SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_M04
         (302 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M17885-1|AAA36470.1|  317|Homo sapiens protein ( Human acidic ri...    88   4e-18
BC107717-1|AAI07718.1|  255|Homo sapiens RPLP0 protein protein.        88   4e-18
BC070194-1|AAH70194.1|  254|Homo sapiens RPLP0 protein protein.        88   4e-18
BC015690-1|AAH15690.1|  317|Homo sapiens ribosomal protein, larg...    88   4e-18
BC015173-1|AAH15173.1|  317|Homo sapiens ribosomal protein, larg...    88   4e-18
BC009867-1|AAH09867.1|  317|Homo sapiens ribosomal protein, larg...    88   4e-18
BC008594-1|AAH08594.1|  317|Homo sapiens ribosomal protein, larg...    88   4e-18
BC008092-1|AAH08092.1|  317|Homo sapiens ribosomal protein, larg...    88   4e-18
BC005863-1|AAH05863.1|  317|Homo sapiens ribosomal protein, larg...    88   4e-18
BC003655-1|AAH03655.1|  317|Homo sapiens ribosomal protein, larg...    88   4e-18
BC001834-1|AAH01834.1|  317|Homo sapiens ribosomal protein, larg...    88   4e-18
BC001127-1|AAH01127.1|  317|Homo sapiens ribosomal protein, larg...    88   4e-18
BC000752-1|AAH00752.1|  317|Homo sapiens ribosomal protein, larg...    88   4e-18
BC000345-1|AAH00345.1|  317|Homo sapiens ribosomal protein, larg...    88   4e-18
BC000087-1|AAH00087.1|  317|Homo sapiens ribosomal protein, larg...    88   4e-18
AK222571-1|BAD96291.1|  317|Homo sapiens ribosomal protein P0 va...    88   4e-18
AK222468-1|BAD96188.1|  317|Homo sapiens ribosomal protein P0 va...    88   4e-18
AC004263-1|AAC05176.1|  317|Homo sapiens WUGSC:H_278C19.2 protein.     88   4e-18
AY064377-1|AAL62450.1|  317|Homo sapiens BLOCK 23 protein.             87   1e-17
AL139287-14|CAI23184.1|  852|Homo sapiens taste receptor, type 1...    33   0.22 
AB065647-1|BAC05873.1|  936|Homo sapiens seven transmembrane hel...    33   0.22 
BC132936-1|AAI32937.1|  189|Homo sapiens FLJ46836 protein protein.     28   4.7  
AL589653-1|CAI40809.1| 1560|Homo sapiens proprotein convertase s...    28   4.7  
AL391868-1|CAI40675.1| 1560|Homo sapiens proprotein convertase s...    28   4.7  
AL353607-3|CAI41234.1| 1560|Homo sapiens proprotein convertase s...    28   4.7  
AK128673-1|BAC87564.1|  189|Homo sapiens protein ( Homo sapiens ...    28   4.7  
BC034988-1|AAH34988.1| 1036|Homo sapiens ULK2 protein protein.         27   8.1  
AB014523-1|BAA31598.2| 1100|Homo sapiens KIAA0623 protein protein.     27   8.1  

>M17885-1|AAA36470.1|  317|Homo sapiens protein ( Human acidic
           ribosomal phosphoprotein P0 mRNA, complete cds. ).
          Length = 317

 Score = 88.2 bits (209), Expect = 4e-18
 Identities = 45/72 (62%), Positives = 54/72 (75%)
 Frame = +3

Query: 75  MGREDKATWKSNYFVKNHPTVGRIPQMVS*WGADNVGSQQMPQIRISLRGHSIVLMGQNT 254
           M RED+ATWKSNYF+K    +   P+     GADNVGS+QM QIR+SLRG ++VLMG+NT
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFI-VGADNVGSKQMQQIRMSLRGKAVVLMGKNT 59

Query: 255 MMRKAINDHL*N 290
           MMRKAI  HL N
Sbjct: 60  MMRKAIRGHLEN 71


>BC107717-1|AAI07718.1|  255|Homo sapiens RPLP0 protein protein.
          Length = 255

 Score = 88.2 bits (209), Expect = 4e-18
 Identities = 45/72 (62%), Positives = 54/72 (75%)
 Frame = +3

Query: 75  MGREDKATWKSNYFVKNHPTVGRIPQMVS*WGADNVGSQQMPQIRISLRGHSIVLMGQNT 254
           M RED+ATWKSNYF+K    +   P+     GADNVGS+QM QIR+SLRG ++VLMG+NT
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFI-VGADNVGSKQMQQIRMSLRGKAVVLMGKNT 59

