Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_M15
(513 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY122218-1|AAM52730.1| 175|Drosophila melanogaster LP10528p pro... 32 0.40
AE014296-2336|AAF49778.1| 161|Drosophila melanogaster CG9040-PA... 32 0.40
AY058728-1|AAL13957.1| 521|Drosophila melanogaster LD47509p pro... 32 0.52
AE013599-778|AAF58994.1| 521|Drosophila melanogaster CG12759-PA... 32 0.52
Z23266-1|CAA80804.1| 527|Drosophila melanogaster DEAD-box prote... 31 0.92
L13612-1|AAA16339.1| 527|Drosophila melanogaster DEAD-box prote... 31 0.92
AE014296-1148|AAN12081.1| 2465|Drosophila melanogaster CG32394-P... 31 1.2
BT015282-1|AAT94511.1| 1250|Drosophila melanogaster LD04601p pro... 30 1.6
AF255733-1|AAF71288.1| 1250|Drosophila melanogaster DNA topoisom... 30 1.6
AE014134-3114|AAF53813.2| 1250|Drosophila melanogaster CG10123-P... 30 1.6
Y14157-1|CAA74574.1| 2176|Drosophila melanogaster Toucan protein... 29 2.8
AE014134-553|AAF51145.2| 2162|Drosophila melanogaster CG9660-PA,... 29 2.8
U56393-1|AAB01211.1| 355|Drosophila melanogaster chromosomal pr... 29 3.7
J04725-1|AAA28440.1| 355|Drosophila melanogaster protein ( D.me... 29 3.7
BT001636-1|AAN71391.1| 355|Drosophila melanogaster RE39218p pro... 29 3.7
BT001362-1|AAN71117.1| 355|Drosophila melanogaster AT29882p pro... 29 3.7
AY094819-1|AAM11172.1| 179|Drosophila melanogaster LD34139p pro... 29 3.7
AY071154-1|AAL48776.1| 176|Drosophila melanogaster RE18415p pro... 29 3.7
AE014297-4235|AAF56793.2| 5106|Drosophila melanogaster CG1842-PA... 29 3.7
AE014297-2125|AAF55257.1| 176|Drosophila melanogaster CG5516-PA... 29 3.7
AE014297-885|AAN13412.1| 355|Drosophila melanogaster CG9745-PC,... 29 3.7
AE014297-884|AAN13411.1| 355|Drosophila melanogaster CG9745-PB,... 29 3.7
AE014297-883|AAF54341.1| 355|Drosophila melanogaster CG9745-PA,... 29 3.7
AY051673-1|AAK93097.1| 470|Drosophila melanogaster LD22579p pro... 29 4.9
AE014134-2638|AAF53484.1| 470|Drosophila melanogaster CG4148-PA... 29 4.9
AY069397-1|AAL39542.1| 669|Drosophila melanogaster LD10094p pro... 28 6.5
AJ459408-1|CAD30679.1| 612|Drosophila melanogaster DEK protein ... 28 6.5
AE013599-2360|AAM70892.1| 669|Drosophila melanogaster CG5935-PB... 28 6.5
AE013599-2359|AAS64830.2| 612|Drosophila melanogaster CG5935-PD... 28 6.5
AE013599-2358|AAF57943.2| 663|Drosophila melanogaster CG5935-PA... 28 6.5
AE013599-2357|AAM70891.1| 667|Drosophila melanogaster CG5935-PC... 28 6.5
AY119557-1|AAM50211.1| 330|Drosophila melanogaster GH28859p pro... 28 8.5
AY113517-1|AAM29522.1| 738|Drosophila melanogaster RE59932p pro... 28 8.5
AY058592-1|AAL13821.1| 1311|Drosophila melanogaster LD28477p pro... 28 8.5
AF217802-1|AAG40586.1| 1311|Drosophila melanogaster xnp/atr-x DN... 28 8.5
AE014298-1309|AAF46469.1| 738|Drosophila melanogaster CG12121-P... 28 8.5
AE014297-3805|AAN14055.1| 1311|Drosophila melanogaster CG4548-PB... 28 8.5
AE014297-3804|AAF56471.1| 1311|Drosophila melanogaster CG4548-PA... 28 8.5
AE014296-3054|AAF49233.1| 330|Drosophila melanogaster CG6877-PA... 28 8.5
>AY122218-1|AAM52730.1| 175|Drosophila melanogaster LP10528p
protein.
