Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_M15
(513 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1788 + 29523216-29524867,29525048-29525075 31 0.54
05_07_0357 - 29533496-29533556,29533638-29533770,29533857-295339... 31 0.54
01_06_1311 - 36181961-36182519,36182547-36182605 31 0.54
03_05_1100 - 30404224-30405018,30405100-30405435 30 0.95
10_02_0137 - 5730778-5730873,5732137-5732334,5732413-5732625,573... 30 1.3
11_06_0710 - 26492093-26493460 29 1.7
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 29 2.9
11_03_0072 + 9605273-9606814,9616982-9617016,9617271-9617348,961... 28 5.1
08_02_0743 - 20647440-20647927,20647997-20648426,20650127-206505... 28 5.1
01_01_1188 - 9446764-9446943,9447030-9447232,9447307-9447438,944... 28 5.1
07_03_1643 + 28329090-28329125,28329260-28329335,28329413-28330305 27 6.7
05_04_0131 + 18290201-18290650,18291474-18291626,18291950-182920... 27 6.7
05_01_0318 - 2488529-2489196,2489773-2490372,2490620-2490773,249... 27 6.7
04_03_0540 + 16929782-16929834,16929937-16930032,16930111-169301... 27 6.7
10_08_0452 - 18038182-18038253,18038338-18038415,18038502-180385... 27 8.8
06_02_0086 - 11567390-11567634,11568316-11568341,11571082-115712... 27 8.8
05_01_0129 - 872127-872681,872762-873070,873180-873347 27 8.8
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 27 8.8
>07_03_1788 + 29523216-29524867,29525048-29525075
Length = 559
Score = 31.1 bits (67), Expect = 0.54
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +2
Query: 44 FEFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAA 175
F+ N +D + A K+GRGRP+ N PP+ A
Sbjct: 5 FDLNSAADPQTLAPPKRGRGRPRKNPPPPPPPATDPNPHPPSGA 48
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +2
Query: 65 DDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQA 220
DDG T+ + +GR + + +S K++K+ P A + K +D A
Sbjct: 430 DDGDTSSDYEGRKMKRLSQNRSFNKKMKQEVAPQDEASADSPAVKQADGPAA 481
>05_07_0357 -
29533496-29533556,29533638-29533770,29533857-29533953,
29534073-29534141,29534221-29534378,29534483-29534527,
29534598-29534625
Length = 196
Score = 31.1 bits (67), Expect = 0.54
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 86 EKKGRGRPKANG-TQSETKEVKKRGRPPAAAPKTKESAKSSDDE 214
E+K P+ANG + + E KK+G+ ++A K+K + DD+
Sbjct: 14 EEKIIPAPRANGKVEGKENEQKKQGKTDSSASKSKAAVNDDDDD 57
>01_06_1311 - 36181961-36182519,36182547-36182605
Length = 205
Score = 31.1 bits (67), Expect = 0.54
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +2
Query: 38 ALFEFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDD 211
A F DDG A + P+ +GT + E+++RG AAP+ + +S DD
Sbjct: 104 AAFSPTTSEDDGDGAGRLRPEW-PQDDGTSCDVAELRRRGDAEHAAPRRVATDRSCDD 160
>03_05_1100 - 30404224-30405018,30405100-30405435
Length = 376
Score = 30.3 bits (65), Expect = 0.95
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 119 GTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAP 223
G + K +K+R PP++ P + S+ SS +Q P
Sbjct: 132 GKKELLKTIKRRRPPPSSPPSSSSSSSSSQHQQQP 166
>10_02_0137 -
5730778-5730873,5732137-5732334,5732413-5732625,
5732748-5732870,5733726-5733841,5734530-5734897,
5735498-5735649,5736557-5736715,5737773-5737946
Length = 532
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Frame = +2
Query: 47 EFNKMSDDGSTAVEKKGRGRPKA----NGTQSETKEVKKRGRPPAAAPKTKESAKSSDDE 214
E + D+ S + K + +PK N T RG PPA+ K K + DD
Sbjct: 361 EDDDQEDESSPVLAPKQKDQPKDEPVDNSPAKPTPSGHARGTPPASKSKQKRKSGGGDDS 420
Query: 215 QA 220
+A
Sbjct: 421 KA 422
>11_06_0710 - 26492093-26493460
Length = 455
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +2
Query: 53 NKMSDDGSTAVEKKGRGRPK-ANGTQSETKEVKKRGRPP--AAAPKTKESAKSSDDE 214
+K SDD EKK + + K ++ + + K+ KK+ + P K K KSSD++
Sbjct: 146 SKSSDDDDDDAEKKSKKKSKNSDDDEDDKKKSKKKPKNPDDDEDDKKKSKKKSSDED 202
>02_02_0095 +
6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 28.7 bits (61), Expect = 2.9
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +2
Query: 50 FNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAP 223
F K+ D A + A + + KE KK P APK K + K ++E+AP
Sbjct: 769 FKKVMGDVKQADSVPQVQKKAAAPKEQKPKEAKKEA--PKEAPKPKAAEKPEEEEEAP 824
>11_03_0072 + 9605273-9606814,9616982-9617016,9617271-9617348,
9617427-9617501,9617583-9617657,9617731-9617977,
9618070-9618313,9618852-9619309,9619388-9619675,
9619751-9619788,9619882-9620452
Length = 1216