Query: 255 MMRKAINDHL*N 290
           MMRKAI  HL N
Sbjct: 60  MMRKAIRGHLEN 71


>BC070194-1|AAH70194.1|  254|Homo sapiens RPLP0 protein protein.
          Length = 254

 Score = 88.2 bits (209), Expect = 4e-18
 Identities = 45/72 (62%), Positives = 54/72 (75%)
 Frame = +3

Query: 75  MGREDKATWKSNYFVKNHPTVGRIPQMVS*WGADNVGSQQMPQIRISLRGHSIVLMGQNT 254
           M RED+ATWKSNYF+K    +   P+     GADNVGS+QM QIR+SLRG ++VLMG+NT
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFI-VGADNVGSKQMQQIRMSLRGKAVVLMGKNT 59

Query: 255 MMRKAINDHL*N 290
           MMRKAI  HL N
Sbjct: 60  MMRKAIRGHLEN 71


>BC015690-1|AAH15690.1|  317|Homo sapiens ribosomal protein, large,
           P0 protein.
          Length = 317

 Score = 88.2 bits (209), Expect = 4e-18
 Identities = 45/72 (62%), Positives = 54/72 (75%)
 Frame = +3

Query: 75  MGREDKATWKSNYFVKNHPTVGRIPQMVS*WGADNVGSQQMPQIRISLRGHSIVLMGQNT 254
           M RED+ATWKSNYF+K    +   P+     GADNVGS+QM QIR+SLRG ++VLMG+NT
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFI-VGADNVGSKQMQQIRMSLRGKAVVLMGKNT 59

Query: 255 MMRKAINDHL*N 290
           MMRKAI  HL N
Sbjct: 60  MMRKAIRGHLEN 71


>BC015173-1|AAH15173.1|  317|Homo sapiens ribosomal protein, large,
           P0 protein.
          Length = 317

 Score = 88.2 bits (209), Expect = 4e-18
 Identities = 45/72 (62%), Positives = 54/72 (75%)
 Frame = +3

Query: 75  MGREDKATWKSNYFVKNHPTVGRIPQMVS*WGADNVGSQQMPQIRISLRGHSIVLMGQNT 254
           M RED+ATWKSNYF+K    +   P+     GADNVGS+QM QIR+SLRG ++VLMG+NT
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFI-VGADNVGSKQMQQIRMSLRGKAVVLMGKNT 59

Query: 255 MMRKAINDHL*N 290
           MMRKAI  HL N
Sbjct: 60  MMRKAIRGHLEN 71


>BC009867-1|AAH09867.1|  317|Homo sapiens ribosomal protein, large,
           P0 protein.
          Length = 317

 Score = 88.2 bits (209), Expect = 4e-18
 Identities = 45/72 (62%), Positives = 54/72 (75%)
 Frame = +3

Query: 75  MGREDKATWKSNYFVKNHPTVGRIPQMVS*WGADNVGSQQMPQIRISLRGHSIVLMGQNT 254
           M RED+ATWKSNYF+K    +   P+     GADNVGS+QM QIR+SLRG ++VLMG+NT
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFI-VGADNVGSKQMQQIRMSLRGKAVVLMGKNT 59

Query: 255 MMRKAINDHL*N 290
           MMRKAI  HL N
Sbjct: 60  MMRKAIRGHLEN 71


>BC008594-1|AAH08594.1|  317|Homo sapiens ribosomal protein, large,
           P0 protein.
          Length = 317

 Score = 88.2 bits (209), Expect = 4e-18
 Identities = 45/72 (62%), Positives = 54/72 (75%)
 Frame = +3

Query: 75  MGREDKATWKSNYFVKNHPTVGRIPQMVS*WGADNVGSQQMPQIRISLRGHSIVLMGQNT 254
           M RED+ATWKSNYF+K    +   P+     GADNVGS+QM QIR+SLRG ++VLMG+NT
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFI-VGADNVGSKQMQQIRMSLRGKAVVLMGKNT 59

Query: 255 MMRKAINDHL*N 290
           MMRKAI  HL N
Sbjct: 60  MMRKAIRGHLEN 71


>BC008092-1|AAH08092.1|  317|Homo sapiens ribosomal protein, large,
           P0 protein.
          Length = 317

 Score = 88.2 bits (209), Expect = 4e-18
 Identities = 45/72 (62%), Positives = 54/72 (75%)
 Frame = +3