Length = 175
Score = 32.3 bits (70), Expect = 0.40
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 53 NKMSDDGSTAVEKKGRGRPKAN-GTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAPV 226
++ S DGS+A KA ++ + ++R R AAPK K +A +S +Q PV
Sbjct: 92 SETSGDGSSAETTSSSTPTKAEKAKKTAARRARRRRRTTTAAPKRKVAAAASAKKQTPV 150
>AE014296-2336|AAF49778.1| 161|Drosophila melanogaster CG9040-PA
protein.
Length = 161
Score = 32.3 bits (70), Expect = 0.40
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 53 NKMSDDGSTAVEKKGRGRPKAN-GTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAPV 226
++ S DGS+A KA ++ + ++R R AAPK K +A +S +Q PV
Sbjct: 78 SETSGDGSSAETTSSSTPTKAEKAKKTAARRARRRRRTTTAAPKRKVAAAASAKKQTPV 136
>AY058728-1|AAL13957.1| 521|Drosophila melanogaster LD47509p
protein.
Length = 521
Score = 31.9 bits (69), Expect = 0.52
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 38 ALFEFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAK 199
AL + + S EKKG+GR +A + TK +K+ + A K + K
Sbjct: 464 ALLQDERFKSVDSARFEKKGKGRSRATQEDTPTKPLKRLNKEKPVAQKGRADVK 517
>AE013599-778|AAF58994.1| 521|Drosophila melanogaster CG12759-PA
protein.
Length = 521
Score = 31.9 bits (69), Expect = 0.52
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 38 ALFEFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAK 199
AL + + S EKKG+GR +A + TK +K+ + A K + K
Sbjct: 464 ALLQDERFKSVDSARFEKKGKGRSRATQEDTPTKPLKRLNKEKPVAQKGRADVK 517
>Z23266-1|CAA80804.1| 527|Drosophila melanogaster DEAD-box protein
protein.
Length = 527
Score = 31.1 bits (67), Expect = 0.92
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +2
Query: 38 ALFEFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSS 205
AL + + S EKKG+GR +A + TK +K+ + A K + S
Sbjct: 464 ALLQDERFKSVDSARFEKKGKGRSRATQEYTPTKPLKRLNKEKPVAQKGRADVNKS 519
>L13612-1|AAA16339.1| 527|Drosophila melanogaster DEAD-box protein
protein.
Length = 527
Score = 31.1 bits (67), Expect = 0.92
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +2
Query: 38 ALFEFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSS 205
AL + + S EKKG+GR +A + TK +K+ + A K + S
Sbjct: 464 ALLQDERFKSVDSARFEKKGKGRSRATQEYTPTKPLKRLNKEKPVAQKGRADVNKS 519
>AE014296-1148|AAN12081.1| 2465|Drosophila melanogaster CG32394-PA
protein.
Length = 2465
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +2
Query: 62 SDDGSTAVEKKGRGRPKANGTQSETKEV--KKRGRPPAAAPKTKESAKSSDDEQA 220
S+D +A+ K R KA+ + ++ + KRGR ++KES K+ ++A
Sbjct: 707 SEDSKSAITKSNRENRKASAKREKSPDAVENKRGRKSKDQKRSKESDKAEKSDKA 761
>BT015282-1|AAT94511.1| 1250|Drosophila melanogaster LD04601p
protein.
Length = 1250
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 89 KKGRGRPKANGTQSETKEVK-KRGRPPAAAPKTKESAKSS 205
KK G K + T+ E K K+ + P AAP K S+KSS
Sbjct: 838 KKPGGESKKSATKKPPNEPKPKKTKEPKAAPNKKTSSKSS 877
>AF255733-1|AAF71288.1| 1250|Drosophila melanogaster DNA
topoisomerase III alpha protein.
Length = 1250
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 89 KKGRGRPKANGTQSETKEVK-KRGRPPAAAPKTKESAKSS 205
KK G K + T+ E K K+ + P AAP K S+KSS
Sbjct: 838 KKPGGESKKSATKKPPNEPKPKKTKEPKAAPNKKTSSKSS 877
>AE014134-3114|AAF53813.2| 1250|Drosophila melanogaster CG10123-PA
protein.
