Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_M04
         (302 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     23   0.83 
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   1.1  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   1.1  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   1.1  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    22   1.4  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    22   1.4  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         21   2.5  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   2.5  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   2.5  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    21   2.5  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    21   2.5  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   3.3  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    21   3.3  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   3.3  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    21   3.3  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   4.4  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           21   4.4  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   4.4  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    20   7.7  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    20   7.7  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    20   7.7  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    20   7.7  

>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 23.0 bits (47), Expect = 0.83
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = +3

Query: 105 SNYFVKNHPTVGRIPQMVS*WGADNVGSQQMPQIRISLRGHSI 233
           S  FV        +P++   WG  N+  ++ P+    +R H+I
Sbjct: 89  SRLFVIRGQPADALPKLFKEWGTTNLTFEEDPEPFGRVRDHNI 131


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 72  KMGREDKATWKSNYFVKNHPTV 137
           K+G E+KA W  +  + N  T+
Sbjct: 332 KLGEEEKADWWKDIMLLNEKTL 353


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 72  KMGREDKATWKSNYFVKNHPTV 137
           K+G E+KA W  +  + N  T+
Sbjct: 332 KLGEEEKADWWKDIMLLNEKTL 353


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 72  KMGREDKATWKSNYFVKNHPTV 137
           K+G E+KA W  +  + N  T+
Sbjct: 332 KLGEEEKADWWKDIMLLNEKTL 353


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 22.2 bits (45), Expect = 1.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 149 GYSSNSWMIFNEV 111
           G+ SNSW+  NE+
Sbjct: 305 GFPSNSWVAINEL 317


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 22.2 bits (45), Expect = 1.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 149 GYSSNSWMIFNEV 111
           G+ SNSW+  NE+
Sbjct: 273 GFPSNSWVAINEL 285


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 22  VFVLSLNFSEVPTSLN 69
           +FV  L ++ VP+SLN
Sbjct: 76  IFVTMLRYNGVPSSLN 91


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 7   GRGLCVFVLSLNFSEVPTSLNPRWVGRTRLPG 102
           G  +C+   +   + V  +L+ R V  TR+PG
Sbjct: 280 GVSICLVTFASALAVVTLNLHHRGVRGTRVPG 311


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 25  FVLSLNFSEVPTSLN 69
           FV+ + F+ VP+SLN
Sbjct: 75  FVIIMKFNGVPSSLN 89


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 22  VFVLSLNFSEVPTSLN 69
           +FV  L ++ VP+SLN
Sbjct: 76  IFVTMLRYNGVPSSLN 91


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 22  VFVLSLNFSEVPTSLN 69
           +FV  L ++ VP+SLN
Sbjct: 76  IFVTMLRYNGVPSSLN 91


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 8/23 (34%), Positives = 9/23 (39%)
 Frame = -3

Query: 228 CDHAMKYGSVASVASLHCPHPTR 160
           C H    G  A +     PHP R
Sbjct: 435 CTHTTTNGCTAELRKKEPPHPIR 457


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 8/23 (34%), Positives = 9/23 (39%)
 Frame = -3

Query: 228 CDHAMKYGSVASVASLHCPHPTR 160
           C H    G  A +     PHP R
Sbjct: 421 CTHTTTNGCTAELRKKEPPHPIR 443


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 8/23 (34%), Positives = 9/23 (39%)
 Frame = -3

Query: 228 CDHAMKYGSVASVASLHCPHPTR 160
           C H    G  A +     PHP R
Sbjct: 455 CTHTTTNGCTAELRKKEPPHPIR 477


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 8/23 (34%), Positives = 9/23 (39%)
 Frame = -3

Query: 228 CDHAMKYGSVASVASLHCPHPTR 160
           C H    G  A +     PHP R
Sbjct: 404 CTHTTTNGCTAELRKKEPPHPIR 426


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 4.4
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +2

Query: 131 NCWTNTPN 154
           NCWT T N
Sbjct: 240 NCWTQTEN 247



 Score = 20.2 bits (40), Expect = 5.8
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -1

Query: 200 WHLLRAYIVRTPLGNHLGY 144
           W L  A  V+TPLG   GY
Sbjct: 17  WTLEDAPRVKTPLGAIKGY 35


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 20.6 bits (41), Expect = 4.4
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +2

Query: 131 NCWTNTPN 154
           NCWT T N
Sbjct: 111 NCWTQTEN 118


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 4.4
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +2

Query: 131 NCWTNTPN 154
           NCWT T N
Sbjct: 240 NCWTQTEN 247



 Score = 20.2 bits (40), Expect = 5.8
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -1

Query: 200 WHLLRAYIVRTPLGNHLGY 144
           W L  A  V+TPLG   GY
Sbjct: 17  WTLEDAPRVKTPLGAIKGY 35


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = +2

Query: 131 NCWTNTPNGFLVGCGQCRLATDATD 205
           NC ++  +  +V  G+C  A D  +
Sbjct: 157 NCTSSIASSGVVSAGECGPAADVDE 181


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 5/13 (38%), Positives = 8/13 (61%)
 Frame = -1

Query: 263 PHHGVLAHEHNAV 225
           PHH  + H H+ +
Sbjct: 414 PHHHTMGHGHSHI 426


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = +1

Query: 196 CHRSVFHCVVTALCSWAK 249
           C++   + +V A+C++AK
Sbjct: 323 CYKYYGNIMVNAMCAYAK 340


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 33  VLKFLRSPYFTQSKM 77
           +LKFL+  Y   SK+
Sbjct: 343 ILKFLKQKYVKNSKL 357


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,407
Number of Sequences: 438
Number of extensions: 2243
Number of successful extensions: 25
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6368931
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)