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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_M19
         (419 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1174 - 26696869-26698191                                         33   0.12 
10_08_0141 + 15159160-15159306,15159708-15159815,15159958-151600...    32   0.22 
03_05_0543 - 25404630-25405408,25405461-25405605                       32   0.22 
12_02_0318 - 17457182-17462232,17462745-17462955,17463356-174634...    31   0.28 
07_01_1032 - 8947594-8947769,8947885-8948601,8948973-8949049,894...    31   0.50 
03_06_0443 + 33973229-33973311,33973422-33973510,33974873-339750...    31   0.50 
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457           30   0.66 
01_01_0229 - 1943473-1943922                                           30   0.87 
03_02_0478 + 8775892-8776377                                           29   1.1  
01_01_0231 + 1951047-1951499                                           29   1.1  
11_01_0618 - 4941906-4942118,4942231-4942343,4942534-4942651,494...    29   1.5  
03_02_0485 - 8808139-8808618                                           29   1.5  
03_02_0484 + 8805053-8805538                                           29   1.5  
03_02_0483 - 8804021-8804485                                           29   2.0  
01_01_0227 + 1933247-1933699                                           29   2.0  
01_07_0105 - 41104655-41104851,41105818-41107150                       28   2.7  
08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034     28   3.5  
06_03_0073 + 16229369-16230115,16230182-16230431,16230618-162307...    28   3.5  
02_05_0094 - 25758213-25758479,25758886-25758975,25759090-257591...    28   3.5  
09_03_0127 + 12573429-12574857,12575269-12575903                       27   4.6  
05_05_0237 - 23526613-23527178,23527979-23528066,23528384-235285...    27   4.6  
12_01_0222 - 1675077-1675289,1675476-1675553,1675943-1676002,167...    27   6.1  
11_01_0221 - 1720952-1721164,1721351-1721428,1721836-1721895,172...    27   6.1  
05_06_0037 + 25095452-25096049,25097093-25097280,25097926-25098429     27   6.1  
02_02_0077 - 6586638-6587165                                           27   6.1  
11_06_0346 - 22549699-22549721,22549857-22549999,22550100-225521...    27   8.1  
02_01_0200 + 1344755-1345115,1346229-1346366,1346505-1346752           27   8.1  
01_07_0096 - 41059668-41059886,41059978-41060154,41060575-410607...    27   8.1  
01_03_0151 - 13229861-13230347,13230442-13230540,13230701-132309...    27   8.1  

>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 32.7 bits (71), Expect = 0.12
 Identities = 19/68 (27%), Positives = 35/68 (51%)
 Frame = +1

Query: 202 KADKSKFQVNLDVQHFAPEEISVKTVDGFIVIEANHEEKMDEHGWVSRKFSRRYQLPEGC 381
           +A + +  V + +  F  E++ V+ VD   ++ A  E      G    +F +  +LP+ C
Sbjct: 18  QAGEEQDVVEIALPGFRKEQVRVQ-VDNHGMLRATGERPPAARGGRWVRFKKDLRLPDNC 76

Query: 382 DVDAVQSR 405
           D DAV++R
Sbjct: 77  DADAVRAR 84


>10_08_0141 + 15159160-15159306,15159708-15159815,15159958-15160006,
            15160067-15160182,15160358-15160399,15161026-15161442,
            15162356-15162509,15162911-15162975,15163793-15163870,
            15163951-15164061,15164227-15164271,15164677-15164850,
            15165383-15166335,15166471-15166681,15167037-15167196,
            15168786-15169174
          Length = 1072

 Score = 31.9 bits (69), Expect = 0.22
 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = +1

Query: 235  DVQHFAPEEISVKTVDGF--IVIEANHEEKMDEHGWVSRKFSRRYQLPEGCDVDAVQSRL 408
            D+Q +  E I V+ V     +V+        + + W   +F  ++ +P+GCD+ A+Q+RL
Sbjct: 941  DIQGYKKEHIKVQLVRSRRRLVVSGECPVAGETNRW--SRFRLQFPVPDGCDLKAIQARL 998


>03_05_0543 - 25404630-25405408,25405461-25405605
          Length = 307

 Score = 31.9 bits (69), Expect = 0.22
 Identities = 18/68 (26%), Positives = 34/68 (50%)
 Frame = +1

