Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_M04
         (302 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair pro...    79   1e-15
BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p pro...    79   1e-15
AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p pro...    79   1e-15
AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA...    79   1e-15
AE014296-1264|AAS65066.1|  404|Drosophila melanogaster CG33277-P...    28   2.0  
AY118362-1|AAM48391.1|  834|Drosophila melanogaster RE07883p pro...    28   2.6  
AE013599-2535|AAF57814.1|  858|Drosophila melanogaster CG4966-PA...    28   2.6  
AE013599-2533|AAG22260.1|  834|Drosophila melanogaster CG4966-PB...    28   2.6  
BT004503-1|AAO42667.1| 2201|Drosophila melanogaster GH07949p pro...    27   6.0  
AY061826-1|AAL27637.1|  388|Drosophila melanogaster GH21984p pro...    27   6.0  
AE014298-2947|AAF49026.2| 2529|Drosophila melanogaster CG32529-P...    27   6.0  
AE014296-3519|AAF51708.2|  388|Drosophila melanogaster CG7605-PA...    27   6.0  
AE014134-2514|AAF53406.2| 1025|Drosophila melanogaster CG12636-P...    27   6.0  
AE014298-754|AAF46045.1|  640|Drosophila melanogaster CG15780-PA...    26   8.0  

>M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair
           protein protein.
          Length = 317

 Score = 79.0 bits (186), Expect = 1e-15
 Identities = 41/72 (56%), Positives = 49/72 (68%)
 Frame = +3

Query: 75  MGREDKATWKSNYFVKNHPTVGRIPQMVS*WGADNVGSQQMPQIRISLRGHSIVLMGQNT 254
           M RE+KA WK+ YF+K        P+     GADNVGS+QM  IR SLRG ++VLMG+NT
Sbjct: 1   MVRENKAAWKAQYFIKVVELFDEFPKCFI-VGADNVGSKQMQNIRTSLRGLAVVLMGKNT 59

Query: 255 MMRKAINDHL*N 290
           MMRKAI  HL N
Sbjct: 60  MMRKAIRGHLEN 71


>BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p
           protein.
          Length = 317

 Score = 79.0 bits (186), Expect = 1e-15
 Identities = 41/72 (56%), Positives = 49/72 (68%)
 Frame = +3

Query: 75  MGREDKATWKSNYFVKNHPTVGRIPQMVS*WGADNVGSQQMPQIRISLRGHSIVLMGQNT 254
           M RE+KA WK+ YF+K        P+     GADNVGS+QM  IR SLRG ++VLMG+NT
Sbjct: 1   MVRENKAAWKAQYFIKVVELFDEFPKCFI-VGADNVGSKQMQNIRTSLRGLAVVLMGKNT 59

Query: 255 MMRKAINDHL*N 290
           MMRKAI  HL N
Sbjct: 60  MMRKAIRGHLEN 71


>AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p
           protein.
          Length = 317

 Score = 79.0 bits (186), Expect = 1e-15
 Identities = 41/72 (56%), Positives = 49/72 (68%)
 Frame = +3

Query: 75  MGREDKATWKSNYFVKNHPTVGRIPQMVS*WGADNVGSQQMPQIRISLRGHSIVLMGQNT 254
           M RE+KA WK+ YF+K        P+     GADNVGS+QM  IR SLRG ++VLMG+NT
Sbjct: 1   MVRENKAAWKAQYFIKVVELFDEFPKCFI-VGADNVGSKQMQNIRTSLRGLAVVLMGKNT 59

Query: 255 MMRKAINDHL*N 290
           MMRKAI  HL N
Sbjct: 60  MMRKAIRGHLEN 71


>AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA
           protein.
          Length = 317

 Score = 79.0 bits (186), Expect = 1e-15
 Identities = 41/72 (56%), Positives = 49/72 (68%)
 Frame = +3