Length = 1250
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 89 KKGRGRPKANGTQSETKEVK-KRGRPPAAAPKTKESAKSS 205
KK G K + T+ E K K+ + P AAP K S+KSS
Sbjct: 838 KKPGGESKKSATKKPPNEPKPKKTKEPKAAPNKKTSSKSS 877
>Y14157-1|CAA74574.1| 2176|Drosophila melanogaster Toucan protein
protein.
Length = 2176
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +2
Query: 59 MSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESA 196
MS D S+ +KG+G+P + TQ + ++ + RPP++ + +A
Sbjct: 888 MSPDDSSQTMRKGQGQPIS--TQQQQNQLAPQQRPPSSCLSSSSAA 931
>AE014134-553|AAF51145.2| 2162|Drosophila melanogaster CG9660-PA,
isoform A protein.
Length = 2162
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +2
Query: 59 MSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESA 196
MS D S+ +KG+G+P + TQ + ++ + RPP++ + +A
Sbjct: 888 MSPDDSSQTMRKGQGQPIS--TQQQQNQLAPQQRPPSSCLSSSSAA 931
>U56393-1|AAB01211.1| 355|Drosophila melanogaster chromosomal
protein D1 protein.
Length = 355
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = +2
Query: 68 DGSTAVEKKGRGRPKAN--GTQSETKEV---KKRGRPPAAAPKTKESAKSSDDE 214
DG V KK RGRP N G+ T V + RGRP A A ++ + DD+
Sbjct: 189 DGEPQVPKK-RGRPPQNKSGSGGSTGYVPTGRPRGRPKANAAPVEKHEDNDDDQ 241
>J04725-1|AAA28440.1| 355|Drosophila melanogaster protein (
D.melanogaster chromosomalprotein D1 mRNA, complete cds.
).
Length = 355
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = +2
Query: 68 DGSTAVEKKGRGRPKAN--GTQSETKEV---KKRGRPPAAAPKTKESAKSSDDE 214
DG V KK RGRP N G+ T V + RGRP A A ++ + DD+
Sbjct: 189 DGEPQVPKK-RGRPPQNKSGSGGSTGYVPTGRPRGRPKANAAPVEKHEDNDDDQ 241
>BT001636-1|AAN71391.1| 355|Drosophila melanogaster RE39218p
protein.
Length = 355
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = +2
Query: 68 DGSTAVEKKGRGRPKAN--GTQSETKEV---KKRGRPPAAAPKTKESAKSSDDE 214
DG V KK RGRP N G+ T V + RGRP A A ++ + DD+
Sbjct: 189 DGEPQVPKK-RGRPPQNKSGSGGSTGYVPTGRPRGRPKANAAPVEKHEDNDDDQ 241
>BT001362-1|AAN71117.1| 355|Drosophila melanogaster AT29882p
protein.
Length = 355
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = +2
Query: 68 DGSTAVEKKGRGRPKAN--GTQSETKEV---KKRGRPPAAAPKTKESAKSSDDE 214
DG V KK RGRP N G+ T V + RGRP A A ++ + DD+
Sbjct: 189 DGEPQVPKK-RGRPPQNKSGSGGSTGYVPTGRPRGRPKANAAPVEKHEDNDDDQ 241
>AY094819-1|AAM11172.1| 179|Drosophila melanogaster LD34139p
protein.
Length = 179
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = +2
Query: 68 DGSTAVEKKGRGRPKAN--GTQSETKEV---KKRGRPPAAAPKTKESAKSSDDE 214
DG V KK RGRP N G+ T V + RGRP A A ++ + DD+
Sbjct: 13 DGEPQVPKK-RGRPPQNKSGSGGSTGYVPTGRPRGRPKANAAPVEKHEDNDDDQ 65
>AY071154-1|AAL48776.1| 176|Drosophila melanogaster RE18415p
protein.
Length = 176
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +2
Query: 47 EFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQ 217
E + S + E+ +G+ S++ E +K+G P + S +SSDD++
Sbjct: 120 ESDSSSSSSDSDDEEGSSSDSSGSGSDSDSSEDQKQGAPQKKKKRAGSSPESSDDQE 176
>AE014297-4235|AAF56793.2| 5106|Drosophila melanogaster CG1842-PA
protein.
