Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_M05
         (433 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    27   0.12 
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              23   1.5  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    23   1.5  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              21   4.5  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 26.6 bits (56), Expect = 0.12
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +1

Query: 232 GKDKEEP*ECKVQGPLLSVPVH-PRHHGQGEGRET-ETEFTSRS 357
           GK+ E+P  C + G   +VP    RH+    G +  + E+ S+S
Sbjct: 85  GKEGEDPYRCNICGKTFAVPARLTRHYRTHTGEKPYQCEYCSKS 128


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = +1

Query: 145 ERHYTLHHAA*NQGYQRFFVESA*ERCQIGKDKEEP*ECK 264
           ERH TLHH     G +    E+     +I     EP ECK
Sbjct: 101 ERHITLHHCYDADGIKLMNEENGVMEIKI----REPVECK 136


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = +1

Query: 145 ERHYTLHHAA*NQGYQRFFVESA*ERCQIGKDKEEP*ECK 264
           ERH TLHH     G +    E+     +I     EP ECK
Sbjct: 101 ERHITLHHCYDADGIKLMNEENGVMEIKI----REPVECK 136


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
 Frame = +2

Query: 140 SVSDITHFI-MPREIKDIKDFLLKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDK 316
           S+ D  + I M + I   K  + K    D    KI    ENV+  + C+   ++ V  D 
Sbjct: 18  SIKDFQNAIRMGQSICMAKTGINKQIINDVNDGKINIEDENVQLYIECAMKKFSFVDKDG 77

Query: 317 EKAEKLKQSL 346
              E + + +
Sbjct: 78  NFNEHVSREI 87


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,620
Number of Sequences: 438
Number of extensions: 1851
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11244597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)