Query: 214 SKFQVNLDVQHFAPEEISVKTVDGFIVIEANHEEKMDEHGWVSRKFSRRYQLPEGCDVDA 393
           +   ++LD   F  EEI V  VD    +    E  +  + W   +F + +QLP  C+VD 
Sbjct: 39  NSIHLSLDQLGFKREEIRV-LVDNHGHLRTRGERPVAGNRW--SRFQKDFQLPADCNVDG 95

Query: 394 VQSRLSSD 417
           ++++  ++
Sbjct: 96  IRAKFENE 103


>12_02_0318 - 17457182-17462232,17462745-17462955,17463356-17463403,
            17466161-17466346
          Length = 1831

 Score = 31.5 bits (68), Expect = 0.28
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = -1

Query: 185  SWRRFESCFQGP*NFLDGCGLTRLRTSSGVRARANCLLFRSLGRSISRRYG 33
            SW+   S    P NF+    L  ++T++G R   NCLLF     S+ R  G
Sbjct: 1360 SWKMLGSAL--PDNFMSSINLRWVKTTAGYRHPKNCLLFGPACSSLHRDDG 1408


>07_01_1032 -
           8947594-8947769,8947885-8948601,8948973-8949049,
           8949264-8949655,8949746-8950002,8950234-8950921
          Length = 768

 Score = 30.7 bits (66), Expect = 0.50
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +1

Query: 190 GSTIKADKSKFQVN-LDVQHFAPEEISVKTVDGFIVIEA 303
           G  +K + ++F  N + +Q F  E ISV  VDGF+ I A
Sbjct: 407 GELVKWNATRFGTNCMFLQSFLKEAISVHAVDGFLYIHA 445


>03_06_0443 +
           33973229-33973311,33973422-33973510,33974873-33975024,
           33975463-33975579,33975729-33975776,33976169-33976312,
           33976715-33976858
          Length = 258

 Score = 30.7 bits (66), Expect = 0.50
 Identities = 26/83 (31%), Positives = 41/83 (49%)
 Frame = -3

Query: 318 LLFMISLNDDKSVNGFHGDLLWSEVLHIKIDLKLALVGFDGRARVVEEVRELFPRPIELF 139
           LL  + +++DK + G  G    S+ LHI I+ +      D R R  +EV E   +P+   
Sbjct: 156 LLVALLISEDK-LRGKPGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKPV--- 211

Query: 138 RRLRTDET*DFFGRQSEGELLVV 70
                DE+ DF+ RQ   EL ++
Sbjct: 212 -----DESQDFYKRQQLRELAML 229


>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
          Length = 438

 Score = 30.3 bits (65), Expect = 0.66
 Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
 Frame = +1

Query: 235 DVQHFAPEEISVKTVDGFIVIEANH-----EEKMDEHGWVSR---KFSRRYQLPEGCDVD 390
           D+     EE+ V+  +G +++ +       E+K D+   V R   +F RR++LPE   VD
Sbjct: 59  DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 118

Query: 391 AVQSRLSS 414
            V++ L +
Sbjct: 119 QVKAGLEN 126


>01_01_0229 - 1943473-1943922
          Length = 149

 Score = 29.9 bits (64), Expect = 0.87
 Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
 Frame = +1

Query: 235 DVQHFAPEEISVKTVDGFIVIEANH-----EEKMDEHGWVSR---KFSRRYQLPEGCDVD 390
           D+     EE+ V+  +G +++ +       E+K D+   V R   +F RR++LPE   VD
Sbjct: 58  DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 117

Query: 391 AVQSRLSS 414
            V++ + +
Sbjct: 118 QVKASMEN 125


>03_02_0478 + 8775892-8776377
          Length = 161

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
 Frame = +1

Query: 235 DVQHFAPEEISVKTVDGFIVI---EAN--HEEKMDEHGWVSR---KFSRRYQLPEGCDVD 390
           DV     EE+ V+  DG I+    E N   EEK D+   V R   KF RR++LP+    +
Sbjct: 70  DVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPE 129

