BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_M03
(626 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT004490-1|AAO42654.1| 819|Drosophila melanogaster LD22449p pro... 190 1e-48
AE014296-2160|AAF49900.1| 819|Drosophila melanogaster CG10620-P... 190 1e-48
AF061268-1|AAC67389.1| 641|Drosophila melanogaster transferrin ... 39 0.005
AE014298-2709|AAF48831.1| 641|Drosophila melanogaster CG6186-PA... 39 0.006
AY060694-1|AAL28242.1| 384|Drosophila melanogaster GH13735p pro... 36 0.034
AE013599-2223|AAF58039.1| 714|Drosophila melanogaster CG3666-PA... 36 0.034
L25314-1|AAA17685.1| 398|Drosophila melanogaster actin-related ... 32 0.73
AY058726-1|AAL13955.1| 398|Drosophila melanogaster LD47054p pro... 32 0.73
AE014298-2201|AAF48499.1| 398|Drosophila melanogaster CG11678-P... 32 0.73
AE014296-861|AAF47911.2| 456|Drosophila melanogaster CG11350-PB... 30 2.2
EF428975-1|ABO20847.1| 2381|Drosophila melanogaster Kon-tiki pro... 28 9.0
AE014134-2938|AAF53672.2| 2355|Drosophila melanogaster CG10275-P... 28 9.0
>BT004490-1|AAO42654.1| 819|Drosophila melanogaster LD22449p
protein.
Length = 819
Score = 190 bits (463), Expect = 1e-48
Identities = 82/137 (59%), Positives = 99/137 (72%)
Frame = +3
Query: 198 AAFLSPELVCWRAHSTRHCERAIADGASDFALFDAADMLHAAYRHRLVPFMQEVYSSGES 377
A L PEL+C + HS +C + I G +D ++FDA D+ + LVPFM EVY+ GE
Sbjct: 472 AHLLKPELICKKMHSHINCMQFIEAGKADISVFDAGDVYTGGLNYDLVPFMSEVYNLGEP 531
Query: 378 WYYAVAVAKEQDPDTDITYLRGKNTCHTGLGMAAGWVYPLAYLISNGWIRPYACDGAHAA 557
YY VAVAKE DPDT++TYL+GKNTCHTG+ AAGW YP+A ISNGWIRPY CD AA
Sbjct: 532 EYYVVAVAKEDDPDTELTYLKGKNTCHTGINTAAGWTYPMALFISNGWIRPYGCDSVRAA 591
Query: 558 AEYFTKSCAPGALGSEY 608
AEYFTKSC PGA+ +EY
Sbjct: 592 AEYFTKSCVPGAISNEY 608
Score = 69.7 bits (163), Expect = 3e-12
Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 3/133 (2%)
Frame = +3
Query: 219 LVCWRAHSTRHCERAIADGASDFALFDAADMLHAAYRHRLVPFMQEVYSSGESWYYAVAV 398
L C+ A+S C I + DA D+ A + L+P MQE G + Y +VAV
Sbjct: 67 LTCFMAYSADECIHHIDREKAHITTLDAGDVFTAGRYNSLIPIMQEKLEGGFADYQSVAV 126
Query: 399 AKEQD-PD-TDITYLRGKNTCHTGLGMAAGWVYPLAYLISNGWIRPYACDG-AHAAAEYF 569
K+ PD ++ +R K C +G AGW+ P+ L G + C+ AA YF
Sbjct: 127 IKKGSLPDLNNLRDMRNKRVCFPWVGSLAGWIVPIHTLQREGGMEVVDCNNQVKTAASYF 186
Query: 570 TKSCAPGALGSEY 608
SCA +L ++
Sbjct: 187 NNSCAVYSLSDKH 199
Score = 29.5 bits (63), Expect = 3.9
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 97 VLSIRDCPVKRAVLCVTSDPEI 162
+ IR+CPV LCVTS+ E+
Sbjct: 439 IYGIRECPVPAMTLCVTSENEL 460
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 158 KLDKCVKMRIALKCSLPVP 214
+LDKC+KMR ALK L P
Sbjct: 459 ELDKCIKMRTALKAHLLKP 477
>AE014296-2160|AAF49900.1| 819|Drosophila melanogaster CG10620-PA
protein.