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 83 VEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQ 217
V K+ RGRPK N +S + + R + K+K + + E+
Sbjct: 1131 VRKRSRGRPKVNRYKSSGEAASMKRRKEVRSEKSKAANEGDSVEE 1175
>08_02_0743 -
20647440-20647927,20647997-20648426,20650127-20650570,
20650639-20650692
Length = 471
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +2
Query: 98 RGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAPV 226
RGRP + K RGRPP A ++ D APV
Sbjct: 115 RGRPPKSKDPISDAIPKSRGRPPKKAKTAPAPPPAAGDGSAPV 157
>01_01_1188 -
9446764-9446943,9447030-9447232,9447307-9447438,
9447570-9447657,9447723-9447950,9449542-9449763
Length = 350
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +2
Query: 74 STAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAP 223
S V K+ + K G + + KE++ RP K+ + K +E +P
Sbjct: 221 SPQVAKENQMASKPKGIKLKRKEIRGSARPIGGLEKSSQKRKKKKNEDSP 270
>07_03_1643 + 28329090-28329125,28329260-28329335,28329413-28330305
Length = 334
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 86 EKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDD 211
EKK + K GT+S K+ +K + A P ++AK +
Sbjct: 113 EKKAKEAAKEAGTESSEKKPEKEKKAEAKKPAKDDAAKKEGE 154
>05_04_0131 +
18290201-18290650,18291474-18291626,18291950-18292042,
18292285-18292313,18292702-18292795,18292941-18293153
Length = 343
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +2
Query: 74 STAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAP 223
ST V+ P+ ++S T+E K+ +P P T + +DE P
Sbjct: 85 STEVQPADDSEPEET-SRSTTEEKKEENKPDETPPSTVTEPEEDEDEYKP 133
>05_01_0318 -
2488529-2489196,2489773-2490372,2490620-2490773,
2490996-2491085,2491926-2492061,2492159-2492418,
2493448-2493846,2494482-2494661,2494728-2494922,
2496614-2496678,2497186-2497321,2497442-2497483,
2498351-2498689
Length = 1087
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 32 YFALFEFNKMSDDGSTAVEKKGRGRPKANGTQSE 133
Y +++F M DGST E++GR N SE
Sbjct: 741 YLQMYQFKYMRLDGSTKTEERGRLLADFNKKDSE 774
>04_03_0540 +
16929782-16929834,16929937-16930032,16930111-16930185,
16930819-16930893,16930987-16931209,16931303-16931546,
16932111-16932568,16932647-16932928,16933032-16933733
Length = 735
Score = 27.5 bits (58), Expect = 6.7
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +2
Query: 47 EFNKMSDDGSTAVEKKGRGRPKANGTQS--ETKEVKKRGRPPAAAPKTKESAKSSDDE 214
E ++ D ++KK RGRPK N +S E +K+R T +S ++E
Sbjct: 638 EGGNLTADILPPLKKKSRGRPKVNRYKSGGEVASLKRRKEVGIEKKNTTNECESVEEE 695
>10_08_0452 -
18038182-18038253,18038338-18038415,18038502-18038579,
18039112-18039168,18039276-18039349,18039424-18039495,
18039609-18039670,18039861-18039962,18040378-18040490,
18040809-18040940,18041156-18041243,18041617-18041711,
18041793-18042023,18042567-18042680,18042765-18042866,
18043091-18043207,18043301-18044146
Length = 810
Score = 27.1 bits (57), Expect = 8.8
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +2
Query: 80 AVEKKGRGRPKANGTQSETKE----VKKRGRPPAAAPKTKESAKSSDDEQAP 223
A EK +PK G +S+TK V+K R + K K A S D + P
Sbjct: 100 AKEKPSPKKPKTLGAKSDTKSSAEGVEKEKRRSPSPTKAKALASESQDIKKP 151
>06_02_0086 -
11567390-11567634,11568316-11568341,11571082-11571224,
11571569-11571682,11571855-11572888,11574723-11575047,
11576843-11577124
Length = 722
Score = 27.1 bits (57), Expect = 8.8
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 38 ALFEFNKMSDDGS-TAVEKKGRGRPKANGTQSETKEVKKRG 157
AL + S GS +A KGRG+P+ GT E + +RG
Sbjct: 425 ALESSKEQSQSGSASAAVDKGRGKPQGVGTM-ENNAISERG 464
>05_01_0129 - 872127-872681,872762-873070,873180-873347
Length = 343
Score = 27.1 bits (57), Expect = 8.8
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +2
Query: 32 YFALFEFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAA 172
Y+A + K D G+ AVE A + K V++RGRPP A
Sbjct: 126 YYAPKKKKKNHDAGAVAVEDDDD--ELATVAHDKIKHVRERGRPPLA 170
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 80 AVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDE 214
A++KK + ++ + + PA A K +ES++SSD E
Sbjct: 210 AIQKKTQESDSSDSDSDSESDEDVPTKAPAVAKKKEESSESSDSE 254
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,649,996
Number of Sequences: 37544
Number of extensions: 141163
Number of successful extensions: 834
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 832
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1106928780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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