Query: 391 AVQSRLSS 414
            +++ + +
Sbjct: 130 QIKASMEN 137


>01_01_0231 + 1951047-1951499
          Length = 150

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
 Frame = +1

Query: 235 DVQHFAPEEISVKTVDGFIVIEANH-----EEKMDEHGWVSR---KFSRRYQLPEGCDVD 390
           D+     EE+ V+  +G +++ +       E+K D+   V R   +F RR++LPE   VD
Sbjct: 59  DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 118

Query: 391 AVQSRLSS 414
            V++ + +
Sbjct: 119 QVKAGMEN 126


>11_01_0618 -
           4941906-4942118,4942231-4942343,4942534-4942651,
           4942762-4942881,4942964-4943101,4943392-4943517,
           4943659-4943847,4943951-4944238,4944344-4944374,
           4945014-4945216
          Length = 512

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
 Frame = +1

Query: 142 KFYGPW----KQLSNLLHDSGSTIKADKSKFQVNLD-VQHFAPEEISVK 273
           +FY PW    K+L+ +L ++ +T+K+DK      +D   +  P E  V+
Sbjct: 408 EFYAPWCGHCKKLAPILDEAATTLKSDKDVVIAKMDATANDVPSEFDVQ 456


>03_02_0485 - 8808139-8808618
          Length = 159

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
 Frame = +1

Query: 235 DVQHFAPEEISVKTVDGFIVI-----EANHEEKMDEHGWVSR---KFSRRYQLPEGCDVD 390
           DV     EE+ V+  DG I+          EEK D+   V R   KF RR++LPE    +
Sbjct: 68  DVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPE 127

Query: 391 AVQSRLSS 414
            +++ + +
Sbjct: 128 QIKASMEN 135


>03_02_0484 + 8805053-8805538
          Length = 161

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
 Frame = +1

Query: 235 DVQHFAPEEISVKTVDGFIVI-----EANHEEKMDEHGWVSR---KFSRRYQLPEGCDVD 390
           DV     EE+ V+  DG ++          EEK D+   V R   KF RR++LPE    +
Sbjct: 70  DVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 129

Query: 391 AVQSRLSS 414
            +++ + +
Sbjct: 130 QIKASMEN 137


>03_02_0483 - 8804021-8804485
          Length = 154

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
 Frame = +1

Query: 235 DVQHFAPEEISVKTVDGFIVIEANH-----EEKMDEHGWVSR---KFSRRYQLPEGCDVD 390
           DV     EE+ V+  DG ++  +       EEK D+   V R   KF RR++LPE    +
Sbjct: 63  DVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 122

Query: 391 AVQSRLSS 414
            +++ + +
Sbjct: 123 QIKASMEN 130


>01_01_0227 + 1933247-1933699
          Length = 150

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +1

Query: 295 IEANHEEKMDEHGWVSRKFSRRYQLPEGCDVDAVQSRLSS 414
           ++  ++E+       S KF RR++LP G  VD V + + +
Sbjct: 87  VDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASMDN 126


>01_07_0105 - 41104655-41104851,41105818-41107150
          Length = 509

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 21/81 (25%), Positives = 37/81 (45%)
 Frame = +1

Query: 103 EEVLSLVSPQPSKKFYGPWKQLSNLLHDSGSTIKADKSKFQVNLDVQHFAPEEISVKTVD 282
           EEV  L  P  SK   G  + ++ +  D     K + S    N++  +   EEI V+  +
Sbjct: 331 EEVAQLEQPSSSKSNNGEMEAVAGV--DQAEDAKKETS----NIEAINVEQEEIKVEEEE 384

Query: 283 GFIVIEANHEEKMDEHGWVSR 345
             I++    EE+ ++   +SR
Sbjct: 385 EKIIVSQETEEEEEKSAVISR 405


>08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034
          Length = 930

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +2

Query: 275 PLTDLSSLRLIMKRRWMSTDGC 340
           PL+DL S RL  +R + S DGC
Sbjct: 327 PLSDLDSQRLFFRRIFGSDDGC 348


>06_03_0073 +
           16229369-16230115,16230182-16230431,16230618-16230728,
           16230768-16231153
          Length = 497

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 14/47 (29%), Positives = 20/47 (42%)
 Frame = -1