Query: 75  MGREDKATWKSNYFVKNHPTVGRIPQMVS*WGADNVGSQQMPQIRISLRGHSIVLMGQNT 254
           M RE+KA WK+ YF+K        P+     GADNVGS+QM  IR SLRG ++VLMG+NT
Sbjct: 1   MVRENKAAWKAQYFIKVVELFDEFPKCFI-VGADNVGSKQMQNIRTSLRGLAVVLMGKNT 59

Query: 255 MMRKAINDHL*N 290
           MMRKAI  HL N
Sbjct: 60  MMRKAIRGHLEN 71


>AE014296-1264|AAS65066.1|  404|Drosophila melanogaster CG33277-PA
           protein.
          Length = 404

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +2

Query: 203 DPYFIAWSQHCAHGPKHHDEESHQRPSLKQIQL 301
           +PY +  +   AH  +H  ++ HQ+P L+ + L
Sbjct: 303 EPYPVGAAAFAAHQQQHQHQQQHQQPLLQPLTL 335


>AY118362-1|AAM48391.1|  834|Drosophila melanogaster RE07883p
           protein.
          Length = 834

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +1

Query: 28  VLSLNFSEVPTSLNPRWVGRTRLPGSPITSLKII 129
           + S+NF E  T   P+++GRT +  +P+T  K++
Sbjct: 339 IASINFDE--TDSYPQFIGRTSVCNTPMTENKVL 370


>AE013599-2535|AAF57814.1|  858|Drosophila melanogaster CG4966-PA,
           isoform A protein.
          Length = 858

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +1

Query: 28  VLSLNFSEVPTSLNPRWVGRTRLPGSPITSLKII 129
           + S+NF E  T   P+++GRT +  +P+T  K++
Sbjct: 363 IASINFDE--TDSYPQFIGRTSVCNTPMTENKVL 394


>AE013599-2533|AAG22260.1|  834|Drosophila melanogaster CG4966-PB,
           isoform B protein.
          Length = 834

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +1

Query: 28  VLSLNFSEVPTSLNPRWVGRTRLPGSPITSLKII 129
           + S+NF E  T   P+++GRT +  +P+T  K++
Sbjct: 339 IASINFDE--TDSYPQFIGRTSVCNTPMTENKVL 370


>BT004503-1|AAO42667.1| 2201|Drosophila melanogaster GH07949p
           protein.
          Length = 2201

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 224 SQHCAHGPKHHDEESHQRP 280
           S  CA  P HH +  HQ+P
Sbjct: 914 SAFCAPSPLHHHQHQHQQP 932


>AY061826-1|AAL27637.1|  388|Drosophila melanogaster GH21984p
           protein.
          Length = 388

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 239 HGPKHHDEESHQRPS 283
           H P HH + SH +PS
Sbjct: 86  HNPSHHHQSSHHQPS 100


>AE014298-2947|AAF49026.2| 2529|Drosophila melanogaster CG32529-PA,
            isoform A protein.
          Length = 2529

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 224  SQHCAHGPKHHDEESHQRP 280
            S  CA  P HH +  HQ+P
Sbjct: 1242 SAFCAPSPLHHHQHQHQQP 1260


>AE014296-3519|AAF51708.2|  388|Drosophila melanogaster CG7605-PA
           protein.
          Length = 388

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 239 HGPKHHDEESHQRPS 283
           H P HH + SH +PS
Sbjct: 86  HNPSHHHQSSHHQPS 100


>AE014134-2514|AAF53406.2| 1025|Drosophila melanogaster CG12636-PA
           protein.
          Length = 1025

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 36  LKFLRSPYFTQSKMGREDKATW 101
           ++F+RS YFT     R  K TW
Sbjct: 891 IQFMRSKYFTYGNYSRYPKYTW 912


>AE014298-754|AAF46045.1|  640|Drosophila melanogaster CG15780-PA
           protein.
          Length = 640

 Score = 26.2 bits (55), Expect = 8.0
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 78  GREDKATWKSNYFVKNHPTVG 140
           G ED A    N+  +NHPT+G
Sbjct: 335 GNEDMAQDPPNFAFENHPTIG 355


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,614,501
Number of Sequences: 53049
Number of extensions: 362720
Number of successful extensions: 1313
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1309
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 570126357
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)