Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_M15
(513 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75889-1|CAI10806.2| 1447|Homo sapiens androgen-induced prolifer... 32 1.0
AL138820-1|CAH73160.2| 1447|Homo sapiens androgen-induced prolif... 32 1.0
AL137201-1|CAB69911.1| 1447|Homo sapiens hypothetical protein pr... 32 1.0
AB023196-1|BAA76823.2| 1483|Homo sapiens KIAA0979 protein protein. 32 1.0
BC000588-1|AAH00588.1| 556|Homo sapiens HIRA interacting protei... 32 1.4
AJ223351-1|CAA11275.2| 556|Homo sapiens HIRA-interacting protei... 32 1.4
AJ223350-1|CAA11274.1| 512|Homo sapiens HIRIP3 protein. 32 1.4
BC033513-1|AAH33513.1| 265|Homo sapiens Unknown (protein for IM... 31 1.8
AK123158-1|BAC85544.1| 572|Homo sapiens protein ( Homo sapiens ... 31 1.8
M23618-1|AAA88076.1| 95|Homo sapiens high mobility group prote... 30 4.1
DQ128104-1|AAZ42188.1| 466|Homo sapiens unknown protein. 30 4.1
BC035744-1|AAH35744.1| 466|Homo sapiens CTDSPL2 protein protein. 30 4.1
AY364237-1|AAQ76796.1| 466|Homo sapiens hypothetical protein pr... 30 4.1
AK001385-1|BAA91664.1| 286|Homo sapiens protein ( Homo sapiens ... 30 4.1
U29175-1|AAB40977.1| 1647|Homo sapiens transcriptional activator... 30 5.5
D26156-1|BAA05143.1| 1647|Homo sapiens transcriptional activator... 30 5.5
BC150298-1|AAI50299.1| 1647|Homo sapiens SWI/SNF related, matrix... 30 5.5
AF254822-2|AAG24789.1| 1647|Homo sapiens SMARCA4 isoform 1 protein. 30 5.5
AF254822-1|AAG24790.1| 1679|Homo sapiens SMARCA4 isoform 2 protein. 30 5.5
AC006127-2|AAC97987.1| 661|Homo sapiens SN24_HUMAN protein. 30 5.5
AC006127-1|AAC97986.1| 628|Homo sapiens BRG-1-HUMAN [AA 812-14... 30 5.5
BC100806-1|AAI00807.1| 506|Homo sapiens chromodomain protein, Y... 29 7.2
BC100805-1|AAI00806.1| 506|Homo sapiens chromodomain protein, Y... 29 7.2
BC100804-1|AAI00805.1| 506|Homo sapiens chromodomain protein, Y... 29 7.2
BC100803-1|AAI00804.1| 506|Homo sapiens chromodomain protein, Y... 29 7.2
BC069440-1|AAH69440.1| 506|Homo sapiens chromodomain protein, Y... 29 7.2
BC040481-1|AAH40481.1| 873|Homo sapiens zinc fingers and homeob... 29 7.2
AY273798-1|AAP83842.1| 506|Homo sapiens chromodomain Y-like pro... 29 7.2
AK096185-1|BAC04720.1| 506|Homo sapiens protein ( Homo sapiens ... 29 7.2
AF195766-1|AAF35183.1| 873|Homo sapiens ZHX1 protein protein. 29 7.2
AF106862-1|AAD50624.1| 873|Homo sapiens zinc finger homeobox pr... 29 7.2
AC022517-1|AAF31271.1| 819|Homo sapiens KIAA0876 protein protein. 29 7.2
AB046852-1|BAB13458.1| 1457|Homo sapiens KIAA1632 protein protein. 29 7.2
AB020683-1|BAA74899.2| 1119|Homo sapiens KIAA0876 protein protein. 29 7.2
X14958-1|CAA33081.1| 96|Homo sapiens protein ( Human hmgI mRNA... 29 9.5
M23617-1|AAA88075.1| 96|Homo sapiens high mobility group prote... 29 9.5
M23616-1|AAA88074.1| 96|Homo sapiens HMGI protein. 29 9.5
M23615-1|AAA88073.1| 96|Homo sapiens high mobility group prote... 29 9.5
BT006774-1|AAP35420.1| 96|Homo sapiens high mobility group AT-... 29 9.5
BC015789-1|AAH15789.1| 96|Homo sapiens high mobility group AT-... 29 9.5
BC004924-1|AAH04924.1| 96|Homo sapiens high mobility group AT-... 29 9.5
AL354740-2|CAI14992.1| 96|Homo sapiens high mobility group AT-... 29 9.5
>Z75889-1|CAI10806.2| 1447|Homo sapiens androgen-induced proliferation
inhibitor protein.
