elegans Hypothetical
protein ZK662.3b protein.
Length = 817
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1
Query: 86 SPSLTMPIPSLLALPSKPIATTIIF 12
SPS T+ IP+ + + KPI T ++F
Sbjct: 301 SPSNTVTIPAAVDVERKPIPTNVLF 325
>AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical
protein Y113G7C.1 protein.
Length = 1494
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 361 EMGRLITKAENPIVLYVSGGNTQIIAYSRKRY 456
E+ L+ K+ENPIV++ S G + A+ Y
Sbjct: 1349 ELMELVKKSENPIVVHCSAGIGRTTAFIGTEY 1380
>AF332205-1|AAK17976.1| 817|Caenorhabditis elegans nuclear receptor
NHR-48 protein.
Length = 817
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1
Query: 86 SPSLTMPIPSLLALPSKPIATTIIF 12
SPS T+ IP+ + + KPI T ++F
Sbjct: 301 SPSNTVTIPAAVDVERKPIPTNVLF 325
>AC199169-2|ABO33254.1| 319|Caenorhabditis elegans Hypothetical
protein F38A1.15 protein.
Length = 319
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +1
Query: 355 HIEMGRLITKAENPIVLYVSGGNTQIIAYSRKRYRIFGETIDMAVGN 495
++E+ I + + +Y GNT+I + K +GET + V +
Sbjct: 205 YVEVRNFIGSGQTALNMYTYNGNTRIKVQTEKSPYTYGETFKIYVNS 251
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,280,972
Number of Sequences: 27780
Number of extensions: 330968
Number of successful extensions: 695
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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