Query: 75  MGREDKATWKSNYFVKNHPTVGRIPQMVS*WGADNVGSQQMPQIRISLRGHSIVLMGQNT 254
           M RED+ATWKSNYF+K    +   P+     GADNVGS+QM QIR+SLRG ++VLMG+NT
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFI-VGADNVGSKQMQQIRMSLRGKAVVLMGKNT 59

Query: 255 MMRKAINDHL*N 290
           MMRKAI  HL N
Sbjct: 60  MMRKAIRGHLEN 71


>BC005863-1|AAH05863.1|  317|Homo sapiens ribosomal protein, large,
           P0 protein.
          Length = 317

 Score = 88.2 bits (209), Expect = 4e-18
 Identities = 45/72 (62%), Positives = 54/72 (75%)
 Frame = +3

Query: 75  MGREDKATWKSNYFVKNHPTVGRIPQMVS*WGADNVGSQQMPQIRISLRGHSIVLMGQNT 254
           M RED+ATWKSNYF+K    +   P+     GADNVGS+QM QIR+SLRG ++VLMG+NT
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFI-VGADNVGSKQMQQIRMSLRGKAVVLMGKNT 59

Query: 255 MMRKAINDHL*N 290
           MMRKAI  HL N
Sbjct: 60  MMRKAIRGHLEN 71


>BC003655-1|AAH03655.1|  317|Homo sapiens ribosomal protein, large,
           P0 protein.
          Length = 317

 Score = 88.2 bits (209), Expect = 4e-18
 Identities = 45/72 (62%), Positives = 54/72 (75%)
 Frame = +3

Query: 75  MGREDKATWKSNYFVKNHPTVGRIPQMVS*WGADNVGSQQMPQIRISLRGHSIVLMGQNT 254
           M RED+ATWKSNYF+K    +   P+     GADNVGS+QM QIR+SLRG ++VLMG+NT
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFI-VGADNVGSKQMQQIRMSLRGKAVVLMGKNT 59

Query: 255 MMRKAINDHL*N 290
           MMRKAI  HL N
Sbjct: 60  MMRKAIRGHLEN 71


>BC001834-1|AAH01834.1|  317|Homo sapiens ribosomal protein, large,
           P0 protein.
          Length = 317

 Score = 88.2 bits (209), Expect = 4e-18
 Identities = 45/72 (62%), Positives = 54/72 (75%)
 Frame = +3

Query: 75  MGREDKATWKSNYFVKNHPTVGRIPQMVS*WGADNVGSQQMPQIRISLRGHSIVLMGQNT 254
           M RED+ATWKSNYF+K    +   P+     GADNVGS+QM QIR+SLRG ++VLMG+NT
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFI-VGADNVGSKQMQQIRMSLRGKAVVLMGKNT 59

Query: 255 MMRKAINDHL*N 290
           MMRKAI  HL N
Sbjct: 60  MMRKAIRGHLEN 71


>BC001127-1|AAH01127.1|  317|Homo sapiens ribosomal protein, large,
           P0 protein.
          Length = 317

 Score = 88.2 bits (209), Expect = 4e-18
 Identities = 45/72 (62%), Positives = 54/72 (75%)
 Frame = +3

Query: 75  MGREDKATWKSNYFVKNHPTVGRIPQMVS*WGADNVGSQQMPQIRISLRGHSIVLMGQNT 254
           M RED+ATWKSNYF+K    +   P+     GADNVGS+QM QIR+SLRG ++VLMG+NT
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFI-VGADNVGSKQMQQIRMSLRGKAVVLMGKNT 59

Query: 255 MMRKAINDHL*N 290
           MMRKAI  HL N
Sbjct: 60  MMRKAIRGHLEN 71


>BC000752-1|AAH00752.1|  317|Homo sapiens ribosomal protein, large,
           P0 protein.
          Length = 317

 Score = 88.2 bits (209), Expect = 4e-18
 Identities = 45/72 (62%), Positives = 54/72 (75%)
 Frame = +3

Query: 75  MGREDKATWKSNYFVKNHPTVGRIPQMVS*WGADNVGSQQMPQIRISLRGHSIVLMGQNT 254
           M RED+ATWKSNYF+K    +   P+     GADNVGS+QM QIR+SLRG ++VLMG+NT
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFI-VGADNVGSKQMQQIRMSLRGKAVVLMGKNT 59

Query: 255 MMRKAINDHL*N 290
           MMRKAI  HL N
Sbjct: 60  MMRKAIRGHLEN 71


>BC000345-1|AAH00345.1|  317|Homo sapiens ribosomal protein, large,
           P0 protein.
          Length = 317