Length = 1447
Score = 32.3 bits (70), Expect = 1.0
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +2
Query: 68 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSD 208
+ + + +KGRGRP + S+ K+ + GR AA K +S++ D
Sbjct: 1365 ESTQSTPQKGRGRPSKTPSPSQPKKNVRVGRSKQAATKENDSSEEVD 1411
>AL138820-1|CAH73160.2| 1447|Homo sapiens androgen-induced
proliferation inhibitor protein.
Length = 1447
Score = 32.3 bits (70), Expect = 1.0
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +2
Query: 68 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSD 208
+ + + +KGRGRP + S+ K+ + GR AA K +S++ D
Sbjct: 1365 ESTQSTPQKGRGRPSKTPSPSQPKKNVRVGRSKQAATKENDSSEEVD 1411
>AL137201-1|CAB69911.1| 1447|Homo sapiens hypothetical protein
protein.
Length = 1447
Score = 32.3 bits (70), Expect = 1.0
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +2
Query: 68 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSD 208
+ + + +KGRGRP + S+ K+ + GR AA K +S++ D
Sbjct: 1365 ESTQSTPQKGRGRPSKTPSPSQPKKNVRVGRSKQAATKENDSSEEVD 1411
>AB023196-1|BAA76823.2| 1483|Homo sapiens KIAA0979 protein protein.
Length = 1483
Score = 32.3 bits (70), Expect = 1.0
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +2
Query: 68 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSD 208
+ + + +KGRGRP + S+ K+ + GR AA K +S++ D
Sbjct: 1401 ESTQSTPQKGRGRPSKTPSPSQPKKNVRVGRSKQAATKENDSSEEVD 1447
>BC000588-1|AAH00588.1| 556|Homo sapiens HIRA interacting protein 3
protein.
Length = 556
Score = 31.9 bits (69), Expect = 1.4
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = +2
Query: 44 FEFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQ 217
F FN S+ GS A G P NG +E K+ P A K E +SSD+E+
Sbjct: 94 FRFNSESESGSEASSPDYFGPPAKNGVAAEVSPAKEEN--PRRASKAVE--ESSDEER 147
>AJ223351-1|CAA11275.2| 556|Homo sapiens HIRA-interacting protein 3
protein.
Length = 556
Score = 31.9 bits (69), Expect = 1.4
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = +2
Query: 44 FEFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQ 217
F FN S+ GS A G P NG +E K+ P A K E +SSD+E+
Sbjct: 94 FRFNSESESGSEASSPDYFGPPAKNGVAAEVSPAKEEN--PRRASKAVE--ESSDEER 147
>AJ223350-1|CAA11274.1| 512|Homo sapiens HIRIP3 protein.
Length = 512
Score = 31.9 bits (69), Expect = 1.4
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = +2
Query: 44 FEFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQ 217
F FN S+ GS A G P NG +E K+ P A K E +SSD+E+
Sbjct: 50 FRFNSESESGSEASSPDYFGPPAKNGVAAEVSPAKEEN--PRRASKAVE--ESSDEER 103
>BC033513-1|AAH33513.1| 265|Homo sapiens Unknown (protein for
IMAGE:5172161) protein.
Length = 265
Score = 31.5 bits (68), Expect = 1.8
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 62 SDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAP 178
+DD +T ++ P A G Q+ ++RG P AAAP
Sbjct: 141 ADDRTTVRRRREEPGPSAAGGQARASAARRRGGPTAAAP 179
>AK123158-1|BAC85544.1| 572|Homo sapiens protein ( Homo sapiens
cDNA FLJ41163 fis, clone BRACE2039734. ).