Length = 5106
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 77 TAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAP 223
T +KKG+G+ K + + K K G AA K ++ K+ D AP
Sbjct: 103 TVPDKKGKGKKKGDARMAGGKSAGKAGASAGAAGKGRK--KAGQDAAAP 149
>AE014297-2125|AAF55257.1| 176|Drosophila melanogaster CG5516-PA
protein.
Length = 176
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +2
Query: 47 EFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQ 217
E + S + E+ +G+ S++ E +K+G P + S +SSDD++
Sbjct: 120 ESDSSSSSSDSDDEEGSSSDSSGSGSDSDSSEDQKQGAPQKKKKRAGSSPESSDDQE 176
>AE014297-885|AAN13412.1| 355|Drosophila melanogaster CG9745-PC,
isoform C protein.
Length = 355
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = +2
Query: 68 DGSTAVEKKGRGRPKAN--GTQSETKEV---KKRGRPPAAAPKTKESAKSSDDE 214
DG V KK RGRP N G+ T V + RGRP A A ++ + DD+
Sbjct: 189 DGEPQVPKK-RGRPPQNKSGSGGSTGYVPTGRPRGRPKANAAPVEKHEDNDDDQ 241
>AE014297-884|AAN13411.1| 355|Drosophila melanogaster CG9745-PB,
isoform B protein.
Length = 355
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = +2
Query: 68 DGSTAVEKKGRGRPKAN--GTQSETKEV---KKRGRPPAAAPKTKESAKSSDDE 214
DG V KK RGRP N G+ T V + RGRP A A ++ + DD+
Sbjct: 189 DGEPQVPKK-RGRPPQNKSGSGGSTGYVPTGRPRGRPKANAAPVEKHEDNDDDQ 241
>AE014297-883|AAF54341.1| 355|Drosophila melanogaster CG9745-PA,
isoform A protein.
Length = 355
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = +2
Query: 68 DGSTAVEKKGRGRPKAN--GTQSETKEV---KKRGRPPAAAPKTKESAKSSDDE 214
DG V KK RGRP N G+ T V + RGRP A A ++ + DD+
Sbjct: 189 DGEPQVPKK-RGRPPQNKSGSGGSTGYVPTGRPRGRPKANAAPVEKHEDNDDDQ 241
>AY051673-1|AAK93097.1| 470|Drosophila melanogaster LD22579p
protein.
Length = 470
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 89 KKGRGRPKANGTQSETKEVKK-RGRPPAAAPKTKESAKSSDDEQAP 223
K+ RGRPK +G Q + R P K+K+ K+S+ +P
Sbjct: 215 KRKRGRPKGSGKQKNVDDSDNVTSREPDDNAKSKQDDKTSELSMSP 260
>AE014134-2638|AAF53484.1| 470|Drosophila melanogaster CG4148-PA
protein.
Length = 470
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 89 KKGRGRPKANGTQSETKEVKK-RGRPPAAAPKTKESAKSSDDEQAP 223
K+ RGRPK +G Q + R P K+K+ K+S+ +P
Sbjct: 215 KRKRGRPKGSGKQKNVDDSDNVTSREPDDNAKSKQDDKTSELSMSP 260
>AY069397-1|AAL39542.1| 669|Drosophila melanogaster LD10094p
protein.
Length = 669
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +2
Query: 68 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDE 214
D + V K+ RG G + +RGR AA + ++ + S D+E
Sbjct: 478 DADSDVPKRKRGSVGKRGRPAAPASAGRRGRGRGAASRKRKDSDSEDEE 526
>AJ459408-1|CAD30679.1| 612|Drosophila melanogaster DEK protein
protein.
Length = 612
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +2
Query: 68 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDE 214
D + V K+ RG G + +RGR AA + ++ + S D+E
Sbjct: 472 DADSDVPKRKRGSVGKRGRPAAPASAGRRGRGRGAASRKRKDSDSEDEE 520
>AE013599-2360|AAM70892.1| 669|Drosophila melanogaster CG5935-PB,
isoform B protein.
Length = 669
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +2
Query: 68 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDE 214
D + V K+ RG G + +RGR AA + ++ + S D+E
Sbjct: 478 DADSDVPKRKRGSVGKRGRPAAPASAGRRGRGRGAASRKRKDSDSEDEE 526
>AE013599-2359|AAS64830.2| 612|Drosophila melanogaster CG5935-PD,
isoform D protein.