Length = 819
Score = 190 bits (463), Expect = 1e-48
Identities = 82/137 (59%), Positives = 99/137 (72%)
Frame = +3
Query: 198 AAFLSPELVCWRAHSTRHCERAIADGASDFALFDAADMLHAAYRHRLVPFMQEVYSSGES 377
A L PEL+C + HS +C + I G +D ++FDA D+ + LVPFM EVY+ GE
Sbjct: 472 AHLLKPELICKKMHSHINCMQFIEAGKADISVFDAGDVYTGGLNYDLVPFMSEVYNLGEP 531
Query: 378 WYYAVAVAKEQDPDTDITYLRGKNTCHTGLGMAAGWVYPLAYLISNGWIRPYACDGAHAA 557
YY VAVAKE DPDT++TYL+GKNTCHTG+ AAGW YP+A ISNGWIRPY CD AA
Sbjct: 532 EYYVVAVAKEDDPDTELTYLKGKNTCHTGINTAAGWTYPMALFISNGWIRPYGCDSVRAA 591
Query: 558 AEYFTKSCAPGALGSEY 608
AEYFTKSC PGA+ +EY
Sbjct: 592 AEYFTKSCVPGAISNEY 608
Score = 69.7 bits (163), Expect = 3e-12
Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 3/133 (2%)
Frame = +3
Query: 219 LVCWRAHSTRHCERAIADGASDFALFDAADMLHAAYRHRLVPFMQEVYSSGESWYYAVAV 398
L C+ A+S C I + DA D+ A + L+P MQE G + Y +VAV
Sbjct: 67 LTCFMAYSADECIHHIDREKAHITTLDAGDVFTAGRYNSLIPIMQEKLEGGFADYQSVAV 126
Query: 399 AKEQD-PD-TDITYLRGKNTCHTGLGMAAGWVYPLAYLISNGWIRPYACDG-AHAAAEYF 569
K+ PD ++ +R K C +G AGW+ P+ L G + C+ AA YF
Sbjct: 127 IKKGSLPDLNNLRDMRNKRVCFPWVGSLAGWIVPIHTLQREGGMEVVDCNNQVKTAASYF 186
Query: 570 TKSCAPGALGSEY 608
SCA +L ++
Sbjct: 187 NNSCAVYSLSDKH 199
Score = 29.5 bits (63), Expect = 3.9
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 97 VLSIRDCPVKRAVLCVTSDPEI 162
+ IR+CPV LCVTS+ E+
Sbjct: 439 IYGIRECPVPAMTLCVTSENEL 460
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 158 KLDKCVKMRIALKCSLPVP 214
+LDKC+KMR ALK L P
Sbjct: 459 ELDKCIKMRTALKAHLLKP 477
>AF061268-1|AAC67389.1| 641|Drosophila melanogaster transferrin
precursor protein.
Length = 641
Score = 39.1 bits (87), Expect = 0.005
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 13/126 (10%)
Frame = +3
Query: 252 CERAIADGASDFALFDAADMLHAAYR----HRLVPFMQEVYSSGESWYY-AVAVAKEQDP 416
C I +D + DM A +R +R++ ++ ++ Y + + K+ P
Sbjct: 71 CLELIEQRKADVLATEPEDMYIAYHRKNEDYRVISEIRTQQDKNAAFRYEGIILVKKDSP 130
Query: 417 DTDITYLRGKNTCHTGLGMAAGWVYPLAYLISNGWIRPYACDGAHAA--------AEYFT 572
+ LRG +CHTG G G+ P+ L N + + D +A +E+FT
Sbjct: 131 IRTLQQLRGAKSCHTGFGRNVGYKIPITKL-KNTHVLKVSADPQISATERELKSLSEFFT 189
Query: 573 KSCAPG 590
+SC G
Sbjct: 190 QSCLVG 195
>AE014298-2709|AAF48831.1| 641|Drosophila melanogaster CG6186-PA
protein.