Length = 572
Score = 31.5 bits (68), Expect = 1.8
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = +2
Query: 47 EFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAK 199
E N+ S DGS EKK + R KA E KE K++ P PKT ++ K
Sbjct: 384 ELNRNSLDGSQE-EKKKKKRSKAKKDPKEPKEPKEKKEP--KEPKTPKAPK 431
>M23618-1|AAA88076.1| 95|Homo sapiens high mobility group protein
protein.
Length = 95
Score = 30.3 bits (65), Expect = 4.1
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 53 NKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAP 223
+K DG+ EK+GRGRP+ + KR R K K +AK+ P
Sbjct: 14 SKQEKDGT---EKRGRGRPRKQPPEPSEVPTPKRPRGRPKGSKNKGAAKTRKTTTTP 67
>DQ128104-1|AAZ42188.1| 466|Homo sapiens unknown protein.
Length = 466
Score = 30.3 bits (65), Expect = 4.1
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +2
Query: 62 SDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQA 220
S +G+ + + RP N E +E R PP AP T +S SS +A
Sbjct: 194 STNGAAYSNQAVQVRPSLNNGLEEAEETVNRDIPPLTAPVTPDSGYSSAHAEA 246
>BC035744-1|AAH35744.1| 466|Homo sapiens CTDSPL2 protein protein.
Length = 466
Score = 30.3 bits (65), Expect = 4.1
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +2
Query: 62 SDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQA 220
S +G+ + + RP N E +E R PP AP T +S SS +A
Sbjct: 194 STNGAAYSNQAVQVRPSLNNGLEEAEETVNRDIPPLTAPVTPDSGYSSAHAEA 246
>AY364237-1|AAQ76796.1| 466|Homo sapiens hypothetical protein
protein.
Length = 466
Score = 30.3 bits (65), Expect = 4.1
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +2
Query: 62 SDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQA 220
S +G+ + + RP N E +E R PP AP T +S SS +A
Sbjct: 194 STNGAAYSNQAVQVRPSLNNGLEEAEETVNRDIPPLTAPVTPDSGYSSAHAEA 246
>AK001385-1|BAA91664.1| 286|Homo sapiens protein ( Homo sapiens
cDNA FLJ10523 fis, clone NT2RP2000863. ).
Length = 286
Score = 30.3 bits (65), Expect = 4.1
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +2
Query: 62 SDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQA 220
S +G+ + + RP N E +E R PP AP T +S SS +A
Sbjct: 14 STNGAAYSNQAVQVRPSLNNGLEEAEETVNRDIPPLTAPVTPDSGYSSAHAEA 66
>U29175-1|AAB40977.1| 1647|Homo sapiens transcriptional activator
protein.
Length = 1647
Score = 29.9 bits (64), Expect = 5.5
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +2
Query: 62 SDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPA 169
SD GS+ R R K E+K+ KKRGRPPA
Sbjct: 1417 SDAGSSTPTTSTRSRDK----DDESKKQKKRGRPPA 1448
>D26156-1|BAA05143.1| 1647|Homo sapiens transcriptional activator
hSNF2b protein.
Length = 1647
Score = 29.9 bits (64), Expect = 5.5
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +2
Query: 62 SDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPA 169
SD GS+ R R K E+K+ KKRGRPPA
Sbjct: 1417 SDAGSSTPTTSTRSRDK----DDESKKQKKRGRPPA 1448
>BC150298-1|AAI50299.1| 1647|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1647
Score = 29.9 bits (64), Expect = 5.5
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +2
Query: 62 SDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPA 169
SD GS+ R R K E+K+ KKRGRPPA
Sbjct: 1417 SDAGSSTPTTSTRSRDK----DDESKKQKKRGRPPA 1448
>AF254822-2|AAG24789.1| 1647|Homo sapiens SMARCA4 isoform 1 protein.
Length = 1647
Score = 29.9 bits (64), Expect = 5.5
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +2
Query: 62 SDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPA 169
SD GS+ R R K E+K+ KKRGRPPA
Sbjct: 1417 SDAGSSTPTTSTRSRDK----DDESKKQKKRGRPPA 1448
>AF254822-1|AAG24790.1| 1679|Homo sapiens SMARCA4 isoform 2 protein.
