Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_M03
(626 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 64 8e-13
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 64 8e-13
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 64 8e-13
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 23 1.8
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 22 4.3
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 22 4.3
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 22 5.6
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 22 5.6
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 22 5.6
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 21 7.4
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 21 7.4
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 21 9.8
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 21 9.8
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 9.8
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 64.5 bits (150), Expect = 8e-13
Identities = 41/131 (31%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Frame = +3
Query: 213 PELVCWRAHSTRHCERAIADGASDFALFDAADMLHAAYRHRLVPFMQEVYSSGESWYY-- 386
P+ C S C +AI + +D + +L A + VP + E Y SG + +
Sbjct: 413 PKYDCTLEKSQDDCLKAIKENNADLTVVSGGSVLRATKEYNTVPIIAESYGSGSTNFNER 472
Query: 387 -AVAVAKEQDPDTDITYLRGKNTCHTGLGMA-AGWVYPLAYLISNGWIRPYACDGAHAAA 560
AVAV + + LR K +CH+G + AGW P+ L G I+ + AA
Sbjct: 473 PAVAVVSKSSSINKLEDLRNKKSCHSGYKDSFAGWTAPIYTLKRKGLIK-----SENEAA 527
Query: 561 EYFTKSCAPGA 593
++F+ SCAPGA
Sbjct: 528 DFFSGSCAPGA 538
Score = 38.7 bits (86), Expect = 5e-05
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +3
Query: 381 YYAVAVAKEQDPDTDITYLRGKNTCHTGLGMAAGWVYPLAYLISNG 518
Y AVAV + P ++ LRG +CHTG+G G+ P+ L + G
Sbjct: 123 YEAVAVIHKDLPINNVQGLRGLKSCHTGVGRNVGYKIPITKLTAMG 168
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 64.5 bits (150), Expect = 8e-13
Identities = 41/131 (31%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Frame = +3
Query: 213 PELVCWRAHSTRHCERAIADGASDFALFDAADMLHAAYRHRLVPFMQEVYSSGESWYY-- 386
P+ C S C +AI + +D + +L A + VP + E Y SG + +
Sbjct: 413 PKYDCTLEKSQDDCLKAIKENNADLTVVSGGSVLRATKEYNTVPIIAESYGSGSTNFNER 472
Query: 387 -AVAVAKEQDPDTDITYLRGKNTCHTGLGMA-AGWVYPLAYLISNGWIRPYACDGAHAAA 560
AVAV + + LR K +CH+G + AGW P+ L G I+ + AA
Sbjct: 473 PAVAVVSKSSSINKLEDLRNKKSCHSGYKDSFAGWTAPIYTLKRKGLIK-----SENEAA 527
Query: 561 EYFTKSCAPGA 593
++F+ SCAPGA
Sbjct: 528 DFFSGSCAPGA 538
Score = 38.7 bits (86), Expect = 5e-05
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +3
Query: 381 YYAVAVAKEQDPDTDITYLRGKNTCHTGLGMAAGWVYPLAYLISNG 518
Y AVAV + P ++ LRG +CHTG+G G+ P+ L + G
Sbjct: 123 YEAVAVIHKDLPINNVQGLRGLKSCHTGVGRNVGYKIPITKLTAMG 168
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 64.5 bits (150), Expect = 8e-13
Identities = 41/131 (31%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Frame = +3
Query: 213 PELVCWRAHSTRHCERAIADGASDFALFDAADMLHAAYRHRLVPFMQEVYSSGESWYY-- 386
P+ C S C +AI + +D + +L A + VP + E Y SG + +
Sbjct: 413 PKYDCTLEKSQDDCLKAIKENNADLTVVSGGSVLRATKEYNTVPIIAESYGSGSTNFNER 472
Query: 387 -AVAVAKEQDPDTDITYLRGKNTCHTGLGMA-AGWVYPLAYLISNGWIRPYACDGAHAAA 560
