Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_M21
         (574 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              25   0.40 
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              23   1.6  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    23   2.1  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    22   3.8  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    22   3.8  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   3.8  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    21   6.6  

>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 25.4 bits (53), Expect = 0.40
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 143 NVYQYRHCGLKKFNLID 193
           NV  Y  C +KKFN++D
Sbjct: 58  NVQSYVECMMKKFNVVD 74


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 143 NVYQYRHCGLKKFNLID 193
           NV  +  C +KKFN++D
Sbjct: 58  NVLLFIECTMKKFNVVD 74


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -1

Query: 466 IVRSLKNLYSMTVISNLYNINI*QQMSPFKCF 371
           I+ S K  + ++ + ++Y  N  +QM  F CF
Sbjct: 24  ILCSQKAGFDLSDLKSMYEANSEEQMKKFGCF 55


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -1

Query: 139 NFPFLYRDFYENFKVNLEEI 80
           N+   Y+  Y+N+ +N+E+I
Sbjct: 108 NYNNNYKKLYKNYIINIEQI 127


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -1

Query: 139 NFPFLYRDFYENFKVNLEEI 80
           N+   Y+  Y+N+ +N+E+I
Sbjct: 108 NYNNNYKKLYKNYIINIEQI 127


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +1

Query: 451 LDYGQCSNKWWRSVKTFVIFPIHFI 525
           L  GQ +  WW++   + ++P  F+
Sbjct: 15  LGAGQNNKGWWKNAIFYQVYPRSFM 39


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -1

Query: 466 IVRSLKNLYSMTVISNLYNINI*QQMSPFKCFLINL 359
           I+ SL N Y+    +  YN N   +   +K ++IN+
Sbjct: 314 IISSLSNNYNYNNNNYKYNYNNYNKKLYYKNYIINI 349


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,256
Number of Sequences: 438
Number of extensions: 3288
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)