Length = 1679
Score = 29.9 bits (64), Expect = 5.5
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +2
Query: 62 SDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPA 169
SD GS+ R R K E+K+ KKRGRPPA
Sbjct: 1449 SDAGSSTPTTSTRSRDK----DDESKKQKKRGRPPA 1480
>AC006127-2|AAC97987.1| 661|Homo sapiens SN24_HUMAN protein.
Length = 661
Score = 29.9 bits (64), Expect = 5.5
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +2
Query: 62 SDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPA 169
SD GS+ R R K E+K+ KKRGRPPA
Sbjct: 604 SDAGSSTPTTSTRSRDK----DDESKKQKKRGRPPA 635
>AC006127-1|AAC97986.1| 628|Homo sapiens BRG-1-HUMAN [AA 812-1440]
protein.
Length = 628
Score = 29.9 bits (64), Expect = 5.5
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +2
Query: 62 SDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPA 169
SD GS+ R R K E+K+ KKRGRPPA
Sbjct: 571 SDAGSSTPTTSTRSRDK----DDESKKQKKRGRPPA 602
>BC100806-1|AAI00807.1| 506|Homo sapiens chromodomain protein,
Y-like 2 protein.
Length = 506
Score = 29.5 bits (63), Expect = 7.2
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = +2
Query: 59 MSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSS 205
+ D +VEK RP G T +KR PP A PK S K S
Sbjct: 78 LRDSRGPSVEKLSH-RPSDPGKSKGTSHKRKRINPPLAKPKKGYSGKPS 125
>BC100805-1|AAI00806.1| 506|Homo sapiens chromodomain protein,
Y-like 2 protein.
Length = 506
Score = 29.5 bits (63), Expect = 7.2
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = +2
Query: 59 MSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSS 205
+ D +VEK RP G T +KR PP A PK S K S
Sbjct: 78 LRDSRGPSVEKLSH-RPSDPGKSKGTSHKRKRINPPLAKPKKGYSGKPS 125
>BC100804-1|AAI00805.1| 506|Homo sapiens chromodomain protein,
Y-like 2 protein.
Length = 506
Score = 29.5 bits (63), Expect = 7.2
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = +2
Query: 59 MSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSS 205
+ D +VEK RP G T +KR PP A PK S K S
Sbjct: 78 LRDSRGPSVEKLSH-RPSDPGKSKGTSHKRKRINPPLAKPKKGYSGKPS 125
>BC100803-1|AAI00804.1| 506|Homo sapiens chromodomain protein,
Y-like 2 protein.
Length = 506
Score = 29.5 bits (63), Expect = 7.2
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = +2
Query: 59 MSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSS 205
+ D +VEK RP G T +KR PP A PK S K S
Sbjct: 78 LRDSRGPSVEKLSH-RPSDPGKSKGTSHKRKRINPPLAKPKKGYSGKPS 125
>BC069440-1|AAH69440.1| 506|Homo sapiens chromodomain protein,
Y-like 2 protein.
Length = 506
Score = 29.5 bits (63), Expect = 7.2
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = +2
Query: 59 MSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSS 205
+ D +VEK RP G T +KR PP A PK S K S
Sbjct: 78 LRDSRGPSVEKLSH-RPSDPGKSKGTSHKRKRINPPLAKPKKGYSGKPS 125
>BC040481-1|AAH40481.1| 873|Homo sapiens zinc fingers and
homeoboxes 1 protein.
Length = 873
Score = 29.5 bits (63), Expect = 7.2
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 32 YFALFEFNKMSDDGSTAVEKKGRGRPKANG 121
Y+ N S +G +++ K+GRGRPK G
Sbjct: 723 YYYYQSANSSSMNGLSSLRKRGRGRPKGRG 752
>AY273798-1|AAP83842.1| 506|Homo sapiens chromodomain Y-like
protein 2 protein.