 Score = 88.2 bits (209), Expect = 4e-18
 Identities = 45/72 (62%), Positives = 54/72 (75%)
 Frame = +3

Query: 75  MGREDKATWKSNYFVKNHPTVGRIPQMVS*WGADNVGSQQMPQIRISLRGHSIVLMGQNT 254
           M RED+ATWKSNYF+K    +   P+     GADNVGS+QM QIR+SLRG ++VLMG+NT
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFI-VGADNVGSKQMQQIRMSLRGKAVVLMGKNT 59

Query: 255 MMRKAINDHL*N 290
           MMRKAI  HL N
Sbjct: 60  MMRKAIRGHLEN 71


>BC000087-1|AAH00087.1|  317|Homo sapiens ribosomal protein, large,
           P0 protein.
          Length = 317

 Score = 88.2 bits (209), Expect = 4e-18
 Identities = 45/72 (62%), Positives = 54/72 (75%)
 Frame = +3

Query: 75  MGREDKATWKSNYFVKNHPTVGRIPQMVS*WGADNVGSQQMPQIRISLRGHSIVLMGQNT 254
           M RED+ATWKSNYF+K    +   P+     GADNVGS+QM QIR+SLRG ++VLMG+NT
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFI-VGADNVGSKQMQQIRMSLRGKAVVLMGKNT 59

Query: 255 MMRKAINDHL*N 290
           MMRKAI  HL N
Sbjct: 60  MMRKAIRGHLEN 71


>AK222571-1|BAD96291.1|  317|Homo sapiens ribosomal protein P0
           variant protein.
          Length = 317

 Score = 88.2 bits (209), Expect = 4e-18
 Identities = 45/72 (62%), Positives = 54/72 (75%)
 Frame = +3

Query: 75  MGREDKATWKSNYFVKNHPTVGRIPQMVS*WGADNVGSQQMPQIRISLRGHSIVLMGQNT 254
           M RED+ATWKSNYF+K    +   P+     GADNVGS+QM QIR+SLRG ++VLMG+NT
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFI-VGADNVGSKQMQQIRMSLRGKAVVLMGKNT 59

Query: 255 MMRKAINDHL*N 290
           MMRKAI  HL N
Sbjct: 60  MMRKAIRGHLEN 71


>AK222468-1|BAD96188.1|  317|Homo sapiens ribosomal protein P0
           variant protein.
          Length = 317

 Score = 88.2 bits (209), Expect = 4e-18
 Identities = 45/72 (62%), Positives = 54/72 (75%)
 Frame = +3

Query: 75  MGREDKATWKSNYFVKNHPTVGRIPQMVS*WGADNVGSQQMPQIRISLRGHSIVLMGQNT 254
           M RED+ATWKSNYF+K    +   P+     GADNVGS+QM QIR+SLRG ++VLMG+NT
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFI-VGADNVGSKQMQQIRMSLRGKAVVLMGRNT 59

Query: 255 MMRKAINDHL*N 290
           MMRKAI  HL N
Sbjct: 60  MMRKAIRGHLEN 71


>AC004263-1|AAC05176.1|  317|Homo sapiens WUGSC:H_278C19.2 protein.
          Length = 317

 Score = 88.2 bits (209), Expect = 4e-18
 Identities = 45/72 (62%), Positives = 54/72 (75%)
 Frame = +3

Query: 75  MGREDKATWKSNYFVKNHPTVGRIPQMVS*WGADNVGSQQMPQIRISLRGHSIVLMGQNT 254
           M RED+ATWKSNYF+K    +   P+     GADNVGS+QM QIR+SLRG ++VLMG+NT
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFI-VGADNVGSKQMQQIRMSLRGKAVVLMGKNT 59

Query: 255 MMRKAINDHL*N 290
           MMRKAI  HL N
Sbjct: 60  MMRKAIRGHLEN 71


>AY064377-1|AAL62450.1|  317|Homo sapiens BLOCK 23 protein.
          Length = 317

 Score = 87.0 bits (206), Expect = 1e-17
 Identities = 45/72 (62%), Positives = 53/72 (73%)
 Frame = +3

Query: 75  MGREDKATWKSNYFVKNHPTVGRIPQMVS*WGADNVGSQQMPQIRISLRGHSIVLMGQNT 254
           M RED+ATWKSNYF+K    +   P+     GADNVGS+QM QIR+SLRG  +VLMG+NT
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFI-VGADNVGSKQMQQIRMSLRGKVVVLMGKNT 59