Length = 641
Score = 38.7 bits (86), Expect = 0.006
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Frame = +3
Query: 381 YYAVAVAKEQDPDTDITYLRGKNTCHTGLGMAAGWVYPLAYLISNGWIRPYACDGAHAA- 557
Y + + K+ P + LRG +CHTG G G+ P+ L N + + D +A
Sbjct: 119 YEGIILVKKDSPIRTLQQLRGAKSCHTGFGRNVGYKIPITKL-KNTHVLKVSADPQISAT 177
Query: 558 -------AEYFTKSCAPG 590
+E+FT+SC G
Sbjct: 178 ERELKSLSEFFTQSCLVG 195
>AY060694-1|AAL28242.1| 384|Drosophila melanogaster GH13735p
protein.
Length = 384
Score = 36.3 bits (80), Expect = 0.034
Identities = 28/122 (22%), Positives = 45/122 (36%), Gaps = 9/122 (7%)
Frame = +3
Query: 252 CERAIADGASDFALFDAADMLHAAYRHRLVPFMQEVYSSGESWYYAVAVAKEQDPDTDIT 431
C R I G + F + + D++ A + + E+ S + Y + + +
Sbjct: 70 CVRRIHKGTAHFGVLTSEDLVAARWASVEILVASELRSHESHFEYEIVAVVDNHANIHTV 129
Query: 432 Y-LRGKNTCHTGLGMAAGWVYPLAYLISNGWIRPYAC--------DGAHAAAEYFTKSCA 584
+ LRG CH G G+ W LA + C D + A+YF SC
Sbjct: 130 HDLRGARLCHPGYGLGNHWTEVLANYFEAAMVSK-TCDPEMTVTEDRIASTAKYFGPSCK 188
Query: 585 PG 590
G
Sbjct: 189 AG 190
>AE013599-2223|AAF58039.1| 714|Drosophila melanogaster CG3666-PA
protein.
Length = 714
Score = 36.3 bits (80), Expect = 0.034
Identities = 28/122 (22%), Positives = 45/122 (36%), Gaps = 9/122 (7%)
Frame = +3
Query: 252 CERAIADGASDFALFDAADMLHAAYRHRLVPFMQEVYSSGESWYYAVAVAKEQDPDTDIT 431
C R I G + F + + D++ A + + E+ S + Y + + +
Sbjct: 70 CVRRIHKGTAHFGVLTSEDLVAARWASVEILVASELRSHESHFEYEIVAVVDNHANIHTV 129
Query: 432 Y-LRGKNTCHTGLGMAAGWVYPLAYLISNGWIRPYAC--------DGAHAAAEYFTKSCA 584
+ LRG CH G G+ W LA + C D + A+YF SC
Sbjct: 130 HDLRGARLCHPGYGLGNHWTEVLANYFEAAMVSK-TCDPEMTVTEDRIASTAKYFGPSCK 188
Query: 585 PG 590
G
Sbjct: 189 AG 190
>L25314-1|AAA17685.1| 398|Drosophila melanogaster actin-related
protein protein.
Length = 398
Score = 31.9 bits (69), Expect = 0.73
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 7/122 (5%)
Frame = -1
Query: 392 DCIVPAFTARVHLLHEGHQPVPVRCVQHVRGVEQREVRGTVRNSAFTVPRAVRAPADQLR 213
D ++P FT + G+ VP + R E+++ ++ N FTVP + P+D
Sbjct: 243 DYVLPDFTT----VKRGYVRVPGK----PREDEEQQQMVSLCNERFTVPELLFNPSDIGV 294
Query: 212 GQEGCTSTLSSF*RICP-------ISGSLVTQSTARFTGQSRMLSTALSAWVPDVICYSN 54
Q G ++ + CP + L+ +A+F G L L A VPD + S
Sbjct: 295 QQVGIPEAVADCLKACPWEAHRELLLNILIVGGSAQFPGFLPRLKRDLRALVPDDLEVSL 354
Query: 53 IC 48
IC
Sbjct: 355 IC 356
>AY058726-1|AAL13955.1| 398|Drosophila melanogaster LD47054p
protein.