Length = 612
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +2
Query: 68 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDE 214
D + V K+ RG G + +RGR AA + ++ + S D+E
Sbjct: 472 DADSDVPKRKRGSVGKRGRPAAPASAGRRGRGRGAASRKRKDSDSEDEE 520
>AE013599-2358|AAF57943.2| 663|Drosophila melanogaster CG5935-PA,
isoform A protein.
Length = 663
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +2
Query: 68 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDE 214
D + V K+ RG G + +RGR AA + ++ + S D+E
Sbjct: 472 DADSDVPKRKRGSVGKRGRPAAPASAGRRGRGRGAASRKRKDSDSEDEE 520
>AE013599-2357|AAM70891.1| 667|Drosophila melanogaster CG5935-PC,
isoform C protein.
Length = 667
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +2
Query: 68 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDE 214
D + V K+ RG G + +RGR AA + ++ + S D+E
Sbjct: 476 DADSDVPKRKRGSVGKRGRPAAPASAGRRGRGRGAASRKRKDSDSEDEE 524
>AY119557-1|AAM50211.1| 330|Drosophila melanogaster GH28859p
protein.
Length = 330
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +2
Query: 47 EFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQA 220
E ++++DDG+T +E K T ETKE +AP A+ DD++A
Sbjct: 108 ETHQLNDDGTTQLEDK-----ICELTMEETKEEMHTPDSDKSAPGAGGQAEDEDDDEA 160
>AY113517-1|AAM29522.1| 738|Drosophila melanogaster RE59932p
protein.
Length = 738
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +2
Query: 80 AVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSD-DEQAP 223
AV+++ +P+ Q+ + ++ PP AAPK +E+ KS E+AP
Sbjct: 221 AVKEESVPKPEVAANQN-ISDKQELPPPPNAAPKVEEAVKSEQKQEEAP 268
>AY058592-1|AAL13821.1| 1311|Drosophila melanogaster LD28477p
protein.
Length = 1311
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 56 KMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQ 217
KMS D A + R + + ++SE + PAA + +E KSS DE+
Sbjct: 265 KMSSDSEEAATTSKKSRQRRSKSESEADSDYEA---PAAEEEEEEERKSSGDEE 315
>AF217802-1|AAG40586.1| 1311|Drosophila melanogaster xnp/atr-x DNA
helicase protein.
Length = 1311
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 56 KMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQ 217
KMS D A + R + + ++SE + PAA + +E KSS DE+
Sbjct: 265 KMSSDSEEAATTSKKSRQRRSKSESEADSDYEA---PAAEEEEEEERKSSGDEE 315
>AE014298-1309|AAF46469.1| 738|Drosophila melanogaster CG12121-PA
protein.
Length = 738
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +2
Query: 80 AVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSD-DEQAP 223
AV+++ +P+ Q+ + ++ PP AAPK +E+ KS E+AP
Sbjct: 221 AVKEESVPKPEVAANQN-ISDKQELPPPPNAAPKVEEAVKSEQKQEEAP 268
>AE014297-3805|AAN14055.1| 1311|Drosophila melanogaster CG4548-PB,
isoform B protein.
Length = 1311
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 56 KMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQ 217
KMS D A + R + + ++SE + PAA + +E KSS DE+
Sbjct: 265 KMSSDSEEAATTSKKSRQRRSKSESEADSDYEA---PAAEEEEEEERKSSGDEE 315
>AE014297-3804|AAF56471.1| 1311|Drosophila melanogaster CG4548-PA,
isoform A protein.
Length = 1311
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 56 KMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQ 217
KMS D A + R + + ++SE + PAA + +E KSS DE+
Sbjct: 265 KMSSDSEEAATTSKKSRQRRSKSESEADSDYEA---PAAEEEEEEERKSSGDEE 315
>AE014296-3054|AAF49233.1| 330|Drosophila melanogaster CG6877-PA
protein.
Length = 330
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +2
Query: 47 EFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQA 220
E ++++DDG+T +E K T ETKE +AP A+ DD++A
Sbjct: 108 ETHQLNDDGTTQLEDK-----ICELTMEETKEEMHTPDSDKSAPGAGGQAEDEDDDEA 160
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,004,769
Number of Sequences: 53049
Number of extensions: 223886
Number of successful extensions: 1197
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1188
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1867000320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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