Length = 506
Score = 29.5 bits (63), Expect = 7.2
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = +2
Query: 59 MSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSS 205
+ D +VEK RP G T +KR PP A PK S K S
Sbjct: 78 LRDSRGPSVEKLSH-RPSDPGKSKGTSHKRKRINPPLAKPKKGYSGKPS 125
>AK096185-1|BAC04720.1| 506|Homo sapiens protein ( Homo sapiens
cDNA FLJ38866 fis, clone MESAN2013022, moderately
similar to Homo sapiens testis-specific chromodomain
Y-like protein (CDYL) mRNA. ).
Length = 506
Score = 29.5 bits (63), Expect = 7.2
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = +2
Query: 59 MSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSS 205
+ D +VEK RP G T +KR PP A PK S K S
Sbjct: 78 LRDSRGPSVEKLSH-RPSDPGKSKGTSHKRKRINPPLAKPKKGYSGKPS 125
>AF195766-1|AAF35183.1| 873|Homo sapiens ZHX1 protein protein.
Length = 873
Score = 29.5 bits (63), Expect = 7.2
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 32 YFALFEFNKMSDDGSTAVEKKGRGRPKANG 121
Y+ N S +G +++ K+GRGRPK G
Sbjct: 723 YYYYQSANSSSMNGLSSLRKRGRGRPKGRG 752
>AF106862-1|AAD50624.1| 873|Homo sapiens zinc finger homeobox
protein ZHX1 protein.
Length = 873
Score = 29.5 bits (63), Expect = 7.2
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 32 YFALFEFNKMSDDGSTAVEKKGRGRPKANG 121
Y+ N S +G +++ K+GRGRPK G
Sbjct: 723 YYYYQSANSSSMNGLSSLRKRGRGRPKGRG 752
>AC022517-1|AAF31271.1| 819|Homo sapiens KIAA0876 protein protein.
Length = 819
Score = 29.5 bits (63), Expect = 7.2
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Frame = +2
Query: 62 SDDGSTAVEKKGR-GRPKANGTQSETK-EVKKR-----GRPPAAAPKTKESAKSSDDEQA 220
+ G+ +E K R G +A T S+ K E+KK GRPP +P + ++S DE+A
Sbjct: 301 ASSGAGRMETKARAGEGQAPSTFSKLKMEIKKSRRHPLGRPPTRSPLSVVKQEASSDEEA 360
>AB046852-1|BAB13458.1| 1457|Homo sapiens KIAA1632 protein protein.
Length = 1457
Score = 29.5 bits (63), Expect = 7.2
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 68 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAP 223
+GS A K + R KA ++++TKE KK P K+S +++ P
Sbjct: 9 EGSMAEAVKPQRRAKAKASRTKTKEKKKYETPQREESSEVSLPKTSREQEIP 60
>AB020683-1|BAA74899.2| 1119|Homo sapiens KIAA0876 protein protein.
Length = 1119
Score = 29.5 bits (63), Expect = 7.2
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Frame = +2
Query: 62 SDDGSTAVEKKGR-GRPKANGTQSETK-EVKKR-----GRPPAAAPKTKESAKSSDDEQA 220
+ G+ +E K R G +A T S+ K E+KK GRPP +P + ++S DE+A
Sbjct: 601 ASSGAGRMETKARAGEGQAPSTFSKLKMEIKKSRRHPLGRPPTRSPLSVVKQEASSDEEA 660
>X14958-1|CAA33081.1| 96|Homo sapiens protein ( Human hmgI mRNA
for high mobility group protein Y. ).
Length = 96
Score = 29.1 bits (62), Expect = 9.5
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +2
Query: 53 NKMSDDGSTAVEKKGRGRPKANGTQ--SETKEVKK-RGRPPAAAPKTKESAKSSDDEQAP 223
+K DG+ EK+GRGRP+ + SE K+ RGRP + K K +AK+ P
Sbjct: 14 SKQEKDGT---EKRGRGRPRKQPPKEPSEVPTPKRPRGRPKGS--KNKGAAKTRKTTTTP 68
>M23617-1|AAA88075.1| 96|Homo sapiens high mobility group protein
protein.
