Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_M07
         (636 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              22   4.3  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    22   4.3  
AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          21   7.6  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   7.6  

>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 536 LKRNFLMQLTKRIIKLL*LFIFSNRS 613
           +K NF +     I  +L +FI+SN +
Sbjct: 1   MKENFSIMFIHSIFLILIIFIYSNET 26


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 536 LKRNFLMQLTKRIIKLL*LFIFSNRS 613
           +K NF +     I  +L +FI+SN +
Sbjct: 1   MKENFSIMFIHSIFLILIIFIYSNET 26


>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
 Frame = +2

Query: 80  LWMISFWVRKFTTI----AVVVTMKDLKMRAKVAMRRQ 181
           L+++   V  FT +    A+V+T+K ++ RA  + RR+
Sbjct: 69  LFVLGLIVPVFTIVSSYAAIVLTLKKVRKRAGASGRRE 106


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -2

Query: 275 SSKTPLGPVLLADPVQLLTCGSSLGIST 192
           S K  +  V   DPV+ L C   L + T
Sbjct: 17  SVKNEISTVEPVDPVKSLVCSPDLSVFT 44


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,383
Number of Sequences: 438
Number of extensions: 2771
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)