AVAV + + LR K +CH+G + AGW P+ L G I+ + AA
Sbjct: 473 PAVAVVSKSSSINKLEDLRNKKSCHSGYKDSFAGWTAPIYTLKRKGLIK-----SENEAA 527
Query: 561 EYFTKSCAPGA 593
++F+ SCAPGA
Sbjct: 528 DFFSGSCAPGA 538
Score = 38.7 bits (86), Expect = 5e-05
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +3
Query: 381 YYAVAVAKEQDPDTDITYLRGKNTCHTGLGMAAGWVYPLAYLISNG 518
Y AVAV + P ++ LRG +CHTG+G G+ P+ L + G
Sbjct: 123 YEAVAVIHKDLPINNVQGLRGLKSCHTGVGRNVGYKIPITKLTAMG 168
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 23.4 bits (48), Expect = 1.8
Identities = 7/26 (26%), Positives = 15/26 (57%)
Frame = -1
Query: 131 ARFTGQSRMLSTALSAWVPDVICYSN 54
A + G + + + W+PD++ Y+N
Sbjct: 87 AEYGGVTELYVPSEHIWLPDIVLYNN 112
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 22.2 bits (45), Expect = 4.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = +2
Query: 425 YHVFTWEKHLPHRT 466
+ + W KH+PH T
Sbjct: 243 FQLVAWAKHIPHFT 256
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 22.2 bits (45), Expect = 4.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = +2
Query: 425 YHVFTWEKHLPHRT 466
+ + W KH+PH T
Sbjct: 243 FQLVAWAKHIPHFT 256
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 21.8 bits (44), Expect = 5.6
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -3
Query: 192 NAILILTHLSNFGIAGNTEHCALHR 118
N +L L + N GIA EH L R
Sbjct: 317 NGVLFLGLVGNSGIACVNEHQVLQR 341
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.8 bits (44), Expect = 5.6
Identities = 5/10 (50%), Positives = 9/10 (90%)
Frame = -1
Query: 83 WVPDVICYSN 54
W+PD++ Y+N
Sbjct: 103 WLPDIVLYNN 112
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.8 bits (44), Expect = 5.6
Identities = 5/10 (50%), Positives = 9/10 (90%)
Frame = -1
Query: 83 WVPDVICYSN 54
W+PD++ Y+N
Sbjct: 116 WLPDIVLYNN 125
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 21.4 bits (43), Expect = 7.4
Identities = 8/32 (25%), Positives = 17/32 (53%)
Frame = -1
Query: 152 SLVTQSTARFTGQSRMLSTALSAWVPDVICYS 57
S +T ++ F + + + WVPD++ +S
Sbjct: 93 SHLTWKSSEFDSINSIRVKSYEIWVPDIVMHS 124
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 21.4 bits (43), Expect = 7.4
Identities = 12/42 (28%), Positives = 17/42 (40%)
Frame = +3
Query: 312 LHAAYRHRLVPFMQEVYSSGESWYYAVAVAKEQDPDTDITYL 437
LHA+ H L E Y + W V E++ +I L
Sbjct: 256 LHASLNHTLTKDQPETYELVKEWRDFVDNYAEENKRDEIVLL 297
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -2
Query: 622 VPESTYSEPSAPGAQDLVKYSAAACAP 542
+P S EPS A + S AC+P
Sbjct: 368 IPLSAIPEPSKNPAMGHWQMSCVACSP 394
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 21.0 bits (42), Expect = 9.8
Identities = 5/9 (55%), Positives = 8/9 (88%)
Frame = +1
Query: 496 WHILYPTDG 522
WH++YP +G
Sbjct: 212 WHLVYPFEG 220
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = -1
Query: 398 HRDCIVPAFTARVHLLHEGHQP 333
H D + P VH+ EG P
Sbjct: 649 HNDLMSPLDEPAVHIKQEGQSP 670
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,822
Number of Sequences: 438
Number of extensions: 4922
Number of successful extensions: 23
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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