Query: 255 MMRKAINDHL*N 290
           MMRKAI  HL N
Sbjct: 60  MMRKAIRGHLEN 71


>AL139287-14|CAI23184.1|  852|Homo sapiens taste receptor, type 1,
           member 3 protein.
          Length = 852

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = -1

Query: 197 HLLRAYIVRTPLGNHLGYSSNSWMIFNEVIGLPGSLVLPTHLGLSEVGTS-EKFKDKTNT 21
           H L  Y + + L   +  +S +W+  + V+GLPG   + T LG  + G    +F     T
Sbjct: 281 HALFNYSISSRLSPKVWVASEAWLTSDLVMGLPGMAQMGTVLGFLQRGAQLHEFPQYVKT 340

Query: 20  HRPL 9
           H  L
Sbjct: 341 HLAL 344


>AB065647-1|BAC05873.1|  936|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 936

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = -1

Query: 197 HLLRAYIVRTPLGNHLGYSSNSWMIFNEVIGLPGSLVLPTHLGLSEVGTS-EKFKDKTNT 21
           H L  Y + + L   +  +S +W+  + V+GLPG   + T LG  + G    +F     T
Sbjct: 281 HALFNYSISSRLSPKVWVASEAWLTSDLVMGLPGMAQMGTVLGFLQRGAQLHEFPQYVKT 340

Query: 20  HRPL 9
           H  L
Sbjct: 341 HLAL 344


>BC132936-1|AAI32937.1|  189|Homo sapiens FLJ46836 protein protein.
          Length = 189

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
 Frame = -2

Query: 298 LDLFQRWSLMAFLIMV--FWPMSTML*PRNEIRICGICC 188
           LDLF  WS  A L        M T+  PRN +   G CC
Sbjct: 65  LDLFSVWSRSAMLAPAGSVLAMPTLRPPRNSVGDSGACC 103


>AL589653-1|CAI40809.1| 1560|Homo sapiens proprotein convertase
           subtilisin/kexin type 5 protein.
          Length = 1560

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +2

Query: 131 NCWTNTPNGFLVGCGQCRLATDATDPYFIAWSQHC 235
           NC T+ P+G+L+  G C++     D  ++    HC
Sbjct: 525 NC-TSCPSGYLLDLGMCQMGAICKDGEYVDEHGHC 558


>AL391868-1|CAI40675.1| 1560|Homo sapiens proprotein convertase
           subtilisin/kexin type 5 protein.
          Length = 1560

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +2

Query: 131 NCWTNTPNGFLVGCGQCRLATDATDPYFIAWSQHC 235
           NC T+ P+G+L+  G C++     D  ++    HC
Sbjct: 525 NC-TSCPSGYLLDLGMCQMGAICKDGEYVDEHGHC 558


>AL353607-3|CAI41234.1| 1560|Homo sapiens proprotein convertase
           subtilisin/kexin type 5 protein.
          Length = 1560

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +2

Query: 131 NCWTNTPNGFLVGCGQCRLATDATDPYFIAWSQHC 235
           NC T+ P+G+L+  G C++     D  ++    HC
Sbjct: 525 NC-TSCPSGYLLDLGMCQMGAICKDGEYVDEHGHC 558


>AK128673-1|BAC87564.1|  189|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46836 fis, clone UTERU2029660. ).
          Length = 189

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
 Frame = -2

Query: 298 LDLFQRWSLMAFLIMV--FWPMSTML*PRNEIRICGICC 188
           LDLF  WS  A L        M T+  PRN +   G CC
Sbjct: 65  LDLFSVWSRSAMLAPAGSVLAMPTLRPPRNSVGDSGACC 103


>BC034988-1|AAH34988.1| 1036|Homo sapiens ULK2 protein protein.
          Length = 1036

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -2

Query: 217 NEIRICGICCEPTLSAPH*ET 155
           NE  +CG  C+PT+S PH ET
Sbjct: 379 NEFLVCGGQCQPTVS-PHSET 398


>AB014523-1|BAA31598.2| 1100|Homo sapiens KIAA0623 protein protein.
          Length = 1100

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -2

Query: 217 NEIRICGICCEPTLSAPH*ET 155
           NE  +CG  C+PT+S PH ET
Sbjct: 443 NEFLVCGGQCQPTVS-PHSET 462


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,544,115
Number of Sequences: 237096
Number of extensions: 1198131
Number of successful extensions: 2468
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2430
length of database: 76,859,062
effective HSP length: 77
effective length of database: 58,602,670
effective search space used: 1347861410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -