Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_M12
         (615 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL834139-1|CAD38854.1| 1340|Homo sapiens hypothetical protein pr...    30   5.6  
AL121906-5|CAI22127.1|  396|Homo sapiens amyloid beta (A4) precu...    29   9.9  
AB039947-1|BAB16413.1|  273|Homo sapiens X11L-binding protein 51...    29   9.9  

>AL834139-1|CAD38854.1| 1340|Homo sapiens hypothetical protein
           protein.
          Length = 1340

 Score = 30.3 bits (65), Expect = 5.6
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +3

Query: 3   RGFTQVKPVSDSKWTYHLSSWYCV*VCWRPPPHWILKALPRSQPLINCTMM 155
           R FT   P+S S+W+  ++ W      W   P W  +A P + P ++C  M
Sbjct: 308 RNFTLQCPLSWSRWSSRMTWW------WFVAPWWNSRARPGAFPCLSCRGM 352


>AL121906-5|CAI22127.1|  396|Homo sapiens amyloid beta (A4)
           precursor protein-binding, family A, member 2 binding
           protein protein.
          Length = 396

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 81  CWRPPPHWILKALPRSQPL 137
           CWRP PH +    PR +PL
Sbjct: 264 CWRPGPHSVPSQAPRLEPL 282


>AB039947-1|BAB16413.1|  273|Homo sapiens X11L-binding protein 51
           protein.
          Length = 273

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 81  CWRPPPHWILKALPRSQPL 137
           CWRP PH +    PR +PL
Sbjct: 141 CWRPGPHSVPSQAPRLEPL 159


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,152,010
Number of Sequences: 237096
Number of extensions: 1562555
Number of successful extensions: 5113
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5112
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)