Query: 143 FLDGCGLTRLRTSSGVRARANCLLFRSLGRSISRRYGNRDIFTLWPR 3
           FL+ C +  ++  S    R    LF  LGR+    Y NR     W +
Sbjct: 107 FLETCSMYTIKGVSPDAVRLRLFLFSLLGRAKQWFYANRAAINTWDK 153


>02_05_0094 -
           25758213-25758479,25758886-25758975,25759090-25759118,
           25759208-25759307,25759411-25759545
          Length = 206

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +1

Query: 274 TVDGFIVIEANHEEKMDEHGWVSRKFSRRYQLPEGCDVDAVQSRLSS 414
           ++DG +  + + E+   E G  S+KFS+  +  E  D     S+LSS
Sbjct: 51  SMDGVLYCKTHFEQLFKETGSFSKKFSQGGKSSEKSDQGRAPSKLSS 97


>09_03_0127 + 12573429-12574857,12575269-12575903
          Length = 687

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 17/70 (24%), Positives = 33/70 (47%)
 Frame = -3

Query: 375 FRQLVSP*KLSRHPSVLIHLLFMISLNDDKSVNGFHGDLLWSEVLHIKIDLKLALVGFDG 196
           FR+ +     +RHP+VL  L F  ++ +   V  F G    +++LH  I+     + +  
Sbjct: 431 FRRRMERVGKARHPAVLPPLAFYCAMQEKLVVYEFLGHGSLAKLLHGSIESSQVALDWPA 490

Query: 195 RARVVEEVRE 166
           R  +  +V +
Sbjct: 491 RLHIASKVAD 500


>05_05_0237 -
           23526613-23527178,23527979-23528066,23528384-23528527,
           23528674-23528790,23528860-23528970,23530911-23531062,
           23531362-23531450,23531664-23531761
          Length = 454

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 21/79 (26%), Positives = 36/79 (45%)
 Frame = -3

Query: 297 NDDKSVNGFHGDLLWSEVLHIKIDLKLALVGFDGRARVVEEVRELFPRPIELFRRLRTDE 118
           N ++ + G  G     + LHI I+ +L     D R    +E+ E   +P+        DE
Sbjct: 188 NKEEQLKGRAGYEHLDDPLHILIEAELPANVIDARLAKAQEILEELLKPV--------DE 239

Query: 117 T*DFFGRQSEGELLVV*EP 61
           + D++ RQ   EL ++  P
Sbjct: 240 SQDYYKRQQLRELALLNSP 258


>12_01_0222 - 1675077-1675289,1675476-1675553,1675943-1676002,
            1676103-1676206,1676321-1676479,1676768-1676894,
            1677569-1677736,1677890-1678000,1678090-1678243,
            1678409-1678744,1678854-1679038,1679141-1679239,
            1679376-1679639,1679776-1679952,1680351-1680644,
            1680753-1680920,1681574-1681918,1682002-1682171,
            1682272-1682422,1683296-1683365,1683456-1683640,
            1683999-1684092,1684195-1684313,1684658-1684717,
            1684844-1684930,1685631-1685717,1685905-1686013,
            1686105-1686183,1686350-1686437,1686611-1686675,
            1687570-1687722,1688514-1688620,1688702-1688784,
            1688926-1689016,1689095-1689231,1689612-1689701,
            1689795-1689962,1690366-1690560
          Length = 1809

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 10/35 (28%), Positives = 22/35 (62%)
 Frame = -3

Query: 348  LSRHPSVLIHLLFMISLNDDKSVNGFHGDLLWSEV 244
            LS + +V++ ++F    +DDK +   +G+ LW ++
Sbjct: 1404 LSGYNAVVLPVIFASRFDDDKDIGALYGE-LWEDI 1437


>11_01_0221 - 1720952-1721164,1721351-1721428,1721836-1721895,
            1721996-1722099,1722214-1722372,1722668-1722794,
            1723469-1723636,1723789-1723899,1723989-1724142,
            1724308-1724643,1724753-1724937,1725040-1725138,
            1725275-1725538,1725674-1725850,1726249-1726542,
            1726649-1726816,1727473-1727817,1727901-1728070,
            1728171-1728321,1729193-1729262,1729353-1729537,
            1729896-1729989,1730094-1730212,1730558-1730617,
            1730744-1730830,1732348-1732434,1732622-1732730,
            1732822-1732900,1733067-1733154,1733328-1733392,
            1734287-1734439,1735231-1735337,1735419-1735501,
            1735643-1735733,1735812-1735948,1736118-1736207,
            1736301-1736468,1736875-1737057
          Length = 1805