Length = 398
Score = 31.9 bits (69), Expect = 0.73
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 7/122 (5%)
Frame = -1
Query: 392 DCIVPAFTARVHLLHEGHQPVPVRCVQHVRGVEQREVRGTVRNSAFTVPRAVRAPADQLR 213
D ++P FT + G+ VP + R E+++ ++ N FTVP + P+D
Sbjct: 243 DYVLPDFTT----VKRGYVRVPGK----PREDEEQQQMVSLCNERFTVPELLFNPSDIGV 294
Query: 212 GQEGCTSTLSSF*RICP-------ISGSLVTQSTARFTGQSRMLSTALSAWVPDVICYSN 54
Q G ++ + CP + L+ +A+F G L L A VPD + S
Sbjct: 295 QQVGIPEAVADCLKACPWEAHRELLLNILIVGGSAQFPGFLPRLKRDLRALVPDDLEVSL 354
Query: 53 IC 48
IC
Sbjct: 355 IC 356
>AE014298-2201|AAF48499.1| 398|Drosophila melanogaster CG11678-PA
protein.
Length = 398
Score = 31.9 bits (69), Expect = 0.73
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 7/122 (5%)
Frame = -1
Query: 392 DCIVPAFTARVHLLHEGHQPVPVRCVQHVRGVEQREVRGTVRNSAFTVPRAVRAPADQLR 213
D ++P FT + G+ VP + R E+++ ++ N FTVP + P+D
Sbjct: 243 DYVLPDFTT----VKRGYVRVPGK----PREDEEQQQMVSLCNERFTVPELLFNPSDIGV 294
Query: 212 GQEGCTSTLSSF*RICP-------ISGSLVTQSTARFTGQSRMLSTALSAWVPDVICYSN 54
Q G ++ + CP + L+ +A+F G L L A VPD + S
Sbjct: 295 QQVGIPEAVADCLKACPWEAHRELLLNILIVGGSAQFPGFLPRLKRDLRALVPDDLEVSL 354
Query: 53 IC 48
IC
Sbjct: 355 IC 356
>AE014296-861|AAF47911.2| 456|Drosophila melanogaster CG11350-PB
protein.
Length = 456
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 619 PESTYSEPSAPGAQDLVKYSAAACAPSHAY 530
P TYS P+ A+ Y AA AP+H++
Sbjct: 264 PAQTYSAPAVSYAEPAESYETAASAPAHSF 293
>EF428975-1|ABO20847.1| 2381|Drosophila melanogaster Kon-tiki
protein.
Length = 2381
Score = 28.3 bits (60), Expect = 9.0
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = -1
Query: 578 GLSEIFRCGMCAVTCVWPYPSVGYKICQGINPTGSHTQSGVASVFPT*IRDICIRVLFFG 399
G +E+ A+ C+W YP V Y C +G +Q GV + CI+ F G
Sbjct: 370 GFAEMTISRSLALNCLWKYPCVEYNPCL---KSGICSQHGVDGFICYCDQSYCIKADFQG 426
>AE014134-2938|AAF53672.2| 2355|Drosophila melanogaster CG10275-PA
protein.
Length = 2355
Score = 28.3 bits (60), Expect = 9.0
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = -1
Query: 578 GLSEIFRCGMCAVTCVWPYPSVGYKICQGINPTGSHTQSGVASVFPT*IRDICIRVLFFG 399
G +E+ A+ C+W YP V Y C +G +Q GV + CI+ F G
Sbjct: 344 GFAEMTISRSLALNCLWKYPCVEYNPCL---KSGICSQHGVDGFICYCDQSYCIKADFQG 400
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,678,299
Number of Sequences: 53049
Number of extensions: 785409
Number of successful extensions: 2464
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2462
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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