Length = 96
Score = 29.1 bits (62), Expect = 9.5
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +2
Query: 53 NKMSDDGSTAVEKKGRGRPKANGTQ--SETKEVKK-RGRPPAAAPKTKESAKSSDDEQAP 223
+K DG+ EK+GRGRP+ + SE K+ RGRP + K K +AK+ P
Sbjct: 14 SKQEKDGT---EKRGRGRPRKQPPKEPSEVPTPKRPRGRPKGS--KNKGAAKTRKTTTTP 68
>M23616-1|AAA88074.1| 96|Homo sapiens HMGI protein.
Length = 96
Score = 29.1 bits (62), Expect = 9.5
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +2
Query: 53 NKMSDDGSTAVEKKGRGRPKANGTQ--SETKEVKK-RGRPPAAAPKTKESAKSSDDEQAP 223
+K DG+ EK+GRGRP+ + SE K+ RGRP + K K +AK+ P
Sbjct: 14 SKQEKDGT---EKRGRGRPRKQPPKEPSEVPTPKRPRGRPKGS--KNKGAAKTRKTTTTP 68
>M23615-1|AAA88073.1| 96|Homo sapiens high mobility group protein
protein.
Length = 96
Score = 29.1 bits (62), Expect = 9.5
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +2
Query: 53 NKMSDDGSTAVEKKGRGRPKANGTQ--SETKEVKK-RGRPPAAAPKTKESAKSSDDEQAP 223
+K DG+ EK+GRGRP+ + SE K+ RGRP + K K +AK+ P
Sbjct: 14 SKQEKDGT---EKRGRGRPRKQPPKEPSEVPTPKRPRGRPKGS--KNKGAAKTRKTTTTP 68
>BT006774-1|AAP35420.1| 96|Homo sapiens high mobility group
AT-hook 1 protein.
Length = 96
Score = 29.1 bits (62), Expect = 9.5
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +2
Query: 53 NKMSDDGSTAVEKKGRGRPKANGTQ--SETKEVKK-RGRPPAAAPKTKESAKSSDDEQAP 223
+K DG+ EK+GRGRP+ + SE K+ RGRP + K K +AK+ P
Sbjct: 14 SKQEKDGT---EKRGRGRPRKQPPKEPSEVPTPKRPRGRPKGS--KNKGAAKTRKTTTTP 68
>BC015789-1|AAH15789.1| 96|Homo sapiens high mobility group
AT-hook 1 protein.
Length = 96
Score = 29.1 bits (62), Expect = 9.5
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +2
Query: 53 NKMSDDGSTAVEKKGRGRPKANGTQ--SETKEVKK-RGRPPAAAPKTKESAKSSDDEQAP 223
+K DG+ EK+GRGRP+ + SE K+ RGRP + K K +AK+ P
Sbjct: 14 SKQEKDGT---EKRGRGRPRKQPPKEPSEVPTPKRPRGRPKGS--KNKGAAKTRKTTTTP 68
>BC004924-1|AAH04924.1| 96|Homo sapiens high mobility group
AT-hook 1 protein.
Length = 96
Score = 29.1 bits (62), Expect = 9.5
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +2
Query: 53 NKMSDDGSTAVEKKGRGRPKANGTQ--SETKEVKK-RGRPPAAAPKTKESAKSSDDEQAP 223
+K DG+ EK+GRGRP+ + SE K+ RGRP + K K +AK+ P
Sbjct: 14 SKQEKDGT---EKRGRGRPRKQPPKEPSEVPTPKRPRGRPKGS--KNKGAAKTRKTTTTP 68
>AL354740-2|CAI14992.1| 96|Homo sapiens high mobility group
AT-hook 1 protein.
Length = 96
Score = 29.1 bits (62), Expect = 9.5
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +2
Query: 53 NKMSDDGSTAVEKKGRGRPKANGTQ--SETKEVKK-RGRPPAAAPKTKESAKSSDDEQAP 223
+K DG+ EK+GRGRP+ + SE K+ RGRP + K K +AK+ P
Sbjct: 14 SKQEKDGT---EKRGRGRPRKQPPKEPSEVPTPKRPRGRPKGS--KNKGAAKTRKTTTTP 68
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,431,325
Number of Sequences: 237096
Number of extensions: 753210
Number of successful extensions: 3019
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 2819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2979
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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