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 10/35 (28%), Positives = 22/35 (62%)
 Frame = -3

Query: 348  LSRHPSVLIHLLFMISLNDDKSVNGFHGDLLWSEV 244
            LS + +V++ ++F    +DDK +   +G+ LW ++
Sbjct: 1400 LSGYNAVVLPVIFASRFDDDKDIGALYGE-LWEDI 1433


>05_06_0037 + 25095452-25096049,25097093-25097280,25097926-25098429
          Length = 429

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
 Frame = +3

Query: 39  SPRDGTP*AP-KQQAIRPRSDARRSPK---SRQSATV*KVLWALETALEPPP 182
           SP   +P  P   +A +P + +RR  K   S  + T+ + LW + + L PPP
Sbjct: 35  SPEGSSPRDPDSDEAEQPDTPSRRGVKDDISELTETLTRRLWGVASFLAPPP 86


>02_02_0077 - 6586638-6587165
          Length = 175

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +1

Query: 346 KFSRRYQLPEGCDVDAVQS 402
           KF RR+ LPE  D+D V++
Sbjct: 117 KFMRRFPLPESADLDGVRA 135


>11_06_0346 -
           22549699-22549721,22549857-22549999,22550100-22552175,
           22552305-22552822
          Length = 919

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 272 KPLTDLSSLRLIMKRRWMSTDGCL 343
           KPL D  S +L+  + + S DGCL
Sbjct: 228 KPLNDSDSEKLLRTKAFSSMDGCL 251


>02_01_0200 + 1344755-1345115,1346229-1346366,1346505-1346752
          Length = 248

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 20/60 (33%), Positives = 26/60 (43%)
 Frame = +1

Query: 34  PYLLEMERPRLLNNKQFALALTPEEVLSLVSPQPSKKFYGPWKQLSNLLHDSGSTIKADK 213
           P LL +  PRL    + A A   E  +  V   PSK    P    SN     G+ +KA+K
Sbjct: 24  PDLLTLSSPRLRAGLRLARAAAGEAPVETVEAPPSKPEAEPSPAASN-----GAAVKAEK 78


>01_07_0096 -
           41059668-41059886,41059978-41060154,41060575-41060778,
           41060874-41061089,41061698-41061961,41062413-41062654,
           41062728-41062851,41062852-41062991,41063349-41063397,
           41063735-41063891,41063982-41064130,41064267-41064299,
           41064497-41064575,41064961-41065040,41065438-41065560
          Length = 751

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +1

Query: 232 LDVQHFAPEEISVKTVDGFIVIEANHEEKMD 324
           ++V+ F  +EI+    DGF+ I+ + EE+ D
Sbjct: 72  MEVESFENDEIAKILNDGFVSIKVDREERPD 102


>01_03_0151 -
           13229861-13230347,13230442-13230540,13230701-13230918,
           13231210-13231317,13231366-13231518,13232962-13233015,
           13233276-13233374,13234458-13234551,13234638-13234715,
           13237696-13237766,13238321-13238416,13238505-13238582,
           13238683-13238751,13238830-13238897,13239038-13239115,
           13239190-13239289,13240002-13240061,13240488-13240579,
           13241730-13241779,13241870-13241954,13242035-13242134,
           13242933-13243013,13244827-13244907
          Length = 832

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
 Frame = -3

Query: 288 KSVNGFHGDLLWSEVLHIKIDLKLALVG-FDGRARVVEEV---RELFPRPIELFR 136
           +SVNG   +L   E+ ++ + LK  L G    + RV E +   RE FP+ +++FR
Sbjct: 141 RSVNGELRELPPVELSNLPLILKTILEGGITDQMRVAELITQDREFFPKLLDIFR 195


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.315    0.132    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,537,447
Number of Sequences: 37544
Number of extensions: 223977
Number of successful extensions: 821
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 766563072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)

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